RNA–Protein interactions for RNA: ENST00000480362.5

UPF3A-206, Transcript of UPF3A, regulator of nonsense mediated mRNA decay, humanhuman

TSL 5

Gene UPF3A, Length 965 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3A-206ENST00000480362 WFDC2Q14508 124 aa11.56□□□□□ -0.56
UPF3A-206ENST00000480362 DNAH6Q9C0G6 4158 aa11.55□□□□□ -0.56
UPF3A-206ENST00000480362 A0A0J9YXY3 114 aa11.54□□□□□ -0.56
UPF3A-206ENST00000480362 LRCOL1A6NCL2 159 aa11.54□□□□□ -0.56
UPF3A-206ENST00000480362 HERV-K104P63124 156 aa11.54□□□□□ -0.56
UPF3A-206ENST00000480362 SFTA2Q6UW10 78 aa11.54□□□□□ -0.56
UPF3A-206ENST00000480362 UNQ6190/PRO20217Q6UXQ8 127 aa11.54□□□□□ -0.56
UPF3A-206ENST00000480362 SCGB1D4Q6XE38 83 aa11.54□□□□□ -0.56
UPF3A-206ENST00000480362 C2orf48Q96LS8 159 aa11.54□□□□□ -0.56
UPF3A-206ENST00000480362 C10orf25Q5T742 122 aa11.53□□□□□ -0.56
UPF3A-206ENST00000480362 CAMK2N2Q96S95 79 aa11.53□□□□□ -0.56
UPF3A-206ENST00000480362 C2orf91Q6ZV80 131 aa11.52□□□□□ -0.57
UPF3A-206ENST00000480362 F8WDY8 70 aa11.51□□□□□ -0.57
UPF3A-206ENST00000480362 C14orf177Q52M58 125 aa11.51□□□□□ -0.57
UPF3A-206ENST00000480362 KMT2AQ03164 3969 aa11.51□□□□□ -0.57
UPF3A-206ENST00000480362 HNRNPA3P51991 378 aaKnown RBP11.5□□□□□ -0.57
UPF3A-206ENST00000480362 SYCNQ0VAF6 134 aa11.5□□□□□ -0.57
UPF3A-206ENST00000480362 MEIG1Q5JSS6 88 aa11.5□□□□□ -0.57
UPF3A-206ENST00000480362 SLPIP03973 132 aa11.49□□□□□ -0.57
UPF3A-206ENST00000480362 Q6ZRU5 148 aa11.49□□□□□ -0.57
UPF3A-206ENST00000480362 HIGD1BQ9P298 99 aa11.49□□□□□ -0.57
UPF3A-206ENST00000480362 A0A087WTM6 91 aa11.48□□□□□ -0.57
UPF3A-206ENST00000480362 A0A0U1RRA0 63 aa11.48□□□□□ -0.57
UPF3A-206ENST00000480362 PCP4L1A6NKN8 68 aa11.48□□□□□ -0.57
UPF3A-206ENST00000480362 SMIM13P0DJ93 91 aa11.48□□□□□ -0.57
UPF3A-206ENST00000480362 CIRBPQ14011 172 aaKnown RBP11.48□□□□□ -0.57
UPF3A-206ENST00000480362 C6orf48Q9UBA6 75 aa11.48□□□□□ -0.57
UPF3A-206ENST00000480362 TRBV30A0A0K0K1B3 111 aa11.47□□□□□ -0.57
UPF3A-206ENST00000480362 RTL8CO15255 209 aa11.47□□□□□ -0.57
UPF3A-206ENST00000480362 DDTP30046 118 aa11.47□□□□□ -0.57
UPF3A-206ENST00000480362 PFN2P35080 140 aa11.47□□□□□ -0.57
UPF3A-206ENST00000480362 C9orf116Q5BN46 136 aaPredicted RBP11.47□□□□□ -0.57
UPF3A-206ENST00000480362 ERG28Q9UKR5 140 aa11.47□□□□□ -0.57
UPF3A-206ENST00000480362 LINC00587B1AMM8 73 aa11.46□□□□□ -0.57
UPF3A-206ENST00000480362 TIMM17BO60830 172 aa11.46□□□□□ -0.57
UPF3A-206ENST00000480362 LINC00158P58513 81 aa11.46□□□□□ -0.57
UPF3A-206ENST00000480362 ADAMTSL4-AS1Q5T5F5 129 aa11.46□□□□□ -0.57
UPF3A-206ENST00000480362 CARD19Q96LW7 228 aa11.46□□□□□ -0.57
UPF3A-206ENST00000480362 LITAFQ99732 161 aa11.46□□□□□ -0.57
UPF3A-206ENST00000480362 IGLV2-33A0A075B6J2 118 aaPredicted RBP11.45□□□□□ -0.58
UPF3A-206ENST00000480362 TMEM238C9JI98 176 aa11.45□□□□□ -0.58
UPF3A-206ENST00000480362 Q8N814 137 aa11.45□□□□□ -0.58
UPF3A-206ENST00000480362 CTAG1AP78358 180 aa11.44□□□□□ -0.58
UPF3A-206ENST00000480362 TNP2Q05952 138 aa11.44□□□□□ -0.58
UPF3A-206ENST00000480362 SPANXB1Q9NS25 103 aaPredicted RBP11.44□□□□□ -0.58
UPF3A-206ENST00000480362 CNBPP62633 177 aaKnown RBP11.43□□□□□ -0.58
UPF3A-206ENST00000480362 SRSF9Q13242 221 aaKnown RBP eCLIP11.43□□□□□ -0.58
UPF3A-206ENST00000480362 COX17Q14061 63 aa11.43□□□□□ -0.58
UPF3A-206ENST00000480362 RNF151Q2KHN1 245 aa11.43□□□□□ -0.58
UPF3A-206ENST00000480362 DAND5Q8N907 189 aa11.43□□□□□ -0.58
UPF3A-206ENST00000480362 HIST1H4GQ99525 98 aa11.43□□□□□ -0.58
UPF3A-206ENST00000480362 DNAH10Q8IVF4 4471 aa11.43□□□□□ -0.58
UPF3A-206ENST00000480362 HYDINQ4G0P3 5121 aa11.42□□□□□ -0.58
UPF3A-206ENST00000480362 TRAV16A0A0A6YYK6 109 aaPredicted RBP11.41□□□□□ -0.58
UPF3A-206ENST00000480362 MIR7-3HGQ8N6C7 128 aa11.41□□□□□ -0.58
UPF3A-206ENST00000480362 SPANXDQ9BXN6 97 aa11.41□□□□□ -0.58
UPF3A-206ENST00000480362 SPANXCQ9NY87 97 aa11.41□□□□□ -0.58
UPF3A-206ENST00000480362 EREGO14944 169 aa11.4□□□□□ -0.58
UPF3A-206ENST00000480362 NPC2P61916 151 aa11.39□□□□□ -0.59
UPF3A-206ENST00000480362 HSD52Q0P140 79 aa11.39□□□□□ -0.59
UPF3A-206ENST00000480362 TAL2Q16559 108 aa11.39□□□□□ -0.59
UPF3A-206ENST00000480362 Q6ZVH6 145 aa11.39□□□□□ -0.59
UPF3A-206ENST00000480362 MUSTN1Q8IVN3 82 aa11.38□□□□□ -0.59
UPF3A-206ENST00000480362 NDUFC2-KCTD14E9PQ53 114 aa11.37□□□□□ -0.59
UPF3A-206ENST00000480362 LINC00308Q8TCZ7 52 aa11.37□□□□□ -0.59
UPF3A-206ENST00000480362 SACSQ9NZJ4 4579 aa11.37□□□□□ -0.59
UPF3A-206ENST00000480362 IFITM1P13164 125 aa11.36□□□□□ -0.59
UPF3A-206ENST00000480362 GCSHP23434 173 aa11.36□□□□□ -0.59
UPF3A-206ENST00000480362 CEND1Q8N111 149 aa11.36□□□□□ -0.59
UPF3A-206ENST00000480362 C9orf163Q8N9P6 203 aa11.36□□□□□ -0.59
UPF3A-206ENST00000480362 DNAH2Q9P225 4427 aa11.35□□□□□ -0.59
UPF3A-206ENST00000480362 KMT2CQ8NEZ4 4911 aaKnown RBP11.35□□□□□ -0.59
UPF3A-206ENST00000480362 EIF4EBP3O60516 100 aaPredicted RBP11.35□□□□□ -0.59
UPF3A-206ENST00000480362 TLX1NBP0CAT3 122 aa11.35□□□□□ -0.59
UPF3A-206ENST00000480362 FUSP35637 526 aaKnown RBP eCLIP11.35□□□□□ -0.59
UPF3A-206ENST00000480362 SOSTDC1Q6X4U4 206 aa11.35□□□□□ -0.59
UPF3A-206ENST00000480362 Q6ZRP5 223 aa11.35□□□□□ -0.59
UPF3A-206ENST00000480362 SND1-IT1Q9HBX3 110 aa11.35□□□□□ -0.59
UPF3A-206ENST00000480362 LOC107984640A0A0U1RRK4 108 aa11.34□□□□□ -0.59
UPF3A-206ENST00000480362 HINT1P49773 126 aaPredicted RBP11.34□□□□□ -0.59
UPF3A-206ENST00000480362 PTTG1IPP53801 180 aa11.34□□□□□ -0.59
UPF3A-206ENST00000480362 RPL18AQ02543 176 aaKnown RBP11.34□□□□□ -0.59
UPF3A-206ENST00000480362 GAGE2EQ4V326 116 aa11.34□□□□□ -0.59
UPF3A-206ENST00000480362 GAGE2DQ9UEU5 116 aa11.34□□□□□ -0.59
UPF3A-206ENST00000480362 LINC00336Q6ZUF6 198 aa11.33□□□□□ -0.6
UPF3A-206ENST00000480362 LINC01620Q4KN68 170 aa11.32□□□□□ -0.6
UPF3A-206ENST00000480362 BVES-AS1Q5T3Y7 98 aa11.32□□□□□ -0.6
UPF3A-206ENST00000480362 COPS9Q8WXC6 57 aa11.32□□□□□ -0.6
UPF3A-206ENST00000480362 XAGE1AQ9HD64 81 aa11.32□□□□□ -0.6
UPF3A-206ENST00000480362 IGLV5-52A0A0A0MRZ9 124 aa11.31□□□□□ -0.6
UPF3A-206ENST00000480362 LOC107984156A0A0G2JMH3 177 aa11.31□□□□□ -0.6
UPF3A-206ENST00000480362 M0R143 59 aa11.31□□□□□ -0.6
UPF3A-206ENST00000480362 FXYD2P54710 66 aa11.31□□□□□ -0.6
UPF3A-206ENST00000480362 RPL24P83731 157 aaKnown RBP11.31□□□□□ -0.6
UPF3A-206ENST00000480362 GAGE2BQ13066 116 aa11.31□□□□□ -0.6
UPF3A-206ENST00000480362 ARL17AQ8IVW1 177 aa11.31□□□□□ -0.6
UPF3A-206ENST00000480362 DNAH17Q9UFH2 4485 aa11.31□□□□□ -0.6
UPF3A-206ENST00000480362 PPDPFQ9H3Y8 114 aa11.3□□□□□ -0.6
UPF3A-206ENST00000480362 FRAS1Q86XX4 4008 aa11.3□□□□□ -0.6
UPF3A-206ENST00000480362 A4D1N5 150 aa11.29□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 76.5 ms