RNA–Protein interactions for RNA: ENST00000480022.1

CHD6-208, Transcript of chromodomain helicase DNA binding protein 6, humanhuman

TSL 2

Gene CHD6, Length 2,829 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD6-208ENST00000480022 PIK3CD-AS1Q5SR53 167 aa7.78□□□□□ -1.16
CHD6-208ENST00000480022 MTORP42345 2549 aa7.78□□□□□ -1.16
CHD6-208ENST00000480022 COX6A2Q02221 97 aa7.78□□□□□ -1.16
CHD6-208ENST00000480022 PMAIP1Q13794 54 aa7.78□□□□□ -1.16
CHD6-208ENST00000480022 IGHV3-73A0A0B4J1V6 119 aa7.77□□□□□ -1.17
CHD6-208ENST00000480022 H0YGX0 51 aa7.77□□□□□ -1.17
CHD6-208ENST00000480022 LINC00467Q9BRT7 94 aa7.77□□□□□ -1.17
CHD6-208ENST00000480022 RHPN1-AS1Q9BWJ2 59 aa7.77□□□□□ -1.17
CHD6-208ENST00000480022 CCKP06307 115 aa7.77□□□□□ -1.17
CHD6-208ENST00000480022 FP248Q71RG6 208 aaPredicted RBP7.77□□□□□ -1.17
CHD6-208ENST00000480022 WFDC9Q8NEX5 89 aa7.77□□□□□ -1.17
CHD6-208ENST00000480022 MOB4Q9Y3A3 225 aa7.77□□□□□ -1.17
CHD6-208ENST00000480022 VPREB1P12018 145 aa7.76□□□□□ -1.17
CHD6-208ENST00000480022 PROK1P58294 105 aa7.76□□□□□ -1.17
CHD6-208ENST00000480022 C5orf56Q8N8D9 126 aa7.76□□□□□ -1.17
CHD6-208ENST00000480022 TEP1Q99973 2627 aaKnown RBP7.76□□□□□ -1.17
CHD6-208ENST00000480022 RNASE1P07998 156 aaKnown RBP7.76□□□□□ -1.17
CHD6-208ENST00000480022 LINC00337Q8N6G1 96 aa7.76□□□□□ -1.17
CHD6-208ENST00000480022 SMIM1B2RUZ4 78 aa7.75□□□□□ -1.17
CHD6-208ENST00000480022 CD164L2Q6UWJ8 174 aa7.75□□□□□ -1.17
CHD6-208ENST00000480022 SMIM11BQ8TCY0 68 aa7.75□□□□□ -1.17
CHD6-208ENST00000480022 LECT2O14960 151 aa7.75□□□□□ -1.17
CHD6-208ENST00000480022 BLCAPP62952 87 aa7.75□□□□□ -1.17
CHD6-208ENST00000480022 ENHOQ6UWT2 76 aa7.75□□□□□ -1.17
CHD6-208ENST00000480022 NIPBLQ6KC79 2804 aaeCLIP7.75□□□□□ -1.17
CHD6-208ENST00000480022 IGKV3-20P01619 116 aa7.74□□□□□ -1.17
CHD6-208ENST00000480022 LINC00242Q5T6M2 205 aa7.74□□□□□ -1.17
CHD6-208ENST00000480022 TRAV7A0A075B6U4 112 aa7.74□□□□□ -1.17
CHD6-208ENST00000480022 TRBV10-3A0A0K0K1G6 114 aa7.74□□□□□ -1.17
CHD6-208ENST00000480022 H3BS24 57 aa7.74□□□□□ -1.17
CHD6-208ENST00000480022 LYPD5Q6UWN5 251 aa7.74□□□□□ -1.17
CHD6-208ENST00000480022 C1orf158Q8N1D5 194 aa7.74□□□□□ -1.17
CHD6-208ENST00000480022 MIR7-3HGQ8N6C7 128 aa7.74□□□□□ -1.17
CHD6-208ENST00000480022 IGKV2-28A0A075B6P5 120 aa7.73□□□□□ -1.17
CHD6-208ENST00000480022 IGHV3OR16-12A0A075B7B8 117 aa7.73□□□□□ -1.17
CHD6-208ENST00000480022 IGKV2D-28P01615 120 aa7.73□□□□□ -1.17
CHD6-208ENST00000480022 BCE1O60756 84 aa7.73□□□□□ -1.17
CHD6-208ENST00000480022 KLKP1Q107X0 134 aa7.73□□□□□ -1.17
CHD6-208ENST00000480022 BRK1Q8WUW1 75 aa7.73□□□□□ -1.17
CHD6-208ENST00000480022 SND1-IT1Q9HBX3 110 aa7.73□□□□□ -1.17
CHD6-208ENST00000480022 Q9UF83 564 aa7.73□□□□□ -1.17
CHD6-208ENST00000480022 SPINK13Q1W4C9 94 aa7.72□□□□□ -1.17
CHD6-208ENST00000480022 ZNF702PQ9H963 129 aa7.72□□□□□ -1.17
CHD6-208ENST00000480022 ORMDL1Q9P0S3 153 aa7.72□□□□□ -1.17
CHD6-208ENST00000480022 NF1P21359 2839 aa7.72□□□□□ -1.17
CHD6-208ENST00000480022 C19orf54Q5BKX5 351 aa7.72□□□□□ -1.17
CHD6-208ENST00000480022 IGHV3-38A0A0C4DH36 116 aa7.71□□□□□ -1.17
CHD6-208ENST00000480022 A0A0U1RQV1 116 aa7.71□□□□□ -1.17
CHD6-208ENST00000480022 IGHV3-11P01762 117 aa7.71□□□□□ -1.17
CHD6-208ENST00000480022 SLPIP03973 132 aa7.71□□□□□ -1.17
CHD6-208ENST00000480022 RPL36AP83881 106 aaKnown RBP7.71□□□□□ -1.18
CHD6-208ENST00000480022 SS18Q15532 418 aa7.71□□□□□ -1.18
CHD6-208ENST00000480022 RPL36ALQ969Q0 106 aaKnown RBP7.71□□□□□ -1.18
CHD6-208ENST00000480022 JMJD7-PLA2G4BH0Y9G9 81 aa7.7□□□□□ -1.18
CHD6-208ENST00000480022 FAM19A3Q7Z5A8 133 aa7.7□□□□□ -1.18
CHD6-208ENST00000480022 UBL5Q9BZL1 73 aa7.7□□□□□ -1.18
CHD6-208ENST00000480022 Q6ZSN1 163 aa7.7□□□□□ -1.18
CHD6-208ENST00000480022 LINC00482Q8N8I6 264 aa7.7□□□□□ -1.18
CHD6-208ENST00000480022 F8WEM9 126 aa7.69□□□□□ -1.18
CHD6-208ENST00000480022 RBM3P98179 157 aaKnown RBP7.69□□□□□ -1.18
CHD6-208ENST00000480022 USMG5Q96IX5 58 aa7.69□□□□□ -1.18
CHD6-208ENST00000480022 LINC00474Q9P2X8 69 aa7.69□□□□□ -1.18
CHD6-208ENST00000480022 TRBV7-6A0A0J9YX20 115 aa7.69□□□□□ -1.18
CHD6-208ENST00000480022 SNURFQ9Y675 71 aa7.69□□□□□ -1.18
CHD6-208ENST00000480022 RMI2Q96E14 147 aa7.68□□□□□ -1.18
CHD6-208ENST00000480022 LINC01006Q8NI28 216 aa7.68□□□□□ -1.18
CHD6-208ENST00000480022 HTN1P15515 57 aa7.67□□□□□ -1.18
CHD6-208ENST00000480022 SNRPD3P62318 126 aaKnown RBP7.67□□□□□ -1.18
CHD6-208ENST00000480022 MRPL55Q7Z7F7 128 aaKnown RBP7.67□□□□□ -1.18
CHD6-208ENST00000480022 KRTAP24-1Q3LI83 254 aa7.67□□□□□ -1.18
CHD6-208ENST00000480022 C11orf45Q8TAV5 145 aa7.67□□□□□ -1.18
CHD6-208ENST00000480022 SERTAD4-AS1Q5TG53 156 aa7.66□□□□□ -1.18
CHD6-208ENST00000480022 K7EMT4 169 aa7.66□□□□□ -1.18
CHD6-208ENST00000480022 ATP5EP56381 51 aaPredicted RBP7.66□□□□□ -1.18
CHD6-208ENST00000480022 C11orf72Q8NBR9 251 aa7.66□□□□□ -1.18
CHD6-208ENST00000480022 NDUFC1O43677 76 aa7.65□□□□□ -1.18
CHD6-208ENST00000480022 SETD2Q9BYW2 2564 aaPredicted RBP7.65□□□□□ -1.18
CHD6-208ENST00000480022 JMJD1CQ15652 2540 aa7.65□□□□□ -1.18
CHD6-208ENST00000480022 IGHV3-53P01767 116 aa7.65□□□□□ -1.18
CHD6-208ENST00000480022 CCL18P55774 89 aa7.65□□□□□ -1.18
CHD6-208ENST00000480022 LINC00158P58513 81 aa7.65□□□□□ -1.18
CHD6-208ENST00000480022 CFHR3Q02985 330 aa7.65□□□□□ -1.18
CHD6-208ENST00000480022 FBN1P35555 2871 aaKnown RBP7.65□□□□□ -1.19
CHD6-208ENST00000480022 H3BUA1 57 aa7.65□□□□□ -1.19
CHD6-208ENST00000480022 C10orf99Q6UWK7 81 aa7.65□□□□□ -1.19
CHD6-208ENST00000480022 LINC00167Q96N53 147 aa7.64□□□□□ -1.19
CHD6-208ENST00000480022 TMEM256-PLSCR3K7ERE1 68 aa7.63□□□□□ -1.19
CHD6-208ENST00000480022 COX7B2Q8TF08 81 aa7.63□□□□□ -1.19
CHD6-208ENST00000480022 TRAV10A0A0B4J240 114 aa7.63□□□□□ -1.19
CHD6-208ENST00000480022 PAX4O43316 350 aa7.63□□□□□ -1.19
CHD6-208ENST00000480022 K7EQG2 157 aa7.62□□□□□ -1.19
CHD6-208ENST00000480022 IGLV1-40P01703 118 aa7.62□□□□□ -1.19
CHD6-208ENST00000480022 UBE2E2Q96LR5 201 aa7.62□□□□□ -1.19
CHD6-208ENST00000480022 C2CD3Q4AC94 2353 aa7.62□□□□□ -1.19
CHD6-208ENST00000480022 TOMM7Q9P0U1 55 aa7.61□□□□□ -1.19
CHD6-208ENST00000480022 KRTAP10-3P60369 221 aa7.61□□□□□ -1.19
CHD6-208ENST00000480022 CDC42SE2Q9NRR3 84 aa7.61□□□□□ -1.19
CHD6-208ENST00000480022 Q6ZTI0 123 aa7.6□□□□□ -1.19
CHD6-208ENST00000480022 TRBV6-4A0A1B0GX49 114 aa7.6□□□□□ -1.19
CHD6-208ENST00000480022 PRM2P04554 102 aa7.6□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 43.7 ms