RNA–Protein interactions for RNA: ENST00000479602.5

DDX56-211, Transcript of DEAD-box helicase 56, humanhuman

TSL 2

Gene DDX56, Length 440 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX56-211ENST00000479602 PRSS1P07477 247 aa5.77□□□□□ -1.49
DDX56-211ENST00000479602 CIRBPQ14011 172 aaKnown RBP5.77□□□□□ -1.49
DDX56-211ENST00000479602 KIAA0087Q14695 138 aa5.77□□□□□ -1.49
DDX56-211ENST00000479602 LINC01545Q5VT33 79 aa5.77□□□□□ -1.49
DDX56-211ENST00000479602 CHAC1Q9BUX1 264 aa5.77□□□□□ -1.49
DDX56-211ENST00000479602 GEMIN7Q9H840 131 aaKnown RBP5.77□□□□□ -1.49
DDX56-211ENST00000479602 CDKN2A-AS1Q9UH64 79 aa5.77□□□□□ -1.49
DDX56-211ENST00000479602 PKHD1L1Q86WI1 4243 aa5.76□□□□□ -1.49
DDX56-211ENST00000479602 A0A0J9YXV3 536 aa5.76□□□□□ -1.49
DDX56-211ENST00000479602 SYS1-DBNDD2H3BUS1 97 aa5.76□□□□□ -1.49
DDX56-211ENST00000479602 TLX1NBP0CAT3 122 aa5.76□□□□□ -1.49
DDX56-211ENST00000479602 ZNF22P17026 224 aaPredicted RBP5.76□□□□□ -1.49
DDX56-211ENST00000479602 MALP21145 153 aa5.76□□□□□ -1.49
DDX56-211ENST00000479602 HIST1H2BLQ99880 126 aa5.76□□□□□ -1.49
DDX56-211ENST00000479602 MRPL35Q9NZE8 188 aaKnown RBP5.76□□□□□ -1.49
DDX56-211ENST00000479602 CHTOPQ9Y3Y2 248 aaKnown RBP5.76□□□□□ -1.49
DDX56-211ENST00000479602 IGKV3OR2-268A0A0C4DH90 116 aa5.75□□□□□ -1.49
DDX56-211ENST00000479602 TRBV30A0A0K0K1B3 111 aa5.75□□□□□ -1.49
DDX56-211ENST00000479602 KRTAP10-4P60372 401 aaPredicted RBP5.75□□□□□ -1.49
DDX56-211ENST00000479602 KRTDAPP60985 99 aa5.75□□□□□ -1.49
DDX56-211ENST00000479602 COX6A2Q02221 97 aa5.75□□□□□ -1.49
DDX56-211ENST00000479602 IGLV5-52A0A0A0MRZ9 124 aa5.74□□□□□ -1.49
DDX56-211ENST00000479602 KRTAP29-1A8MX34 341 aaPredicted RBP5.74□□□□□ -1.49
DDX56-211ENST00000479602 FAM229AH3BQW9 127 aa5.74□□□□□ -1.49
DDX56-211ENST00000479602 ZNF561-AS1K7EIQ3 104 aa5.74□□□□□ -1.49
DDX56-211ENST00000479602 SPAG11BQ08648 103 aa5.74□□□□□ -1.49
DDX56-211ENST00000479602 C5orf38Q86SI9 138 aa5.74□□□□□ -1.49
DDX56-211ENST00000479602 LINC00469Q8N7U9 141 aa5.74□□□□□ -1.49
DDX56-211ENST00000479602 hDV102S1A0JD36 115 aa5.73□□□□□ -1.49
DDX56-211ENST00000479602 TMEM223A0PJW6 202 aa5.73□□□□□ -1.49
DDX56-211ENST00000479602 LINC00587B1AMM8 73 aa5.73□□□□□ -1.49
DDX56-211ENST00000479602 NDUFA1O15239 70 aa5.73□□□□□ -1.49
DDX56-211ENST00000479602 DPM2O94777 84 aa5.73□□□□□ -1.49
DDX56-211ENST00000479602 SLPIP03973 132 aa5.73□□□□□ -1.49
DDX56-211ENST00000479602 HAMPP81172 84 aa5.73□□□□□ -1.49
DDX56-211ENST00000479602 ZC2HC1BQ5TFG8 222 aa5.73□□□□□ -1.49
DDX56-211ENST00000479602 ORAOV1Q8WV07 137 aa5.73□□□□□ -1.49
DDX56-211ENST00000479602 H0Y8G0 127 aa5.72□□□□□ -1.49
DDX56-211ENST00000479602 SCGB1D1O95968 90 aa5.72□□□□□ -1.49
DDX56-211ENST00000479602 C3orf79P0CE67 100 aa5.72□□□□□ -1.49
DDX56-211ENST00000479602 SYCNQ0VAF6 134 aa5.72□□□□□ -1.49
DDX56-211ENST00000479602 CARD19Q96LW7 228 aa5.72□□□□□ -1.49
DDX56-211ENST00000479602 LINC00474Q9P2X8 69 aa5.72□□□□□ -1.49
DDX56-211ENST00000479602 HSBP1L1C9JCN9 74 aa5.71□□□□□ -1.5
DDX56-211ENST00000479602 LECT2O14960 151 aa5.71□□□□□ -1.5
DDX56-211ENST00000479602 IGKCP01834 107 aa5.71□□□□□ -1.5
DDX56-211ENST00000479602 NMUP48645 174 aa5.71□□□□□ -1.5
DDX56-211ENST00000479602 SDIM1Q6ZPB5 146 aa5.71□□□□□ -1.5
DDX56-211ENST00000479602 PRSS2P07478 247 aa5.7□□□□□ -1.5
DDX56-211ENST00000479602 HERVK_113P61574 105 aa5.7□□□□□ -1.5
DDX56-211ENST00000479602 COX17Q14061 63 aa5.7□□□□□ -1.5
DDX56-211ENST00000479602 COX7B2Q8TF08 81 aa5.7□□□□□ -1.5
DDX56-211ENST00000479602 ZNF625Q96I27 306 aaPredicted RBP5.7□□□□□ -1.5
DDX56-211ENST00000479602 CAMK2N2Q96S95 79 aa5.7□□□□□ -1.5
DDX56-211ENST00000479602 E9PLD3 99 aa5.69□□□□□ -1.5
DDX56-211ENST00000479602 HERV-K104P63124 156 aa5.69□□□□□ -1.5
DDX56-211ENST00000479602 JOSD1Q15040 202 aaPredicted RBP5.69□□□□□ -1.5
DDX56-211ENST00000479602 HIGD2BQ4VC39 106 aa5.69□□□□□ -1.5
DDX56-211ENST00000479602 PYY3Q5JQD4 70 aa5.69□□□□□ -1.5
DDX56-211ENST00000479602 TMEM170BQ5T4T1 132 aa5.69□□□□□ -1.5
DDX56-211ENST00000479602 Q6ZRU5 148 aa5.69□□□□□ -1.5
DDX56-211ENST00000479602 PLEKHB2Q96CS7 222 aa5.69□□□□□ -1.5
DDX56-211ENST00000479602 IGLV2-33A0A075B6J2 118 aaPredicted RBP5.68□□□□□ -1.5
DDX56-211ENST00000479602 LOC107984640A0A0U1RRK4 108 aa5.68□□□□□ -1.5
DDX56-211ENST00000479602 NDUFC2-KCTD14E9PQ53 114 aa5.68□□□□□ -1.5
DDX56-211ENST00000479602 LBHQ53QV2 105 aaPredicted RBP5.68□□□□□ -1.5
DDX56-211ENST00000479602 C6orf226Q5I0X4 101 aa5.68□□□□□ -1.5
DDX56-211ENST00000479602 SPACA4Q8TDM5 124 aa5.68□□□□□ -1.5
DDX56-211ENST00000479602 PPDPFQ9H3Y8 114 aa5.68□□□□□ -1.5
DDX56-211ENST00000479602 C6orf48Q9UBA6 75 aa5.68□□□□□ -1.5
DDX56-211ENST00000479602 TNXBP22105 4242 aa5.68□□□□□ -1.5
DDX56-211ENST00000479602 LEPROTO15243 131 aa5.67□□□□□ -1.5
DDX56-211ENST00000479602 PLA2G1BP04054 148 aaKnown RBP5.67□□□□□ -1.5
DDX56-211ENST00000479602 SPINK8P0C7L1 97 aa5.67□□□□□ -1.5
DDX56-211ENST00000479602 CKS1BP61024 79 aa5.67□□□□□ -1.5
DDX56-211ENST00000479602 LINC00528Q8N1L1 170 aa5.67□□□□□ -1.5
DDX56-211ENST00000479602 LOC107984156A0A0G2JMH3 177 aa5.66□□□□□ -1.5
DDX56-211ENST00000479602 TSTD3H0UI37 97 aa5.66□□□□□ -1.5
DDX56-211ENST00000479602 PTTG1IPP53801 180 aa5.66□□□□□ -1.5
DDX56-211ENST00000479602 SCXQ7RTU7 201 aa5.66□□□□□ -1.5
DDX56-211ENST00000479602 ARL17AQ8IVW1 177 aa5.66□□□□□ -1.5
DDX56-211ENST00000479602 PLAC8Q9NZF1 115 aa5.66□□□□□ -1.5
DDX56-211ENST00000479602 PLA2G2DQ9UNK4 145 aa5.66□□□□□ -1.5
DDX56-211ENST00000479602 J3QL48 77 aa5.65□□□□□ -1.5
DDX56-211ENST00000479602 J3QQQ9 107 aa5.65□□□□□ -1.5
DDX56-211ENST00000479602 C10orf25Q5T742 122 aa5.65□□□□□ -1.5
DDX56-211ENST00000479602 UNQ6190/PRO20217Q6UXQ8 127 aa5.65□□□□□ -1.5
DDX56-211ENST00000479602 CIRBP-AS1Q8TBR5 109 aa5.65□□□□□ -1.5
DDX56-211ENST00000479602 VAMP8Q9BV40 100 aa5.65□□□□□ -1.5
DDX56-211ENST00000479602 LRP2P98164 4655 aa5.64□□□□□ -1.51
DDX56-211ENST00000479602 MYMXA0A1B0GTQ4 84 aa5.64□□□□□ -1.51
DDX56-211ENST00000479602 TIMM17BO60830 172 aa5.64□□□□□ -1.51
DDX56-211ENST00000479602 OXTP01178 125 aa5.64□□□□□ -1.51
DDX56-211ENST00000479602 LINC01620Q4KN68 170 aa5.64□□□□□ -1.51
DDX56-211ENST00000479602 C2orf82Q6UX34 121 aa5.64□□□□□ -1.51
DDX56-211ENST00000479602 NDUFA12Q9UI09 145 aa5.64□□□□□ -1.51
DDX56-211ENST00000479602 IGLV5-37A0A075B6J1 123 aa5.63□□□□□ -1.51
DDX56-211ENST00000479602 A0A096LNI7 61 aa5.63□□□□□ -1.51
DDX56-211ENST00000479602 DDTP30046 118 aa5.63□□□□□ -1.51
DDX56-211ENST00000479602 SERTAD4-AS1Q5TG53 156 aa5.63□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 81.6 ms