RNA–Protein interactions for RNA: ENST00000479341.1

RUNX3-204, Transcript of runt related transcription factor 3, humanhuman

TSL 1 (best)

Gene RUNX3, Length 284 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RUNX3-204ENST00000479341 SCGB1D1O95968 90 aa12.05□□□□□ -0.48
RUNX3-204ENST00000479341 C10orf25Q5T742 122 aa12.05□□□□□ -0.48
RUNX3-204ENST00000479341 C2orf82Q6UX34 121 aa12.05□□□□□ -0.48
RUNX3-204ENST00000479341 C9orf163Q8N9P6 203 aa12.05□□□□□ -0.48
RUNX3-204ENST00000479341 CARD19Q96LW7 228 aa12.05□□□□□ -0.48
RUNX3-204ENST00000479341 TRAV16A0A0A6YYK6 109 aaPredicted RBP12.04□□□□□ -0.48
RUNX3-204ENST00000479341 E9PLD3 99 aa12.04□□□□□ -0.48
RUNX3-204ENST00000479341 LEPROTO15243 131 aa12.04□□□□□ -0.48
RUNX3-204ENST00000479341 CXCL5P42830 114 aa12.04□□□□□ -0.48
RUNX3-204ENST00000479341 CKS1BP61024 79 aa12.04□□□□□ -0.48
RUNX3-204ENST00000479341 JOSD1Q15040 202 aaPredicted RBP12.04□□□□□ -0.48
RUNX3-204ENST00000479341 PLEKHB2Q96CS7 222 aa12.03□□□□□ -0.48
RUNX3-204ENST00000479341 PKD1P98161 4303 aa12.02□□□□□ -0.48
RUNX3-204ENST00000479341 RNF151Q2KHN1 245 aa12.02□□□□□ -0.49
RUNX3-204ENST00000479341 C6orf48Q9UBA6 75 aa12.02□□□□□ -0.49
RUNX3-204ENST00000479341 KIAA1109Q2LD37 5005 aa12.02□□□□□ -0.49
RUNX3-204ENST00000479341 RYR1P21817 5038 aa12.01□□□□□ -0.49
RUNX3-204ENST00000479341 TSPEAR-AS2P59090 65 aa12.01□□□□□ -0.49
RUNX3-204ENST00000479341 TRBV30A0A0K0K1B3 111 aa12□□□□□ -0.49
RUNX3-204ENST00000479341 LINC01620Q4KN68 170 aa12□□□□□ -0.49
RUNX3-204ENST00000479341 ANKRD39Q53RE8 183 aa12□□□□□ -0.49
RUNX3-204ENST00000479341 ZNF625Q96I27 306 aaPredicted RBP12□□□□□ -0.49
RUNX3-204ENST00000479341 J3QQQ9 107 aa11.99□□□□□ -0.49
RUNX3-204ENST00000479341 GCSHP23434 173 aa11.99□□□□□ -0.49
RUNX3-204ENST00000479341 IGKV2D-26A0A0A0MRZ7 120 aa11.98□□□□□ -0.49
RUNX3-204ENST00000479341 MAJINQ3KP22 176 aa11.98□□□□□ -0.49
RUNX3-204ENST00000479341 PYY3Q5JQD4 70 aa11.98□□□□□ -0.49
RUNX3-204ENST00000479341 SFTA2Q6UW10 78 aa11.98□□□□□ -0.49
RUNX3-204ENST00000479341 SDIM1Q6ZPB5 146 aa11.98□□□□□ -0.49
RUNX3-204ENST00000479341 PCLOQ9Y6V0 5065 aa11.98□□□□□ -0.49
RUNX3-204ENST00000479341 PKHD1P08F94 4074 aa11.97□□□□□ -0.49
RUNX3-204ENST00000479341 C16orf90A8MZG2 172 aa11.97□□□□□ -0.49
RUNX3-204ENST00000479341 KRTAP10-1P60331 282 aa11.97□□□□□ -0.49
RUNX3-204ENST00000479341 NDUFA12Q9UI09 145 aa11.97□□□□□ -0.49
RUNX3-204ENST00000479341 LGALS3P17931 250 aaKnown RBP11.96□□□□□ -0.49
RUNX3-204ENST00000479341 C9orf116Q5BN46 136 aaPredicted RBP11.96□□□□□ -0.49
RUNX3-204ENST00000479341 MYMXA0A1B0GTQ4 84 aa11.94□□□□□ -0.5
RUNX3-204ENST00000479341 HSBP1L1C9JCN9 74 aa11.94□□□□□ -0.5
RUNX3-204ENST00000479341 TLX1NBP0CAT3 122 aa11.94□□□□□ -0.5
RUNX3-204ENST00000479341 NMUP48645 174 aa11.94□□□□□ -0.5
RUNX3-204ENST00000479341 DNAH5Q8TE73 4624 aa11.93□□□□□ -0.5
RUNX3-204ENST00000479341 LOC107984640A0A0U1RRK4 108 aa11.93□□□□□ -0.5
RUNX3-204ENST00000479341 LOC105371267A0A1B0GV96 52 aa11.93□□□□□ -0.5
RUNX3-204ENST00000479341 HERV-K104P63124 156 aa11.93□□□□□ -0.5
RUNX3-204ENST00000479341 DYNC1H1Q14204 4646 aaKnown RBP11.92□□□□□ -0.5
RUNX3-204ENST00000479341 PKIGQ9Y2B9 76 aa11.92□□□□□ -0.5
RUNX3-204ENST00000479341 TTTY13Q9BZ97 58 aa11.91□□□□□ -0.5
RUNX3-204ENST00000479341 ERG28Q9UKR5 140 aa11.91□□□□□ -0.5
RUNX3-204ENST00000479341 NDUFC2-KCTD14E9PQ53 114 aa11.9□□□□□ -0.5
RUNX3-204ENST00000479341 Q6ZRP5 223 aa11.9□□□□□ -0.5
RUNX3-204ENST00000479341 A0A096LNI7 61 aa11.89□□□□□ -0.51
RUNX3-204ENST00000479341 FAM30AQ9NZY2 134 aa11.89□□□□□ -0.51
RUNX3-204ENST00000479341 ZNF815PA8K554 130 aa11.88□□□□□ -0.51
RUNX3-204ENST00000479341 PTTG1IPP53801 180 aa11.88□□□□□ -0.51
RUNX3-204ENST00000479341 GAGE2BQ13066 116 aa11.88□□□□□ -0.51
RUNX3-204ENST00000479341 COX17Q14061 63 aa11.88□□□□□ -0.51
RUNX3-204ENST00000479341 Q6ZSA8 131 aa11.88□□□□□ -0.51
RUNX3-204ENST00000479341 PCP2Q8IVA1 136 aa11.88□□□□□ -0.51
RUNX3-204ENST00000479341 VAMP8Q9BV40 100 aa11.88□□□□□ -0.51
RUNX3-204ENST00000479341 PANO1I0J062 215 aa11.87□□□□□ -0.51
RUNX3-204ENST00000479341 CHTF8P0CG12 524 aa11.87□□□□□ -0.51
RUNX3-204ENST00000479341 PFN2P35080 140 aa11.87□□□□□ -0.51
RUNX3-204ENST00000479341 RPL18AQ02543 176 aaKnown RBP11.87□□□□□ -0.51
RUNX3-204ENST00000479341 CIRBPQ14011 172 aaKnown RBP11.87□□□□□ -0.51
RUNX3-204ENST00000479341 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP11.87□□□□□ -0.51
RUNX3-204ENST00000479341 A0A0J9YXY3 114 aa11.86□□□□□ -0.51
RUNX3-204ENST00000479341 LINC00587B1AMM8 73 aa11.86□□□□□ -0.51
RUNX3-204ENST00000479341 MEIG1Q5JSS6 88 aa11.86□□□□□ -0.51
RUNX3-204ENST00000479341 PAM16Q9Y3D7 125 aa11.86□□□□□ -0.51
RUNX3-204ENST00000479341 IGKV2-24A0A0C4DH68 120 aa11.85□□□□□ -0.51
RUNX3-204ENST00000479341 SMIM13P0DJ93 91 aa11.85□□□□□ -0.51
RUNX3-204ENST00000479341 GAGE2EQ4V326 116 aa11.85□□□□□ -0.51
RUNX3-204ENST00000479341 SPATA45Q537H7 98 aa11.85□□□□□ -0.51
RUNX3-204ENST00000479341 GAGE2DQ9UEU5 116 aa11.85□□□□□ -0.51
RUNX3-204ENST00000479341 LINC00158P58513 81 aa11.84□□□□□ -0.51
RUNX3-204ENST00000479341 SPACA4Q8TDM5 124 aa11.84□□□□□ -0.51
RUNX3-204ENST00000479341 LINC00474Q9P2X8 69 aa11.84□□□□□ -0.51
RUNX3-204ENST00000479341 LRP1BQ9NZR2 4599 aa11.83□□□□□ -0.52
RUNX3-204ENST00000479341 A0A0U1RRA0 63 aa11.83□□□□□ -0.52
RUNX3-204ENST00000479341 COX8AP10176 69 aa11.82□□□□□ -0.52
RUNX3-204ENST00000479341 C9orf129Q5T035 196 aaKnown RBP11.82□□□□□ -0.52
RUNX3-204ENST00000479341 DNAH8Q96JB1 4490 aa11.82□□□□□ -0.52
RUNX3-204ENST00000479341 TIMM17BO60830 172 aa11.81□□□□□ -0.52
RUNX3-204ENST00000479341 BOD1L2Q8IYS8 172 aa11.81□□□□□ -0.52
RUNX3-204ENST00000479341 SND1-IT1Q9HBX3 110 aa11.81□□□□□ -0.52
RUNX3-204ENST00000479341 XAGE1AQ9HD64 81 aa11.81□□□□□ -0.52
RUNX3-204ENST00000479341 SMIM6P0DI80 62 aa11.8□□□□□ -0.52
RUNX3-204ENST00000479341 MIR7-3HGQ8N6C7 128 aa11.8□□□□□ -0.52
RUNX3-204ENST00000479341 LITAFQ99732 161 aa11.8□□□□□ -0.52
RUNX3-204ENST00000479341 DLEU1O43261 78 aa11.79□□□□□ -0.52
RUNX3-204ENST00000479341 ADAMTSL4-AS1Q5T5F5 129 aa11.79□□□□□ -0.52
RUNX3-204ENST00000479341 ABCA13Q86UQ4 5058 aa11.78□□□□□ -0.52
RUNX3-204ENST00000479341 A0A087WYN8 130 aa11.78□□□□□ -0.52
RUNX3-204ENST00000479341 XGP55808 180 aa11.78□□□□□ -0.52
RUNX3-204ENST00000479341 SCGB1D4Q6XE38 83 aa11.78□□□□□ -0.52
RUNX3-204ENST00000479341 DPH3Q96FX2 82 aa11.78□□□□□ -0.52
RUNX3-204ENST00000479341 C14orf144Q96I85 54 aa11.78□□□□□ -0.52
RUNX3-204ENST00000479341 A0A1W2PNN7 141 aa11.77□□□□□ -0.53
RUNX3-204ENST00000479341 EPM2AB3EWF7 344 aa11.77□□□□□ -0.53
RUNX3-204ENST00000479341 S100A12P80511 92 aa11.77□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms