RNA–Protein interactions for RNA: ENST00000479197.1

RFK-204, Transcript of riboflavin kinase, human

TSL 1 (best)

Gene RFK, Length 1,501 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
RFK-204	ENST00000479197	TMEM170B	Q5T4T1	132 aa		11.51	□□□□□ -0.57
RFK-204	ENST00000479197	C10orf25	Q5T742	122 aa		11.51	□□□□□ -0.57
RFK-204	ENST00000479197	C2orf82	Q6UX34	121 aa		11.51	□□□□□ -0.57
RFK-204	ENST00000479197	UNQ6190/PRO20217	Q6UXQ8	127 aa		11.51	□□□□□ -0.57
RFK-204	ENST00000479197	PANO1	I0J062	215 aa		11.5	□□□□□ -0.57
RFK-204	ENST00000479197	CKS1B	P61024	79 aa		11.5	□□□□□ -0.57
RFK-204	ENST00000479197	ODF1	Q14990	250 aa		11.5	□□□□□ -0.57
RFK-204	ENST00000479197	SCX	Q7RTU7	201 aa		11.5	□□□□□ -0.57
RFK-204	ENST00000479197	MAP1LC3C	Q9BXW4	147 aa		11.5	□□□□□ -0.57
RFK-204	ENST00000479197	CHTF8	P0CG12	524 aa		11.5	□□□□□ -0.57
RFK-204	ENST00000479197	CIRBP	Q14011	172 aa	Known RBP	11.5	□□□□□ -0.57
RFK-204	ENST00000479197	COX7B2	Q8TF08	81 aa		11.5	□□□□□ -0.57
RFK-204	ENST00000479197	C6orf48	Q9UBA6	75 aa		11.5	□□□□□ -0.57
RFK-204	ENST00000479197	LOC107984640	A0A0U1RRK4	108 aa		11.49	□□□□□ -0.57
RFK-204	ENST00000479197	CIRBP-AS1	Q8TBR5	109 aa		11.49	□□□□□ -0.57
RFK-204	ENST00000479197	SPACA4	Q8TDM5	124 aa		11.49	□□□□□ -0.57
RFK-204	ENST00000479197		A0A096LNI7	61 aa		11.48	□□□□□ -0.57
RFK-204	ENST00000479197	IGKV2-24	A0A0C4DH68	120 aa		11.48	□□□□□ -0.57
RFK-204	ENST00000479197	TRBV30	A0A0K0K1B3	111 aa		11.48	□□□□□ -0.57
RFK-204	ENST00000479197	CXCL5	P42830	114 aa		11.48	□□□□□ -0.57
RFK-204	ENST00000479197	IGLV5-39	A0A0G2JS06	123 aa		11.47	□□□□□ -0.57
RFK-204	ENST00000479197	LINC00474	Q9P2X8	69 aa		11.46	□□□□□ -0.57
RFK-204	ENST00000479197	FAT1	Q14517	4588 aa		11.45	□□□□□ -0.58
RFK-204	ENST00000479197	PLN	P26678	52 aa		11.45	□□□□□ -0.58
RFK-204	ENST00000479197	PTTG1IP	P53801	180 aa		11.45	□□□□□ -0.58
RFK-204	ENST00000479197	RPL18A	Q02543	176 aa	Known RBP	11.45	□□□□□ -0.58
RFK-204	ENST00000479197	MAJIN	Q3KP22	176 aa		11.45	□□□□□ -0.58
RFK-204	ENST00000479197	DPH3	Q96FX2	82 aa		11.45	□□□□□ -0.58
RFK-204	ENST00000479197	TMEM223	A0PJW6	202 aa		11.45	□□□□□ -0.58
RFK-204	ENST00000479197	SYS1-DBNDD2	H3BUS1	97 aa		11.45	□□□□□ -0.58
RFK-204	ENST00000479197	TLX1NB	P0CAT3	122 aa		11.45	□□□□□ -0.58
RFK-204	ENST00000479197	GAGE2B	Q13066	116 aa		11.45	□□□□□ -0.58
RFK-204	ENST00000479197	SMR3B	P02814	79 aa	Predicted RBP	11.44	□□□□□ -0.58
RFK-204	ENST00000479197	PMCHL2	Q9BQD1	86 aa		11.44	□□□□□ -0.58
RFK-204	ENST00000479197		A0A087WYN8	130 aa		11.43	□□□□□ -0.58
RFK-204	ENST00000479197	DPM2	O94777	84 aa		11.43	□□□□□ -0.58
RFK-204	ENST00000479197		Q8N1X5	172 aa		11.43	□□□□□ -0.58
RFK-204	ENST00000479197	C9orf116	Q5BN46	136 aa	Predicted RBP	11.42	□□□□□ -0.58
RFK-204	ENST00000479197	KRTAP17-1	Q9BYP8	105 aa		11.42	□□□□□ -0.58
RFK-204	ENST00000479197	NDUFC2-KCTD14	E9PQ53	114 aa		11.41	□□□□□ -0.58
RFK-204	ENST00000479197	IGKC	P01834	107 aa		11.41	□□□□□ -0.58
RFK-204	ENST00000479197	S100A6	P06703	90 aa		11.41	□□□□□ -0.58
RFK-204	ENST00000479197		Q6ZRP5	223 aa		11.41	□□□□□ -0.58
RFK-204	ENST00000479197	PET117	Q6UWS5	81 aa		11.4	□□□□□ -0.58
RFK-204	ENST00000479197	STPG4	Q8N801	248 aa		11.4	□□□□□ -0.58
RFK-204	ENST00000479197	PLAC8	Q9NZF1	115 aa		11.4	□□□□□ -0.58
RFK-204	ENST00000479197	C3orf79	P0CE67	100 aa		11.4	□□□□□ -0.59
RFK-204	ENST00000479197	HIST3H2BB	Q8N257	126 aa		11.39	□□□□□ -0.59
RFK-204	ENST00000479197	KRTDAP	P60985	99 aa		11.38	□□□□□ -0.59
RFK-204	ENST00000479197	GAGE2E	Q4V326	116 aa		11.38	□□□□□ -0.59
RFK-204	ENST00000479197	LINC01545	Q5VT33	79 aa		11.38	□□□□□ -0.59
RFK-204	ENST00000479197	SFTA2	Q6UW10	78 aa		11.38	□□□□□ -0.59
RFK-204	ENST00000479197	LINC00528	Q8N1L1	170 aa		11.38	□□□□□ -0.59
RFK-204	ENST00000479197	GAGE2D	Q9UEU5	116 aa		11.38	□□□□□ -0.59
RFK-204	ENST00000479197	S100A2	P29034	98 aa		11.37	□□□□□ -0.59
RFK-204	ENST00000479197	FAM229A	H3BQW9	127 aa		11.36	□□□□□ -0.59
RFK-204	ENST00000479197		Q5VSD8	79 aa		11.36	□□□□□ -0.59
RFK-204	ENST00000479197	EPM2A	B3EWF7	344 aa		11.35	□□□□□ -0.59
RFK-204	ENST00000479197	HERVK_113	P61574	105 aa		11.35	□□□□□ -0.59
RFK-204	ENST00000479197	ZNF625	Q96I27	306 aa	Predicted RBP	11.35	□□□□□ -0.59
RFK-204	ENST00000479197	HIST1H2BL	Q99880	126 aa		11.35	□□□□□ -0.59
RFK-204	ENST00000479197		A0A1W2PNN7	141 aa		11.33	□□□□□ -0.6
RFK-204	ENST00000479197	LEPROT	O15243	131 aa		11.33	□□□□□ -0.6
RFK-204	ENST00000479197	SNRPE	P62304	92 aa	Known RBP	11.33	□□□□□ -0.6
RFK-204	ENST00000479197	PLEKHB2	Q96CS7	222 aa		11.33	□□□□□ -0.6
RFK-204	ENST00000479197	VPS13B	Q7Z7G8	4022 aa		11.32	□□□□□ -0.6
RFK-204	ENST00000479197	C20orf202	A1L168	122 aa		11.32	□□□□□ -0.6
RFK-204	ENST00000479197	C9orf129	Q5T035	196 aa	Known RBP	11.32	□□□□□ -0.6
RFK-204	ENST00000479197	KRTAP4-5	Q9BYR2	181 aa		11.32	□□□□□ -0.6
RFK-204	ENST00000479197	ERG28	Q9UKR5	140 aa		11.32	□□□□□ -0.6
RFK-204	ENST00000479197	FAM168B	A1KXE4	195 aa		11.3	□□□□□ -0.6
RFK-204	ENST00000479197	PFN2	P35080	140 aa		11.3	□□□□□ -0.6
RFK-204	ENST00000479197	TSPEAR-AS2	P59090	65 aa		11.3	□□□□□ -0.6
RFK-204	ENST00000479197	COX17	Q14061	63 aa		11.3	□□□□□ -0.6
RFK-204	ENST00000479197	XAGE1A	Q9HD64	81 aa		11.3	□□□□□ -0.6
RFK-204	ENST00000479197	NDUFA12	Q9UI09	145 aa		11.3	□□□□□ -0.6
RFK-204	ENST00000479197	C5orf52	A6NGY3	159 aa		11.3	□□□□□ -0.6
RFK-204	ENST00000479197		J3QQQ9	107 aa		11.3	□□□□□ -0.6
RFK-204	ENST00000479197	PLA2G1B	P04054	148 aa	Known RBP	11.3	□□□□□ -0.6
RFK-204	ENST00000479197	C7orf33	Q8WU49	177 aa		11.3	□□□□□ -0.6
RFK-204	ENST00000479197		E9PLD3	99 aa		11.29	□□□□□ -0.6
RFK-204	ENST00000479197	HERV-K104	P63124	156 aa		11.29	□□□□□ -0.6
RFK-204	ENST00000479197	ABCA13	Q86UQ4	5058 aa		11.28	□□□□□ -0.6
RFK-204	ENST00000479197	MYMX	A0A1B0GTQ4	84 aa		11.28	□□□□□ -0.6
RFK-204	ENST00000479197	LGALS3	P17931	250 aa	Known RBP	11.28	□□□□□ -0.6
RFK-204	ENST00000479197	FAM19A5	Q7Z5A7	132 aa	Predicted RBP	11.28	□□□□□ -0.6
RFK-204	ENST00000479197	NMU	P48645	174 aa		11.26	□□□□□ -0.61
RFK-204	ENST00000479197	AKR1D1	P51857	326 aa		11.26	□□□□□ -0.61
RFK-204	ENST00000479197	RPL37A	P61513	92 aa	Known RBP	11.26	□□□□□ -0.61
RFK-204	ENST00000479197	KRTAP7-1	Q8IUC3	87 aa		11.26	□□□□□ -0.61
RFK-204	ENST00000479197	MEIG1	Q5JSS6	88 aa		11.25	□□□□□ -0.61
RFK-204	ENST00000479197	SRRM2	Q9UQ35	2752 aa	Known RBP	11.25	□□□□□ -0.61
RFK-204	ENST00000479197	LINC00158	P58513	81 aa		11.25	□□□□□ -0.61
RFK-204	ENST00000479197	PHF5A	Q7RTV0	110 aa	Known RBP	11.25	□□□□□ -0.61
RFK-204	ENST00000479197	LINC00587	B1AMM8	73 aa		11.24	□□□□□ -0.61
RFK-204	ENST00000479197	SERTAD4-AS1	Q5TG53	156 aa		11.24	□□□□□ -0.61
RFK-204	ENST00000479197	ATOH7	Q8N100	152 aa		11.24	□□□□□ -0.61
RFK-204	ENST00000479197		M0QXV9	152 aa		11.23	□□□□□ -0.61
RFK-204	ENST00000479197	KRTAP10-4	P60372	401 aa	Predicted RBP	11.23	□□□□□ -0.61
RFK-204	ENST00000479197	SND1-IT1	Q9HBX3	110 aa		11.23	□□□□□ -0.61

Retrieved 100 of 20,778 RNA–protein pairs in 49.6 ms