RNA–Protein interactions for RNA: ENST00000478769.1

NUDCD3-207, Transcript of NudC domain containing 3, humanhuman

TSL 3

Gene NUDCD3, Length 315 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUDCD3-207ENST00000478769 PRSS2P07478 247 aa8.75□□□□□ -1.01
NUDCD3-207ENST00000478769 GCSHP23434 173 aa8.75□□□□□ -1.01
NUDCD3-207ENST00000478769 KRTAP10-1P60331 282 aa8.75□□□□□ -1.01
NUDCD3-207ENST00000478769 C10orf25Q5T742 122 aa8.75□□□□□ -1.01
NUDCD3-207ENST00000478769 C9orf163Q8N9P6 203 aa8.75□□□□□ -1.01
NUDCD3-207ENST00000478769 NDUFA1O15239 70 aa8.74□□□□□ -1.01
NUDCD3-207ENST00000478769 UNQ6190/PRO20217Q6UXQ8 127 aa8.74□□□□□ -1.01
NUDCD3-207ENST00000478769 C20orf202A1L168 122 aa8.73□□□□□ -1.01
NUDCD3-207ENST00000478769 F8WDY8 70 aa8.73□□□□□ -1.01
NUDCD3-207ENST00000478769 C6orf226Q5I0X4 101 aa8.73□□□□□ -1.01
NUDCD3-207ENST00000478769 CKS1BP61024 79 aa8.72□□□□□ -1.01
NUDCD3-207ENST00000478769 C6orf48Q9UBA6 75 aa8.72□□□□□ -1.01
NUDCD3-207ENST00000478769 CXCL5P42830 114 aa8.71□□□□□ -1.02
NUDCD3-207ENST00000478769 TSPEAR-AS2P59090 65 aa8.71□□□□□ -1.02
NUDCD3-207ENST00000478769 ATOH7Q8N100 152 aa8.71□□□□□ -1.02
NUDCD3-207ENST00000478769 RYR1P21817 5038 aa8.71□□□□□ -1.02
NUDCD3-207ENST00000478769 KIAA1109Q2LD37 5005 aa8.71□□□□□ -1.02
NUDCD3-207ENST00000478769 HSPG2P98160 4391 aa8.7□□□□□ -1.02
NUDCD3-207ENST00000478769 SDIM1Q6ZPB5 146 aa8.7□□□□□ -1.02
NUDCD3-207ENST00000478769 TRBV30A0A0K0K1B3 111 aa8.69□□□□□ -1.02
NUDCD3-207ENST00000478769 HERVK_113P61574 105 aa8.69□□□□□ -1.02
NUDCD3-207ENST00000478769 RNF151Q2KHN1 245 aa8.69□□□□□ -1.02
NUDCD3-207ENST00000478769 C9orf116Q5BN46 136 aaPredicted RBP8.69□□□□□ -1.02
NUDCD3-207ENST00000478769 STPG4Q8N801 248 aa8.69□□□□□ -1.02
NUDCD3-207ENST00000478769 ZNF625Q96I27 306 aaPredicted RBP8.69□□□□□ -1.02
NUDCD3-207ENST00000478769 PANO1I0J062 215 aa8.68□□□□□ -1.02
NUDCD3-207ENST00000478769 LEPROTO15243 131 aa8.68□□□□□ -1.02
NUDCD3-207ENST00000478769 FAM30AQ9NZY2 134 aa8.68□□□□□ -1.02
NUDCD3-207ENST00000478769 A0A096LNI7 61 aa8.67□□□□□ -1.02
NUDCD3-207ENST00000478769 E9PLD3 99 aa8.67□□□□□ -1.02
NUDCD3-207ENST00000478769 CHTF8P0CG12 524 aa8.67□□□□□ -1.02
NUDCD3-207ENST00000478769 Q6ZSA8 131 aa8.67□□□□□ -1.02
NUDCD3-207ENST00000478769 PLEKHB2Q96CS7 222 aa8.67□□□□□ -1.02
NUDCD3-207ENST00000478769 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP8.67□□□□□ -1.02
NUDCD3-207ENST00000478769 LOC107984640A0A0U1RRK4 108 aa8.66□□□□□ -1.02
NUDCD3-207ENST00000478769 J3QQQ9 107 aa8.66□□□□□ -1.02
NUDCD3-207ENST00000478769 RPL18AQ02543 176 aaKnown RBP8.66□□□□□ -1.02
NUDCD3-207ENST00000478769 IGKV2D-26A0A0A0MRZ7 120 aa8.65□□□□□ -1.02
NUDCD3-207ENST00000478769 SCGB1D1O95968 90 aa8.65□□□□□ -1.02
NUDCD3-207ENST00000478769 TLX1NBP0CAT3 122 aa8.65□□□□□ -1.02
NUDCD3-207ENST00000478769 AKR1D1P51857 326 aa8.65□□□□□ -1.02
NUDCD3-207ENST00000478769 HAMPP81172 84 aa8.65□□□□□ -1.02
NUDCD3-207ENST00000478769 MAJINQ3KP22 176 aa8.65□□□□□ -1.02
NUDCD3-207ENST00000478769 ANKRD39Q53RE8 183 aa8.65□□□□□ -1.02
NUDCD3-207ENST00000478769 NDUFA12Q9UI09 145 aa8.65□□□□□ -1.02
NUDCD3-207ENST00000478769 IGKV2-24A0A0C4DH68 120 aa8.64□□□□□ -1.03
NUDCD3-207ENST00000478769 PTTG1IPP53801 180 aa8.64□□□□□ -1.03
NUDCD3-207ENST00000478769 CIRBPQ14011 172 aaKnown RBP8.64□□□□□ -1.03
NUDCD3-207ENST00000478769 Q6ZRP5 223 aa8.64□□□□□ -1.03
NUDCD3-207ENST00000478769 SPACA4Q8TDM5 124 aa8.64□□□□□ -1.03
NUDCD3-207ENST00000478769 PKIGQ9Y2B9 76 aa8.64□□□□□ -1.03
NUDCD3-207ENST00000478769 FAT1Q14517 4588 aa8.63□□□□□ -1.03
NUDCD3-207ENST00000478769 NDUFC2-KCTD14E9PQ53 114 aa8.63□□□□□ -1.03
NUDCD3-207ENST00000478769 LGALS3P17931 250 aaKnown RBP8.63□□□□□ -1.03
NUDCD3-207ENST00000478769 GAGE2BQ13066 116 aa8.63□□□□□ -1.03
NUDCD3-207ENST00000478769 SFTA2Q6UW10 78 aa8.63□□□□□ -1.03
NUDCD3-207ENST00000478769 NMUP48645 174 aa8.62□□□□□ -1.03
NUDCD3-207ENST00000478769 TTTY13Q9BZ97 58 aa8.62□□□□□ -1.03
NUDCD3-207ENST00000478769 ERG28Q9UKR5 140 aa8.62□□□□□ -1.03
NUDCD3-207ENST00000478769 MYMXA0A1B0GTQ4 84 aa8.61□□□□□ -1.03
NUDCD3-207ENST00000478769 XGP55808 180 aa8.61□□□□□ -1.03
NUDCD3-207ENST00000478769 JOSD1Q15040 202 aaPredicted RBP8.61□□□□□ -1.03
NUDCD3-207ENST00000478769 GAGE2EQ4V326 116 aa8.61□□□□□ -1.03
NUDCD3-207ENST00000478769 SCXQ7RTU7 201 aa8.61□□□□□ -1.03
NUDCD3-207ENST00000478769 GAGE2DQ9UEU5 116 aa8.61□□□□□ -1.03
NUDCD3-207ENST00000478769 HERC2O95714 4834 aa8.61□□□□□ -1.03
NUDCD3-207ENST00000478769 CDK2AP2O75956 126 aa8.6□□□□□ -1.03
NUDCD3-207ENST00000478769 PFN2P35080 140 aa8.6□□□□□ -1.03
NUDCD3-207ENST00000478769 HERV-K104P63124 156 aa8.6□□□□□ -1.03
NUDCD3-207ENST00000478769 PYY3Q5JQD4 70 aa8.59□□□□□ -1.03
NUDCD3-207ENST00000478769 C9orf129Q5T035 196 aaKnown RBP8.59□□□□□ -1.03
NUDCD3-207ENST00000478769 CIRBP-AS1Q8TBR5 109 aa8.59□□□□□ -1.03
NUDCD3-207ENST00000478769 LINC00474Q9P2X8 69 aa8.59□□□□□ -1.03
NUDCD3-207ENST00000478769 A0A087WYN8 130 aa8.58□□□□□ -1.04
NUDCD3-207ENST00000478769 HSBP1L1C9JCN9 74 aa8.58□□□□□ -1.04
NUDCD3-207ENST00000478769 SMIM13P0DJ93 91 aa8.58□□□□□ -1.04
NUDCD3-207ENST00000478769 MEIG1Q5JSS6 88 aa8.58□□□□□ -1.04
NUDCD3-207ENST00000478769 XAGE1AQ9HD64 81 aa8.58□□□□□ -1.04
NUDCD3-207ENST00000478769 A0A0J9YXY3 114 aa8.57□□□□□ -1.04
NUDCD3-207ENST00000478769 A0A0U1RRA0 63 aa8.57□□□□□ -1.04
NUDCD3-207ENST00000478769 FAM168BA1KXE4 195 aa8.57□□□□□ -1.04
NUDCD3-207ENST00000478769 ZNF815PA8K554 130 aa8.57□□□□□ -1.04
NUDCD3-207ENST00000478769 COX17Q14061 63 aa8.57□□□□□ -1.04
NUDCD3-207ENST00000478769 PCP2Q8IVA1 136 aa8.57□□□□□ -1.04
NUDCD3-207ENST00000478769 LINC00158P58513 81 aa8.56□□□□□ -1.04
NUDCD3-207ENST00000478769 PLAC8Q9NZF1 115 aa8.56□□□□□ -1.04
NUDCD3-207ENST00000478769 A0A1W2PNN7 141 aa8.55□□□□□ -1.04
NUDCD3-207ENST00000478769 KRTAP7-1Q8IUC3 87 aa8.55□□□□□ -1.04
NUDCD3-207ENST00000478769 DPH3Q96FX2 82 aa8.55□□□□□ -1.04
NUDCD3-207ENST00000478769 SND1-IT1Q9HBX3 110 aa8.55□□□□□ -1.04
NUDCD3-207ENST00000478769 MIR7-3HGQ8N6C7 128 aa8.54□□□□□ -1.04
NUDCD3-207ENST00000478769 DAND5Q8N907 189 aa8.54□□□□□ -1.04
NUDCD3-207ENST00000478769 VAMP8Q9BV40 100 aa8.54□□□□□ -1.04
NUDCD3-207ENST00000478769 TP73-AS1Q9UF72 201 aa8.54□□□□□ -1.04
NUDCD3-207ENST00000478769 PAM16Q9Y3D7 125 aa8.54□□□□□ -1.04
NUDCD3-207ENST00000478769 VPS13BQ7Z7G8 4022 aa8.53□□□□□ -1.04
NUDCD3-207ENST00000478769 EPM2AB3EWF7 344 aa8.53□□□□□ -1.04
NUDCD3-207ENST00000478769 SERTAD4-AS1Q5TG53 156 aa8.53□□□□□ -1.04
NUDCD3-207ENST00000478769 FAM19A5Q7Z5A7 132 aaPredicted RBP8.53□□□□□ -1.04
NUDCD3-207ENST00000478769 LITAFQ99732 161 aa8.53□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 82.4 ms