RNA–Protein interactions for RNA: ENST00000477538.1

VHL-203, Transcript of von Hippel-Lindau tumor suppressor, humanhuman

TSL 1 (best)

Gene VHL, Length 958 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VHL-203ENST00000477538 IGLV5-52A0A0A0MRZ9 124 aa10.51□□□□□ -0.73
VHL-203ENST00000477538 HSBP1L1C9JCN9 74 aa10.51□□□□□ -0.73
VHL-203ENST00000477538 J3QQQ9 107 aa10.51□□□□□ -0.73
VHL-203ENST00000477538 TSPEAR-AS2P59090 65 aa10.51□□□□□ -0.73
VHL-203ENST00000477538 MAJINQ3KP22 176 aa10.51□□□□□ -0.73
VHL-203ENST00000477538 ANKRD39Q53RE8 183 aa10.51□□□□□ -0.73
VHL-203ENST00000477538 PYY3Q5JQD4 70 aa10.51□□□□□ -0.73
VHL-203ENST00000477538 FAT2Q9NYQ8 4349 aa10.51□□□□□ -0.73
VHL-203ENST00000477538 LGALS3P17931 250 aaKnown RBP10.5□□□□□ -0.73
VHL-203ENST00000477538 C10orf25Q5T742 122 aa10.5□□□□□ -0.73
VHL-203ENST00000477538 CDPF1Q6NVV7 123 aa10.5□□□□□ -0.73
VHL-203ENST00000477538 PGPEP1Q9NXJ5 209 aa10.5□□□□□ -0.73
VHL-203ENST00000477538 IGKV2D-26A0A0A0MRZ7 120 aa10.49□□□□□ -0.73
VHL-203ENST00000477538 LOC105371267A0A1B0GV96 52 aa10.49□□□□□ -0.73
VHL-203ENST00000477538 TRBV30A0A0K0K1B3 111 aa10.48□□□□□ -0.73
VHL-203ENST00000477538 SFTA2Q6UW10 78 aa10.48□□□□□ -0.73
VHL-203ENST00000477538 C9orf163Q8N9P6 203 aa10.48□□□□□ -0.73
VHL-203ENST00000477538 ZNF625Q96I27 306 aaPredicted RBP10.48□□□□□ -0.73
VHL-203ENST00000477538 C6orf48Q9UBA6 75 aa10.48□□□□□ -0.73
VHL-203ENST00000477538 NDUFA12Q9UI09 145 aa10.48□□□□□ -0.73
VHL-203ENST00000477538 RNF151Q2KHN1 245 aa10.47□□□□□ -0.73
VHL-203ENST00000477538 PKD1P98161 4303 aa10.47□□□□□ -0.73
VHL-203ENST00000477538 MYMXA0A1B0GTQ4 84 aa10.46□□□□□ -0.73
VHL-203ENST00000477538 NMUP48645 174 aa10.46□□□□□ -0.73
VHL-203ENST00000477538 LINC01620Q4KN68 170 aa10.46□□□□□ -0.73
VHL-203ENST00000477538 C9orf116Q5BN46 136 aaPredicted RBP10.45□□□□□ -0.74
VHL-203ENST00000477538 VAMP8Q9BV40 100 aa10.45□□□□□ -0.74
VHL-203ENST00000477538 HECTD4Q9Y4D8 3996 aa10.44□□□□□ -0.74
VHL-203ENST00000477538 DNAH11Q96DT5 4516 aa10.44□□□□□ -0.74
VHL-203ENST00000477538 HERV-K104P63124 156 aa10.44□□□□□ -0.74
VHL-203ENST00000477538 TTTY13Q9BZ97 58 aa10.44□□□□□ -0.74
VHL-203ENST00000477538 GCSHP23434 173 aa10.43□□□□□ -0.74
VHL-203ENST00000477538 PAM16Q9Y3D7 125 aa10.43□□□□□ -0.74
VHL-203ENST00000477538 LOC107984640A0A0U1RRK4 108 aa10.42□□□□□ -0.74
VHL-203ENST00000477538 ZNF815PA8K554 130 aa10.42□□□□□ -0.74
VHL-203ENST00000477538 SPATA45Q537H7 98 aa10.42□□□□□ -0.74
VHL-203ENST00000477538 PKIGQ9Y2B9 76 aa10.42□□□□□ -0.74
VHL-203ENST00000477538 C16orf90A8MZG2 172 aa10.41□□□□□ -0.74
VHL-203ENST00000477538 PCP2Q8IVA1 136 aa10.41□□□□□ -0.74
VHL-203ENST00000477538 ERG28Q9UKR5 140 aa10.41□□□□□ -0.74
VHL-203ENST00000477538 TLX1NBP0CAT3 122 aa10.4□□□□□ -0.74
VHL-203ENST00000477538 SMIM6P0DI80 62 aa10.4□□□□□ -0.74
VHL-203ENST00000477538 PFN2P35080 140 aa10.4□□□□□ -0.74
VHL-203ENST00000477538 RPL18AQ02543 176 aaKnown RBP10.4□□□□□ -0.74
VHL-203ENST00000477538 MEIG1Q5JSS6 88 aa10.4□□□□□ -0.74
VHL-203ENST00000477538 SDIM1Q6ZPB5 146 aa10.4□□□□□ -0.74
VHL-203ENST00000477538 NDUFC2-KCTD14E9PQ53 114 aa10.39□□□□□ -0.75
VHL-203ENST00000477538 A0A0J9YXY3 114 aa10.38□□□□□ -0.75
VHL-203ENST00000477538 KRTAP10-1P60331 282 aa10.38□□□□□ -0.75
VHL-203ENST00000477538 COX17Q14061 63 aa10.38□□□□□ -0.75
VHL-203ENST00000477538 A0A096LNI7 61 aa10.37□□□□□ -0.75
VHL-203ENST00000477538 LINC00587B1AMM8 73 aa10.37□□□□□ -0.75
VHL-203ENST00000477538 SMIM13P0DJ93 91 aa10.37□□□□□ -0.75
VHL-203ENST00000477538 LINC00158P58513 81 aa10.37□□□□□ -0.75
VHL-203ENST00000477538 S100A12P80511 92 aa10.37□□□□□ -0.75
VHL-203ENST00000477538 GAGE2BQ13066 116 aa10.37□□□□□ -0.75
VHL-203ENST00000477538 Q6ZRP5 223 aa10.37□□□□□ -0.75
VHL-203ENST00000477538 IGKV2-24A0A0C4DH68 120 aa10.36□□□□□ -0.75
VHL-203ENST00000477538 A0A0U1RRA0 63 aa10.36□□□□□ -0.75
VHL-203ENST00000477538 COX8AP10176 69 aa10.36□□□□□ -0.75
VHL-203ENST00000477538 PTTG1IPP53801 180 aa10.36□□□□□ -0.75
VHL-203ENST00000477538 GAGE2EQ4V326 116 aa10.36□□□□□ -0.75
VHL-203ENST00000477538 GAGE2DQ9UEU5 116 aa10.36□□□□□ -0.75
VHL-203ENST00000477538 DNAH5Q8TE73 4624 aa10.35□□□□□ -0.75
VHL-203ENST00000477538 SCGB1D4Q6XE38 83 aa10.35□□□□□ -0.75
VHL-203ENST00000477538 C14orf144Q96I85 54 aa10.35□□□□□ -0.75
VHL-203ENST00000477538 CHTF8P0CG12 524 aa10.34□□□□□ -0.75
VHL-203ENST00000477538 CIRBPQ14011 172 aaKnown RBP10.34□□□□□ -0.75
VHL-203ENST00000477538 BOD1L2Q8IYS8 172 aa10.34□□□□□ -0.75
VHL-203ENST00000477538 TP73-AS1Q9UF72 201 aa10.34□□□□□ -0.75
VHL-203ENST00000477538 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP10.33□□□□□ -0.76
VHL-203ENST00000477538 PANO1I0J062 215 aa10.32□□□□□ -0.76
VHL-203ENST00000477538 DLEU1O43261 78 aa10.32□□□□□ -0.76
VHL-203ENST00000477538 TIMM17BO60830 172 aa10.32□□□□□ -0.76
VHL-203ENST00000477538 Q6ZSA8 131 aa10.32□□□□□ -0.76
VHL-203ENST00000477538 MIR7-3HGQ8N6C7 128 aa10.32□□□□□ -0.76
VHL-203ENST00000477538 LINC00474Q9P2X8 69 aa10.32□□□□□ -0.76
VHL-203ENST00000477538 PKHD1P08F94 4074 aa10.31□□□□□ -0.76
VHL-203ENST00000477538 SLC25A34Q6PIV7 304 aa10.31□□□□□ -0.76
VHL-203ENST00000477538 DAND5Q8N907 189 aa10.31□□□□□ -0.76
VHL-203ENST00000477538 SPACA4Q8TDM5 124 aa10.31□□□□□ -0.76
VHL-203ENST00000477538 LITAFQ99732 161 aa10.31□□□□□ -0.76
VHL-203ENST00000477538 SND1-IT1Q9HBX3 110 aa10.31□□□□□ -0.76
VHL-203ENST00000477538 XAGE1AQ9HD64 81 aa10.31□□□□□ -0.76
VHL-203ENST00000477538 FAM30AQ9NZY2 134 aa10.31□□□□□ -0.76
VHL-203ENST00000477538 TMEM238C9JI98 176 aa10.3□□□□□ -0.76
VHL-203ENST00000477538 C9orf129Q5T035 196 aaKnown RBP10.3□□□□□ -0.76
VHL-203ENST00000477538 ADAMTSL4-AS1Q5T5F5 129 aa10.3□□□□□ -0.76
VHL-203ENST00000477538 DPH3Q96FX2 82 aa10.29□□□□□ -0.76
VHL-203ENST00000477538 C12orf57Q99622 126 aa10.29□□□□□ -0.76
VHL-203ENST00000477538 SPANXDQ9BXN6 97 aa10.26□□□□□ -0.77
VHL-203ENST00000477538 SPANXCQ9NY87 97 aa10.26□□□□□ -0.77
VHL-203ENST00000477538 A0A087WYN8 130 aa10.25□□□□□ -0.77
VHL-203ENST00000477538 FAM168BA1KXE4 195 aa10.25□□□□□ -0.77
VHL-203ENST00000477538 NPC2P61916 151 aa10.25□□□□□ -0.77
VHL-203ENST00000477538 MIEN1Q9BRT3 115 aa10.25□□□□□ -0.77
VHL-203ENST00000477538 SPANXB1Q9NS25 103 aaPredicted RBP10.25□□□□□ -0.77
VHL-203ENST00000477538 A0A1W2PNN7 141 aa10.24□□□□□ -0.77
VHL-203ENST00000477538 SCXQ7RTU7 201 aa10.24□□□□□ -0.77
VHL-203ENST00000477538 FAM19A5Q7Z5A7 132 aaPredicted RBP10.24□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 102.1 ms