RNA–Protein interactions for RNA: ENST00000477264.1

CLSTN1-205, Transcript of calsyntenin 1, humanhuman

TSL 2

Gene CLSTN1, Length 2,169 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN1-205ENST00000477264 OXTP01178 125 aa10.8□□□□□ -0.68
CLSTN1-205ENST00000477264 Q5XG85 94 aa10.8□□□□□ -0.68
CLSTN1-205ENST00000477264 C10orf99Q6UWK7 81 aa10.8□□□□□ -0.68
CLSTN1-205ENST00000477264 MRAPQ8TCY5 172 aa10.8□□□□□ -0.68
CLSTN1-205ENST00000477264 LINC00167Q96N53 147 aa10.79□□□□□ -0.68
CLSTN1-205ENST00000477264 IL17DQ8TAD2 202 aa10.79□□□□□ -0.68
CLSTN1-205ENST00000477264 UBE2L6O14933 153 aa10.78□□□□□ -0.68
CLSTN1-205ENST00000477264 CCL18P55774 89 aa10.78□□□□□ -0.68
CLSTN1-205ENST00000477264 TMEM243Q9BU79 118 aa10.78□□□□□ -0.68
CLSTN1-205ENST00000477264 NCR3O14931 201 aa10.77□□□□□ -0.68
CLSTN1-205ENST00000477264 GHRHP01286 108 aa10.77□□□□□ -0.68
CLSTN1-205ENST00000477264 RNASE1P07998 156 aaKnown RBP10.77□□□□□ -0.68
CLSTN1-205ENST00000477264 LINC00158P58513 81 aa10.77□□□□□ -0.68
CLSTN1-205ENST00000477264 NTM-AS1Q6ZSK4 140 aa10.77□□□□□ -0.68
CLSTN1-205ENST00000477264 UBE2E2Q96LR5 201 aa10.77□□□□□ -0.68
CLSTN1-205ENST00000477264 HILS1P60008 231 aa10.77□□□□□ -0.69
CLSTN1-205ENST00000477264 LYPD5Q6UWN5 251 aa10.77□□□□□ -0.69
CLSTN1-205ENST00000477264 FHL2Q14192 279 aa10.76□□□□□ -0.69
CLSTN1-205ENST00000477264 MTORP42345 2549 aa10.76□□□□□ -0.69
CLSTN1-205ENST00000477264 TRBV6-4A0A1B0GX49 114 aa10.75□□□□□ -0.69
CLSTN1-205ENST00000477264 INAFM1C9JVW0 142 aa10.75□□□□□ -0.69
CLSTN1-205ENST00000477264 SETXQ7Z333 2677 aaKnown RBP10.75□□□□□ -0.69
CLSTN1-205ENST00000477264 FLNBO75369 2602 aaKnown RBP10.75□□□□□ -0.69
CLSTN1-205ENST00000477264 PRM2P04554 102 aa10.75□□□□□ -0.69
CLSTN1-205ENST00000477264 MAP6D1Q9H9H5 199 aa10.75□□□□□ -0.69
CLSTN1-205ENST00000477264 FAM236DA0A1B0GTK5 79 aa10.74□□□□□ -0.69
CLSTN1-205ENST00000477264 FAM236CP0DP71 79 aa10.74□□□□□ -0.69
CLSTN1-205ENST00000477264 SS18Q15532 418 aa10.74□□□□□ -0.69
CLSTN1-205ENST00000477264 C4orf26Q17RF5 130 aa10.74□□□□□ -0.69
CLSTN1-205ENST00000477264 CUBNO60494 3623 aa10.74□□□□□ -0.69
CLSTN1-205ENST00000477264 ANK3Q12955 4377 aaKnown RBP10.73□□□□□ -0.69
CLSTN1-205ENST00000477264 HRCT1Q6UXD1 115 aa10.73□□□□□ -0.69
CLSTN1-205ENST00000477264 SERP1Q9Y6X1 66 aa10.73□□□□□ -0.69
CLSTN1-205ENST00000477264 EPM2AB3EWF7 344 aa10.72□□□□□ -0.69
CLSTN1-205ENST00000477264 TMEM256-PLSCR3K7ERE1 68 aa10.72□□□□□ -0.69
CLSTN1-205ENST00000477264 PAX4O43316 350 aa10.72□□□□□ -0.69
CLSTN1-205ENST00000477264 KHDC1LQ5JSQ8 128 aa10.72□□□□□ -0.69
CLSTN1-205ENST00000477264 UBL5Q9BZL1 73 aa10.72□□□□□ -0.69
CLSTN1-205ENST00000477264 TOMM7Q9P0U1 55 aa10.72□□□□□ -0.69
CLSTN1-205ENST00000477264 TRGV1A0A0A0MS02 117 aa10.72□□□□□ -0.69
CLSTN1-205ENST00000477264 A0A1W2PRX2 142 aa10.71□□□□□ -0.69
CLSTN1-205ENST00000477264 C16orf95Q9H693 158 aa10.7□□□□□ -0.7
CLSTN1-205ENST00000477264 HIVEP1P15822 2718 aa10.69□□□□□ -0.7
CLSTN1-205ENST00000477264 NF1P21359 2839 aa10.69□□□□□ -0.7
CLSTN1-205ENST00000477264 A0A087WZ39 114 aa10.69□□□□□ -0.7
CLSTN1-205ENST00000477264 C11orf44Q8N8P7 122 aa10.69□□□□□ -0.7
CLSTN1-205ENST00000477264 LINC01006Q8NI28 216 aa10.69□□□□□ -0.7
CLSTN1-205ENST00000477264 TRAV7A0A075B6U4 112 aa10.69□□□□□ -0.7
CLSTN1-205ENST00000477264 IGHV3OR16-9A0A0B4J2B5 98 aa10.69□□□□□ -0.7
CLSTN1-205ENST00000477264 TRAV23DV6A0A075B6W5 121 aa10.68□□□□□ -0.7
CLSTN1-205ENST00000477264 SLPIP03973 132 aa10.68□□□□□ -0.7
CLSTN1-205ENST00000477264 XCL1P47992 114 aa10.68□□□□□ -0.7
CLSTN1-205ENST00000477264 C4orf3Q8WVX3 66 aa10.68□□□□□ -0.7
CLSTN1-205ENST00000477264 XCL2Q9UBD3 114 aa10.68□□□□□ -0.7
CLSTN1-205ENST00000477264 SORL1Q92673 2214 aa10.68□□□□□ -0.7
CLSTN1-205ENST00000477264 DYNLRB2Q8TF09 96 aa10.67□□□□□ -0.7
CLSTN1-205ENST00000477264 SLURP1P55000 103 aa10.67□□□□□ -0.7
CLSTN1-205ENST00000477264 Q8N814 137 aa10.67□□□□□ -0.7
CLSTN1-205ENST00000477264 ENHOQ6UWT2 76 aa10.66□□□□□ -0.7
CLSTN1-205ENST00000477264 C20orf197Q8N268 126 aa10.66□□□□□ -0.7
CLSTN1-205ENST00000477264 NSD1Q96L73 2696 aaPredicted RBP10.66□□□□□ -0.7
CLSTN1-205ENST00000477264 CYSRT1A8MQ03 144 aa10.66□□□□□ -0.7
CLSTN1-205ENST00000477264 PFN2P35080 140 aa10.66□□□□□ -0.7
CLSTN1-205ENST00000477264 DEFB136Q30KP8 78 aa10.66□□□□□ -0.7
CLSTN1-205ENST00000477264 C18orf65Q6ZTR6 163 aa10.66□□□□□ -0.7
CLSTN1-205ENST00000477264 FAM19A1Q7Z5A9 133 aa10.65□□□□□ -0.71
CLSTN1-205ENST00000477264 C1orf158Q8N1D5 194 aa10.65□□□□□ -0.71
CLSTN1-205ENST00000477264 KLKP1Q107X0 134 aa10.64□□□□□ -0.71
CLSTN1-205ENST00000477264 Q6ZTI0 123 aa10.63□□□□□ -0.71
CLSTN1-205ENST00000477264 PRO0628Q9UI54 55 aa10.63□□□□□ -0.71
CLSTN1-205ENST00000477264 H7BZZ5 65 aa10.63□□□□□ -0.71
CLSTN1-205ENST00000477264 STHQ8IWL8 128 aa10.63□□□□□ -0.71
CLSTN1-205ENST00000477264 LOC110117498A0A087WWA1 95 aa10.62□□□□□ -0.71
CLSTN1-205ENST00000477264 ATP5EP56381 51 aaPredicted RBP10.62□□□□□ -0.71
CLSTN1-205ENST00000477264 FN1P02751 2386 aaKnown RBP10.61□□□□□ -0.71
CLSTN1-205ENST00000477264 DEFB114Q30KQ6 69 aa10.61□□□□□ -0.71
CLSTN1-205ENST00000477264 Q8IZM0 81 aa10.61□□□□□ -0.71
CLSTN1-205ENST00000477264 LINC00482Q8N8I6 264 aa10.6□□□□□ -0.71
CLSTN1-205ENST00000477264 H3BQ85 93 aa10.6□□□□□ -0.71
CLSTN1-205ENST00000477264 NDUFC1O43677 76 aa10.6□□□□□ -0.71
CLSTN1-205ENST00000477264 C6orf226Q5I0X4 101 aa10.6□□□□□ -0.71
CLSTN1-205ENST00000477264 WFDC9Q8NEX5 89 aa10.6□□□□□ -0.71
CLSTN1-205ENST00000477264 TRBV6-8A0A0A6YYG3 113 aa10.59□□□□□ -0.71
CLSTN1-205ENST00000477264 F8P00451 2351 aa10.59□□□□□ -0.71
CLSTN1-205ENST00000477264 SMIM26A0A096LP01 95 aa10.59□□□□□ -0.71
CLSTN1-205ENST00000477264 ZNF561-AS1K7EIQ3 104 aa10.59□□□□□ -0.71
CLSTN1-205ENST00000477264 NANOS2P60321 138 aaKnown RBP10.59□□□□□ -0.71
CLSTN1-205ENST00000477264 Q6ZQT0 140 aa10.59□□□□□ -0.71
CLSTN1-205ENST00000477264 C16orf74Q96GX8 76 aa10.59□□□□□ -0.71
CLSTN1-205ENST00000477264 IGLV4-60A0A075B6I1 120 aa10.58□□□□□ -0.72
CLSTN1-205ENST00000477264 CCL24O00175 119 aa10.58□□□□□ -0.72
CLSTN1-205ENST00000477264 PDE6GP18545 87 aa10.58□□□□□ -0.72
CLSTN1-205ENST00000477264 ODF3L2Q3SX64 289 aa10.58□□□□□ -0.72
CLSTN1-205ENST00000477264 SETD2Q9BYW2 2564 aaPredicted RBP10.58□□□□□ -0.72
CLSTN1-205ENST00000477264 IGKV3OR2-268A0A0C4DH90 116 aa10.58□□□□□ -0.72
CLSTN1-205ENST00000477264 COX17Q14061 63 aa10.58□□□□□ -0.72
CLSTN1-205ENST00000477264 LINC00959A0A1B0GUT2 108 aa10.56□□□□□ -0.72
CLSTN1-205ENST00000477264 CXCL6P80162 114 aa10.56□□□□□ -0.72
CLSTN1-205ENST00000477264 RBM3P98179 157 aaKnown RBP10.56□□□□□ -0.72
CLSTN1-205ENST00000477264 C6orf223Q8N319 242 aa10.56□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 190 ms