RNA–Protein interactions for RNA: ENST00000477052.1

VARS2-208, Transcript of valyl-tRNA synthetase 2, mitochondrial, humanhuman

TSL 3

Gene VARS2, Length 552 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS2-208ENST00000477052 PMCHL1Q16048 86 aa7.2□□□□□ -1.26
VARS2-208ENST00000477052 SPINK6Q6UWN8 80 aa7.2□□□□□ -1.26
VARS2-208ENST00000477052 ORAOV1Q8WV07 137 aa7.2□□□□□ -1.26
VARS2-208ENST00000477052 CAMK2N2Q96S95 79 aa7.2□□□□□ -1.26
VARS2-208ENST00000477052 LOC107984640A0A0U1RRK4 108 aa7.19□□□□□ -1.26
VARS2-208ENST00000477052 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP7.19□□□□□ -1.26
VARS2-208ENST00000477052 RPL39P62891 51 aaKnown RBP7.19□□□□□ -1.26
VARS2-208ENST00000477052 RPL18AQ02543 176 aaKnown RBP7.19□□□□□ -1.26
VARS2-208ENST00000477052 Q6ZRP5 223 aa7.19□□□□□ -1.26
VARS2-208ENST00000477052 C9orf116Q5BN46 136 aaPredicted RBP7.18□□□□□ -1.26
VARS2-208ENST00000477052 REG3GQ6UW15 175 aa7.18□□□□□ -1.26
VARS2-208ENST00000477052 PHF5AQ7RTV0 110 aaKnown RBP7.18□□□□□ -1.26
VARS2-208ENST00000477052 MRPL18Q9H0U6 180 aaKnown RBP7.18□□□□□ -1.26
VARS2-208ENST00000477052 MAP1LC3AQ9H492 121 aa7.18□□□□□ -1.26
VARS2-208ENST00000477052 APOMO95445 188 aa7.17□□□□□ -1.26
VARS2-208ENST00000477052 SPAG11BQ08648 103 aa7.17□□□□□ -1.26
VARS2-208ENST00000477052 KIAA1644Q3SXP7 199 aa7.17□□□□□ -1.26
VARS2-208ENST00000477052 FAM104AQ969W3 186 aa7.17□□□□□ -1.26
VARS2-208ENST00000477052 PSORS1C2Q9UIG4 136 aa7.17□□□□□ -1.26
VARS2-208ENST00000477052 BATFQ16520 125 aa7.16□□□□□ -1.26
VARS2-208ENST00000477052 ANKRD39Q53RE8 183 aa7.16□□□□□ -1.26
VARS2-208ENST00000477052 PKIGQ9Y2B9 76 aa7.16□□□□□ -1.26
VARS2-208ENST00000477052 CSDC2Q9Y534 153 aaKnown RBP7.16□□□□□ -1.26
VARS2-208ENST00000477052 LOC389332A0A1B0GUA5 103 aa7.15□□□□□ -1.26
VARS2-208ENST00000477052 FAM168BA1KXE4 195 aa7.15□□□□□ -1.26
VARS2-208ENST00000477052 SMAGPQ0VAQ4 97 aa7.15□□□□□ -1.26
VARS2-208ENST00000477052 C10orf25Q5T742 122 aa7.15□□□□□ -1.26
VARS2-208ENST00000477052 KRTAP11-1Q8IUC1 163 aa7.15□□□□□ -1.26
VARS2-208ENST00000477052 Q8N8P6 123 aa7.15□□□□□ -1.26
VARS2-208ENST00000477052 ALKBH7Q9BT30 221 aaPredicted RBP7.15□□□□□ -1.26
VARS2-208ENST00000477052 NXT2Q9NPJ8 142 aaKnown RBP7.15□□□□□ -1.26
VARS2-208ENST00000477052 PAM16Q9Y3D7 125 aa7.15□□□□□ -1.26
VARS2-208ENST00000477052 K7EMI3 77 aa7.14□□□□□ -1.27
VARS2-208ENST00000477052 KRTDAPP60985 99 aa7.14□□□□□ -1.27
VARS2-208ENST00000477052 SPATA45Q537H7 98 aa7.14□□□□□ -1.27
VARS2-208ENST00000477052 C1orf137Q5JT78 98 aa7.14□□□□□ -1.27
VARS2-208ENST00000477052 Q6ZN92 141 aa7.14□□□□□ -1.27
VARS2-208ENST00000477052 C2orf48Q96LS8 159 aa7.14□□□□□ -1.27
VARS2-208ENST00000477052 TIMM21Q9BVV7 248 aa7.14□□□□□ -1.27
VARS2-208ENST00000477052 SERF1AO75920 110 aa7.13□□□□□ -1.27
VARS2-208ENST00000477052 UBE2V1Q13404 147 aa7.13□□□□□ -1.27
VARS2-208ENST00000477052 UNQ6190/PRO20217Q6UXQ8 127 aa7.13□□□□□ -1.27
VARS2-208ENST00000477052 NPSP0C0P6 89 aa7.12□□□□□ -1.27
VARS2-208ENST00000477052 IFI27P40305 119 aaPredicted RBP7.12□□□□□ -1.27
VARS2-208ENST00000477052 ORMDL2Q53FV1 153 aa7.12□□□□□ -1.27
VARS2-208ENST00000477052 SPANXA1Q9NS26 97 aa7.12□□□□□ -1.27
VARS2-208ENST00000477052 LPAP08519 4548 aa7.11□□□□□ -1.27
VARS2-208ENST00000477052 IGHV3OR16-9A0A0B4J2B5 98 aa7.11□□□□□ -1.27
VARS2-208ENST00000477052 LINC01546A6NGU7 62 aa7.11□□□□□ -1.27
VARS2-208ENST00000477052 HSBP1L1C9JCN9 74 aa7.11□□□□□ -1.27
VARS2-208ENST00000477052 GAGE2EQ4V326 116 aa7.11□□□□□ -1.27
VARS2-208ENST00000477052 FAM19A5Q7Z5A7 132 aaPredicted RBP7.11□□□□□ -1.27
VARS2-208ENST00000477052 PRR26Q8N8Z3 221 aa7.11□□□□□ -1.27
VARS2-208ENST00000477052 GAGE2DQ9UEU5 116 aa7.11□□□□□ -1.27
VARS2-208ENST00000477052 A0A087WZ39 114 aa7.1□□□□□ -1.27
VARS2-208ENST00000477052 IGLC3P0DOY3 106 aa7.1□□□□□ -1.27
VARS2-208ENST00000477052 MRPS36P82909 103 aaKnown RBP7.1□□□□□ -1.27
VARS2-208ENST00000477052 ZC2HC1BQ5TFG8 222 aa7.1□□□□□ -1.27
VARS2-208ENST00000477052 KRTAP7-1Q8IUC3 87 aa7.1□□□□□ -1.27
VARS2-208ENST00000477052 C6orf48Q9UBA6 75 aa7.1□□□□□ -1.27
VARS2-208ENST00000477052 CYSLTR1Q9Y271 337 aa7.1□□□□□ -1.27
VARS2-208ENST00000477052 PYGO1Q9Y3Y4 419 aa7.1□□□□□ -1.27
VARS2-208ENST00000477052 HSBP1O75506 76 aa7.09□□□□□ -1.27
VARS2-208ENST00000477052 RNF151Q2KHN1 245 aa7.09□□□□□ -1.27
VARS2-208ENST00000477052 C2orf66Q6UXQ4 117 aa7.09□□□□□ -1.27
VARS2-208ENST00000477052 C18orf32Q8TCD1 76 aa7.09□□□□□ -1.27
VARS2-208ENST00000477052 PMCHL2Q9BQD1 86 aa7.09□□□□□ -1.27
VARS2-208ENST00000477052 MRPL35Q9NZE8 188 aaKnown RBP7.09□□□□□ -1.27
VARS2-208ENST00000477052 NDUFA1O15239 70 aa7.08□□□□□ -1.28
VARS2-208ENST00000477052 IGLV7-43P04211 117 aa7.08□□□□□ -1.28
VARS2-208ENST00000477052 C2orf82Q6UX34 121 aa7.08□□□□□ -1.28
VARS2-208ENST00000477052 FA2HQ7L5A8 372 aa7.08□□□□□ -1.28
VARS2-208ENST00000477052 IGLV4-3A0A075B6K6 122 aa7.07□□□□□ -1.28
VARS2-208ENST00000477052 LINC01549A6NIU2 74 aa7.07□□□□□ -1.28
VARS2-208ENST00000477052 K7ERU9 68 aa7.07□□□□□ -1.28
VARS2-208ENST00000477052 NUPR1O60356 82 aa7.07□□□□□ -1.28
VARS2-208ENST00000477052 KIAA0087Q14695 138 aa7.07□□□□□ -1.28
VARS2-208ENST00000477052 TOMM6Q96B49 74 aa7.07□□□□□ -1.28
VARS2-208ENST00000477052 IGIPA6NJ69 53 aa7.06□□□□□ -1.28
VARS2-208ENST00000477052 C3orf79P0CE67 100 aa7.06□□□□□ -1.28
VARS2-208ENST00000477052 VAMP3Q15836 100 aa7.06□□□□□ -1.28
VARS2-208ENST00000477052 LINC00242Q5T6M2 205 aa7.06□□□□□ -1.28
VARS2-208ENST00000477052 URB1-AS1Q96HZ7 61 aa7.06□□□□□ -1.28
VARS2-208ENST00000477052 TMEM141Q96I45 108 aa7.06□□□□□ -1.28
VARS2-208ENST00000477052 C21orf62-AS1Q17RA5 79 aa7.05□□□□□ -1.28
VARS2-208ENST00000477052 DIRC1Q969H9 104 aa7.05□□□□□ -1.28
VARS2-208ENST00000477052 CHCHD1Q96BP2 118 aaKnown RBP7.05□□□□□ -1.28
VARS2-208ENST00000477052 TIMM17AQ99595 171 aa7.05□□□□□ -1.28
VARS2-208ENST00000477052 H0Y9J4 135 aa7.04□□□□□ -1.28
VARS2-208ENST00000477052 M0QXV9 152 aa7.04□□□□□ -1.28
VARS2-208ENST00000477052 UBE2BP63146 152 aa7.04□□□□□ -1.28
VARS2-208ENST00000477052 C9orf129Q5T035 196 aaKnown RBP7.04□□□□□ -1.28
VARS2-208ENST00000477052 ERASQ7Z444 233 aa7.04□□□□□ -1.28
VARS2-208ENST00000477052 AMELXQ99217 191 aa7.04□□□□□ -1.28
VARS2-208ENST00000477052 VPS25Q9BRG1 176 aa7.04□□□□□ -1.28
VARS2-208ENST00000477052 HSPB8Q9UJY1 196 aa7.04□□□□□ -1.28
VARS2-208ENST00000477052 TLX1NBP0CAT3 122 aa7.03□□□□□ -1.28
VARS2-208ENST00000477052 HINT1P49773 126 aaPredicted RBP7.03□□□□□ -1.28
VARS2-208ENST00000477052 PAPPA-AS1Q5QFB9 102 aa7.03□□□□□ -1.28
VARS2-208ENST00000477052 SLC25A34Q6PIV7 304 aa7.03□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms