RNA–Protein interactions for RNA: ENST00000475657.1

FAM3A-218, Transcript of family with sequence similarity 3 member A, humanhuman

TSL 2

Gene FAM3A, Length 585 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAM3A-218ENST00000475657 ZC2HC1BQ5TFG8 222 aa8.75□□□□□ -1.01
FAM3A-218ENST00000475657 FAM19A3Q7Z5A8 133 aa8.75□□□□□ -1.01
FAM3A-218ENST00000475657 IGHV3-64A0A075B6Q5 118 aa8.74□□□□□ -1.01
FAM3A-218ENST00000475657 hDV102S1A0JD36 115 aa8.74□□□□□ -1.01
FAM3A-218ENST00000475657 C3orf79P0CE67 100 aa8.74□□□□□ -1.01
FAM3A-218ENST00000475657 KRTDAPP60985 99 aa8.74□□□□□ -1.01
FAM3A-218ENST00000475657 SEC11AP67812 179 aa8.74□□□□□ -1.01
FAM3A-218ENST00000475657 PRR3P79522 188 aaKnown RBP8.74□□□□□ -1.01
FAM3A-218ENST00000475657 SPINK6Q6UWN8 80 aa8.74□□□□□ -1.01
FAM3A-218ENST00000475657 PET117Q6UWS5 81 aa8.74□□□□□ -1.01
FAM3A-218ENST00000475657 F8VRH5 84 aa8.73□□□□□ -1.01
FAM3A-218ENST00000475657 H0Y8G0 127 aa8.73□□□□□ -1.01
FAM3A-218ENST00000475657 CHCHD10Q8WYQ3 142 aaPredicted RBP8.73□□□□□ -1.01
FAM3A-218ENST00000475657 CHTOPQ9Y3Y2 248 aaKnown RBP8.73□□□□□ -1.01
FAM3A-218ENST00000475657 TINCRA0A1B0GVN0 87 aa8.72□□□□□ -1.01
FAM3A-218ENST00000475657 C20orf202A1L168 122 aa8.72□□□□□ -1.01
FAM3A-218ENST00000475657 SLPIP03973 132 aa8.72□□□□□ -1.01
FAM3A-218ENST00000475657 CHTF8P0CG12 524 aa8.72□□□□□ -1.01
FAM3A-218ENST00000475657 IGLC3P0DOY3 106 aa8.72□□□□□ -1.01
FAM3A-218ENST00000475657 HERVK_113P63121 156 aa8.72□□□□□ -1.01
FAM3A-218ENST00000475657 LINC00242Q5T6M2 205 aa8.72□□□□□ -1.01
FAM3A-218ENST00000475657 MRPL35Q9NZE8 188 aaKnown RBP8.72□□□□□ -1.01
FAM3A-218ENST00000475657 IGLV4-69A0A075B6H9 119 aa8.71□□□□□ -1.02
FAM3A-218ENST00000475657 XCL1P47992 114 aa8.71□□□□□ -1.02
FAM3A-218ENST00000475657 AKR1D1P51857 326 aa8.71□□□□□ -1.02
FAM3A-218ENST00000475657 LINC01545Q5VT33 79 aa8.71□□□□□ -1.02
FAM3A-218ENST00000475657 CD164L2Q6UWJ8 174 aa8.71□□□□□ -1.02
FAM3A-218ENST00000475657 OR10D4PQ8NGN7 298 aa8.71□□□□□ -1.02
FAM3A-218ENST00000475657 TRAV16A0A0A6YYK6 109 aaPredicted RBP8.7□□□□□ -1.02
FAM3A-218ENST00000475657 PLNP26678 52 aa8.7□□□□□ -1.02
FAM3A-218ENST00000475657 GEMIN7Q9H840 131 aaKnown RBP8.7□□□□□ -1.02
FAM3A-218ENST00000475657 IGLV5-45A0A087WSX0 123 aa8.69□□□□□ -1.02
FAM3A-218ENST00000475657 IGHV3OR16-9A0A0B4J2B5 98 aa8.69□□□□□ -1.02
FAM3A-218ENST00000475657 GAGE12HA6NDE8 117 aa8.69□□□□□ -1.02
FAM3A-218ENST00000475657 DPM2O94777 84 aa8.69□□□□□ -1.02
FAM3A-218ENST00000475657 FOXI1Q12951 378 aa8.69□□□□□ -1.02
FAM3A-218ENST00000475657 SRSF9Q13242 221 aaKnown RBP eCLIP8.69□□□□□ -1.02
FAM3A-218ENST00000475657 LCE2AQ5TA79 106 aaPredicted RBP8.69□□□□□ -1.02
FAM3A-218ENST00000475657 C11orf86A6NJI1 115 aa8.68□□□□□ -1.02
FAM3A-218ENST00000475657 A0A087WZ39 114 aa8.67□□□□□ -1.02
FAM3A-218ENST00000475657 COX7A2LO14548 114 aa8.67□□□□□ -1.02
FAM3A-218ENST00000475657 IGKCP01834 107 aa8.67□□□□□ -1.02
FAM3A-218ENST00000475657 ZNF22P17026 224 aaPredicted RBP8.67□□□□□ -1.02
FAM3A-218ENST00000475657 COX6A2Q02221 97 aa8.67□□□□□ -1.02
FAM3A-218ENST00000475657 HIGD2BQ4VC39 106 aa8.67□□□□□ -1.02
FAM3A-218ENST00000475657 LINC01561Q8N1V8 128 aa8.67□□□□□ -1.02
FAM3A-218ENST00000475657 LINC00469Q8N7U9 141 aa8.67□□□□□ -1.02
FAM3A-218ENST00000475657 PMCHL2Q9BQD1 86 aa8.67□□□□□ -1.02
FAM3A-218ENST00000475657 H3BRM9 83 aa8.66□□□□□ -1.02
FAM3A-218ENST00000475657 CDKN2A-AS1Q9UH64 79 aa8.66□□□□□ -1.02
FAM3A-218ENST00000475657 TMEM170BQ5T4T1 132 aa8.65□□□□□ -1.02
FAM3A-218ENST00000475657 C15orf56Q8N910 161 aa8.65□□□□□ -1.02
FAM3A-218ENST00000475657 MALP21145 153 aa8.64□□□□□ -1.03
FAM3A-218ENST00000475657 JOSD1Q15040 202 aaPredicted RBP8.64□□□□□ -1.03
FAM3A-218ENST00000475657 C5orf38Q86SI9 138 aa8.64□□□□□ -1.03
FAM3A-218ENST00000475657 IGKV2-24A0A0C4DH68 120 aa8.63□□□□□ -1.03
FAM3A-218ENST00000475657 APOMO95445 188 aa8.63□□□□□ -1.03
FAM3A-218ENST00000475657 SCGB1D1O95968 90 aa8.63□□□□□ -1.03
FAM3A-218ENST00000475657 IGHV1-58A0A0C4DH39 117 aa8.62□□□□□ -1.03
FAM3A-218ENST00000475657 SMIM1B2RUZ4 78 aa8.62□□□□□ -1.03
FAM3A-218ENST00000475657 MAJINQ3KP22 176 aa8.62□□□□□ -1.03
FAM3A-218ENST00000475657 CFAP161Q6P656 301 aa8.62□□□□□ -1.03
FAM3A-218ENST00000475657 LINC00526Q96FQ7 95 aa8.62□□□□□ -1.03
FAM3A-218ENST00000475657 IGLV5-39A0A0G2JS06 123 aa8.61□□□□□ -1.03
FAM3A-218ENST00000475657 TMEM223A0PJW6 202 aa8.61□□□□□ -1.03
FAM3A-218ENST00000475657 HERVK_113P61574 105 aa8.61□□□□□ -1.03
FAM3A-218ENST00000475657 STPG4Q8N801 248 aa8.61□□□□□ -1.03
FAM3A-218ENST00000475657 GVQW2A0A096LPI5 108 aaPredicted RBP8.6□□□□□ -1.03
FAM3A-218ENST00000475657 LOC105371267A0A1B0GV96 52 aa8.6□□□□□ -1.03
FAM3A-218ENST00000475657 SPINK8P0C7L1 97 aa8.6□□□□□ -1.03
FAM3A-218ENST00000475657 Q6ZRP5 223 aa8.6□□□□□ -1.03
FAM3A-218ENST00000475657 PYY3Q5JQD4 70 aa8.59□□□□□ -1.03
FAM3A-218ENST00000475657 ATOH7Q8N100 152 aa8.59□□□□□ -1.03
FAM3A-218ENST00000475657 ORAOV1Q8WV07 137 aa8.59□□□□□ -1.03
FAM3A-218ENST00000475657 SPAG11BQ08648 103 aa8.58□□□□□ -1.04
FAM3A-218ENST00000475657 Q8IZM0 81 aa8.58□□□□□ -1.04
FAM3A-218ENST00000475657 PSORS1C2Q9UIG4 136 aa8.58□□□□□ -1.04
FAM3A-218ENST00000475657 A0A096LNI7 61 aa8.57□□□□□ -1.04
FAM3A-218ENST00000475657 E9PLD3 99 aa8.57□□□□□ -1.04
FAM3A-218ENST00000475657 LINC00474Q9P2X8 69 aa8.57□□□□□ -1.04
FAM3A-218ENST00000475657 HSBP1L1C9JCN9 74 aa8.56□□□□□ -1.04
FAM3A-218ENST00000475657 ZNF561-AS1K7EIQ3 104 aa8.56□□□□□ -1.04
FAM3A-218ENST00000475657 PRSS2P07478 247 aa8.56□□□□□ -1.04
FAM3A-218ENST00000475657 COX7B2Q8TF08 81 aa8.56□□□□□ -1.04
FAM3A-218ENST00000475657 PLEKHB2Q96CS7 222 aa8.56□□□□□ -1.04
FAM3A-218ENST00000475657 F8WDY8 70 aa8.55□□□□□ -1.04
FAM3A-218ENST00000475657 LEPROTO15243 131 aa8.55□□□□□ -1.04
FAM3A-218ENST00000475657 SMIM6P0DI80 62 aa8.55□□□□□ -1.04
FAM3A-218ENST00000475657 CXCL5P42830 114 aa8.55□□□□□ -1.04
FAM3A-218ENST00000475657 KIAA0087Q14695 138 aa8.55□□□□□ -1.04
FAM3A-218ENST00000475657 C2orf48Q96LS8 159 aa8.55□□□□□ -1.04
FAM3A-218ENST00000475657 TOMM7Q9P0U1 55 aa8.55□□□□□ -1.04
FAM3A-218ENST00000475657 ANKRD39Q53RE8 183 aa8.54□□□□□ -1.04
FAM3A-218ENST00000475657 C6orf226Q5I0X4 101 aa8.54□□□□□ -1.04
FAM3A-218ENST00000475657 SFTA2Q6UW10 78 aa8.54□□□□□ -1.04
FAM3A-218ENST00000475657 J3QQQ9 107 aa8.53□□□□□ -1.04
FAM3A-218ENST00000475657 VAMP8Q9BV40 100 aa8.53□□□□□ -1.04
FAM3A-218ENST00000475657 LGALS3P17931 250 aaKnown RBP8.52□□□□□ -1.05
FAM3A-218ENST00000475657 NMUP48645 174 aa8.52□□□□□ -1.05
FAM3A-218ENST00000475657 TSPEAR-AS2P59090 65 aa8.52□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms