RNA–Protein interactions for RNA: ENST00000475189.1

SRM-204, Transcript of spermidine synthase, humanhuman

TSL 2

Gene SRM, Length 545 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRM-204ENST00000475189 STPG4Q8N801 248 aa10.25□□□□□ -0.77
SRM-204ENST00000475189 C6orf48Q9UBA6 75 aa10.25□□□□□ -0.77
SRM-204ENST00000475189 PRSS2P07478 247 aa10.24□□□□□ -0.77
SRM-204ENST00000475189 Q8IZM0 81 aa10.24□□□□□ -0.77
SRM-204ENST00000475189 PACRGQ96M98 296 aaPredicted RBP10.24□□□□□ -0.77
SRM-204ENST00000475189 TOMM7Q9P0U1 55 aa10.24□□□□□ -0.77
SRM-204ENST00000475189 SMIM1B2RUZ4 78 aa10.23□□□□□ -0.77
SRM-204ENST00000475189 IGLC3P0DOY3 106 aa10.23□□□□□ -0.77
SRM-204ENST00000475189 RPL18AQ02543 176 aaKnown RBP10.23□□□□□ -0.77
SRM-204ENST00000475189 TRBV30A0A0K0K1B3 111 aa10.22□□□□□ -0.77
SRM-204ENST00000475189 HSBP1O75506 76 aa10.22□□□□□ -0.77
SRM-204ENST00000475189 LINC00310P59036 64 aa10.22□□□□□ -0.77
SRM-204ENST00000475189 C6orf226Q5I0X4 101 aa10.22□□□□□ -0.77
SRM-204ENST00000475189 FAM19A2Q8N3H0 131 aa10.22□□□□□ -0.77
SRM-204ENST00000475189 FLG2Q5D862 2391 aaPredicted RBP10.22□□□□□ -0.77
SRM-204ENST00000475189 SERF1AO75920 110 aa10.21□□□□□ -0.77
SRM-204ENST00000475189 TLX1NBP0CAT3 122 aa10.21□□□□□ -0.77
SRM-204ENST00000475189 RPL37AP61513 92 aaKnown RBP10.21□□□□□ -0.77
SRM-204ENST00000475189 SPINK8P0C7L1 97 aa10.2□□□□□ -0.78
SRM-204ENST00000475189 CKS1BP61024 79 aa10.2□□□□□ -0.78
SRM-204ENST00000475189 Q6ZRP5 223 aa10.2□□□□□ -0.78
SRM-204ENST00000475189 IFI27L1Q96BM0 104 aa10.2□□□□□ -0.78
SRM-204ENST00000475189 NUPR1O60356 82 aa10.19□□□□□ -0.78
SRM-204ENST00000475189 ZNF22P17026 224 aaPredicted RBP10.19□□□□□ -0.78
SRM-204ENST00000475189 C9orf116Q5BN46 136 aaPredicted RBP10.19□□□□□ -0.78
SRM-204ENST00000475189 COX7B2Q8TF08 81 aa10.19□□□□□ -0.78
SRM-204ENST00000475189 A0A1W2PNN7 141 aa10.18□□□□□ -0.78
SRM-204ENST00000475189 H3BRM9 83 aa10.18□□□□□ -0.78
SRM-204ENST00000475189 TRAV12-1A0A0B4J245 112 aa10.17□□□□□ -0.78
SRM-204ENST00000475189 C11orf86A6NJI1 115 aa10.17□□□□□ -0.78
SRM-204ENST00000475189 CXCL5P42830 114 aa10.17□□□□□ -0.78
SRM-204ENST00000475189 CHTOPQ9Y3Y2 248 aaKnown RBP10.17□□□□□ -0.78
SRM-204ENST00000475189 NDUFC2-KCTD14E9PQ53 114 aa10.16□□□□□ -0.78
SRM-204ENST00000475189 F8VRH5 84 aa10.16□□□□□ -0.78
SRM-204ENST00000475189 GAGE2EQ4V326 116 aa10.16□□□□□ -0.78
SRM-204ENST00000475189 C7orf33Q8WU49 177 aa10.16□□□□□ -0.78
SRM-204ENST00000475189 GAGE2DQ9UEU5 116 aa10.16□□□□□ -0.78
SRM-204ENST00000475189 PKHD1L1Q86WI1 4243 aa10.16□□□□□ -0.78
SRM-204ENST00000475189 IGLV5-39A0A0G2JS06 123 aa10.15□□□□□ -0.78
SRM-204ENST00000475189 MYCBP2O75592 4640 aa10.14□□□□□ -0.79
SRM-204ENST00000475189 HIST1H2BKO60814 126 aa10.14□□□□□ -0.79
SRM-204ENST00000475189 LEPROTL1O95214 131 aa10.14□□□□□ -0.79
SRM-204ENST00000475189 HIST1H2BJP06899 126 aa10.14□□□□□ -0.79
SRM-204ENST00000475189 HIST1H2BOP23527 126 aa10.14□□□□□ -0.79
SRM-204ENST00000475189 HIST1H2BBP33778 126 aa10.14□□□□□ -0.79
SRM-204ENST00000475189 HIST1H2BDP58876 126 aa10.14□□□□□ -0.79
SRM-204ENST00000475189 HIST1H2BCP62807 126 aa10.14□□□□□ -0.79
SRM-204ENST00000475189 HIST2H2BEQ16778 126 aa10.14□□□□□ -0.79
SRM-204ENST00000475189 HIST2H2BFQ5QNW6 126 aaPredicted RBP10.14□□□□□ -0.79
SRM-204ENST00000475189 HIST1H2BHQ93079 126 aa10.14□□□□□ -0.79
SRM-204ENST00000475189 HIST1H2BNQ99877 126 aa10.14□□□□□ -0.79
SRM-204ENST00000475189 HIST1H2BMQ99879 126 aa10.14□□□□□ -0.79
SRM-204ENST00000475189 TMEM170BQ5T4T1 132 aa10.13□□□□□ -0.79
SRM-204ENST00000475189 FAM168BA1KXE4 195 aa10.12□□□□□ -0.79
SRM-204ENST00000475189 HNRNPA3P51991 378 aaKnown RBP10.12□□□□□ -0.79
SRM-204ENST00000475189 FABP4P15090 132 aa10.11□□□□□ -0.79
SRM-204ENST00000475189 C9orf129Q5T035 196 aaKnown RBP10.11□□□□□ -0.79
SRM-204ENST00000475189 ODF1Q14990 250 aa10.1□□□□□ -0.79
SRM-204ENST00000475189 KRTAP7-1Q8IUC3 87 aa10.1□□□□□ -0.79
SRM-204ENST00000475189 HSPB8Q9UJY1 196 aa10.1□□□□□ -0.79
SRM-204ENST00000475189 H0Y8G0 127 aa10.09□□□□□ -0.79
SRM-204ENST00000475189 S100A1P23297 94 aa10.09□□□□□ -0.79
SRM-204ENST00000475189 PRR3P79522 188 aaKnown RBP10.09□□□□□ -0.79
SRM-204ENST00000475189 PHF5AQ7RTV0 110 aaKnown RBP10.09□□□□□ -0.79
SRM-204ENST00000475189 FAM19A5Q7Z5A7 132 aaPredicted RBP10.09□□□□□ -0.79
SRM-204ENST00000475189 TMEM223A0PJW6 202 aa10.08□□□□□ -0.8
SRM-204ENST00000475189 HERC1Q15751 4861 aa10.07□□□□□ -0.8
SRM-204ENST00000475189 ATP6V1G1O75348 118 aa10.07□□□□□ -0.8
SRM-204ENST00000475189 XAGE1AQ9HD64 81 aa10.07□□□□□ -0.8
SRM-204ENST00000475189 FAT3Q8TDW7 4589 aa10.06□□□□□ -0.8
SRM-204ENST00000475189 EIF4EBP3O60516 100 aaPredicted RBP10.06□□□□□ -0.8
SRM-204ENST00000475189 LRP1Q07954 4544 aaKnown RBP10.06□□□□□ -0.8
SRM-204ENST00000475189 DMBT1Q9UGM3 2413 aaPredicted RBP10.05□□□□□ -0.8
SRM-204ENST00000475189 GHRHP01286 108 aa10.05□□□□□ -0.8
SRM-204ENST00000475189 SERTAD4-AS1Q5TG53 156 aa10.04□□□□□ -0.8
SRM-204ENST00000475189 ZNF625Q96I27 306 aaPredicted RBP10.04□□□□□ -0.8
SRM-204ENST00000475189 KRTAP29-1A8MX34 341 aaPredicted RBP10.03□□□□□ -0.8
SRM-204ENST00000475189 M0QXV9 152 aa10.03□□□□□ -0.8
SRM-204ENST00000475189 COA6Q5JTJ3 125 aaKnown RBP10.03□□□□□ -0.8
SRM-204ENST00000475189 KRTAP11-1Q8IUC1 163 aa10.03□□□□□ -0.8
SRM-204ENST00000475189 PMCHL2Q9BQD1 86 aa10.03□□□□□ -0.8
SRM-204ENST00000475189 MAP1LC3CQ9BXW4 147 aa10.03□□□□□ -0.8
SRM-204ENST00000475189 PSORS1C2Q9UIG4 136 aa10.03□□□□□ -0.8
SRM-204ENST00000475189 PLNP26678 52 aa10.02□□□□□ -0.81
SRM-204ENST00000475189 PFN2P35080 140 aa10.02□□□□□ -0.81
SRM-204ENST00000475189 SFTA2Q6UW10 78 aa10.02□□□□□ -0.81
SRM-204ENST00000475189 ERG28Q9UKR5 140 aa10.02□□□□□ -0.81
SRM-204ENST00000475189 DPM2O94777 84 aa10.01□□□□□ -0.81
SRM-204ENST00000475189 COX17Q14061 63 aa10□□□□□ -0.81
SRM-204ENST00000475189 C22orf24Q9Y442 160 aa10□□□□□ -0.81
SRM-204ENST00000475189 J3QL48 77 aa9.99□□□□□ -0.81
SRM-204ENST00000475189 OXTP01178 125 aa9.99□□□□□ -0.81
SRM-204ENST00000475189 IGKCP01834 107 aa9.99□□□□□ -0.81
SRM-204ENST00000475189 PLA2G2DQ9UNK4 145 aa9.99□□□□□ -0.81
SRM-204ENST00000475189 SYS1-DBNDD2H3BUS1 97 aa9.98□□□□□ -0.81
SRM-204ENST00000475189 UBE2BP63146 152 aa9.98□□□□□ -0.81
SRM-204ENST00000475189 SRSF9Q13242 221 aaKnown RBP eCLIP9.98□□□□□ -0.81
SRM-204ENST00000475189 C1orf137Q5JT78 98 aa9.98□□□□□ -0.81
SRM-204ENST00000475189 SND1-IT1Q9HBX3 110 aa9.97□□□□□ -0.81
SRM-204ENST00000475189 TP73-AS1Q9UF72 201 aa9.97□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 61 ms