RNA–Protein interactions for RNA: ENST00000474962.1

CLIP2-204, Transcript of CAP-Gly domain containing linker protein 2, humanhuman

TSL 3

Gene CLIP2, Length 690 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP2-204ENST00000474962 S100A2P29034 98 aa7.66□□□□□ -1.18
CLIP2-204ENST00000474962 SPAG11BQ08648 103 aa7.66□□□□□ -1.18
CLIP2-204ENST00000474962 LINC01561Q8N1V8 128 aa7.66□□□□□ -1.18
CLIP2-204ENST00000474962 OR10D4PQ8NGN7 298 aa7.66□□□□□ -1.18
CLIP2-204ENST00000474962 CDKN2A-AS1Q9UH64 79 aa7.66□□□□□ -1.18
CLIP2-204ENST00000474962 LRP1Q07954 4544 aaKnown RBP7.66□□□□□ -1.18
CLIP2-204ENST00000474962 IGHV3-64A0A075B6Q5 118 aa7.65□□□□□ -1.18
CLIP2-204ENST00000474962 IGLC3P0DOY3 106 aa7.65□□□□□ -1.18
CLIP2-204ENST00000474962 CIRBP-AS1Q8TBR5 109 aa7.65□□□□□ -1.18
CLIP2-204ENST00000474962 CAMK2N2Q96S95 79 aa7.65□□□□□ -1.18
CLIP2-204ENST00000474962 TOMM7Q9P0U1 55 aa7.65□□□□□ -1.18
CLIP2-204ENST00000474962 IGLV4-69A0A075B6H9 119 aa7.64□□□□□ -1.19
CLIP2-204ENST00000474962 F8VRH5 84 aa7.64□□□□□ -1.19
CLIP2-204ENST00000474962 C6orf226Q5I0X4 101 aa7.64□□□□□ -1.19
CLIP2-204ENST00000474962 TMEM170BQ5T4T1 132 aa7.64□□□□□ -1.19
CLIP2-204ENST00000474962 LINC00526Q96FQ7 95 aa7.64□□□□□ -1.19
CLIP2-204ENST00000474962 MRPL35Q9NZE8 188 aaKnown RBP7.64□□□□□ -1.19
CLIP2-204ENST00000474962 IGLV5-45A0A087WSX0 123 aa7.63□□□□□ -1.19
CLIP2-204ENST00000474962 CKS1BP61024 79 aa7.63□□□□□ -1.19
CLIP2-204ENST00000474962 CNBPP62633 177 aaKnown RBP7.63□□□□□ -1.19
CLIP2-204ENST00000474962 SYCNQ0VAF6 134 aa7.63□□□□□ -1.19
CLIP2-204ENST00000474962 C2orf48Q96LS8 159 aa7.63□□□□□ -1.19
CLIP2-204ENST00000474962 C11orf86A6NJI1 115 aa7.62□□□□□ -1.19
CLIP2-204ENST00000474962 F8WDY8 70 aa7.62□□□□□ -1.19
CLIP2-204ENST00000474962 NDUFA1O15239 70 aa7.62□□□□□ -1.19
CLIP2-204ENST00000474962 SPINK8P0C7L1 97 aa7.62□□□□□ -1.19
CLIP2-204ENST00000474962 KRTAP10-4P60372 401 aaPredicted RBP7.62□□□□□ -1.19
CLIP2-204ENST00000474962 ODF1Q14990 250 aa7.62□□□□□ -1.19
CLIP2-204ENST00000474962 CARD19Q96LW7 228 aa7.62□□□□□ -1.19
CLIP2-204ENST00000474962 PKIGQ9Y2B9 76 aa7.62□□□□□ -1.19
CLIP2-204ENST00000474962 SYS1-DBNDD2H3BUS1 97 aa7.61□□□□□ -1.19
CLIP2-204ENST00000474962 DPM2O94777 84 aa7.61□□□□□ -1.19
CLIP2-204ENST00000474962 PLNP26678 52 aa7.61□□□□□ -1.19
CLIP2-204ENST00000474962 KRTDAPP60985 99 aa7.61□□□□□ -1.19
CLIP2-204ENST00000474962 C9orf163Q8N9P6 203 aa7.61□□□□□ -1.19
CLIP2-204ENST00000474962 FAT3Q8TDW7 4589 aa7.6□□□□□ -1.19
CLIP2-204ENST00000474962 KRTAP29-1A8MX34 341 aaPredicted RBP7.6□□□□□ -1.19
CLIP2-204ENST00000474962 SMIM1B2RUZ4 78 aa7.6□□□□□ -1.19
CLIP2-204ENST00000474962 ZNF22P17026 224 aaPredicted RBP7.6□□□□□ -1.19
CLIP2-204ENST00000474962 SNRPEP62304 92 aaKnown RBP7.6□□□□□ -1.19
CLIP2-204ENST00000474962 PET117Q6UWS5 81 aa7.6□□□□□ -1.19
CLIP2-204ENST00000474962 Q8IZM0 81 aa7.6□□□□□ -1.19
CLIP2-204ENST00000474962 COX7B2Q8TF08 81 aa7.6□□□□□ -1.19
CLIP2-204ENST00000474962 DPH3Q96FX2 82 aa7.6□□□□□ -1.19
CLIP2-204ENST00000474962 C20orf202A1L168 122 aa7.59□□□□□ -1.19
CLIP2-204ENST00000474962 IGKCP01834 107 aa7.59□□□□□ -1.19
CLIP2-204ENST00000474962 SLPIP03973 132 aa7.59□□□□□ -1.19
CLIP2-204ENST00000474962 CXCL5P42830 114 aa7.59□□□□□ -1.19
CLIP2-204ENST00000474962 HIST3H2BBQ8N257 126 aa7.59□□□□□ -1.19
CLIP2-204ENST00000474962 PMCHL2Q9BQD1 86 aa7.59□□□□□ -1.19
CLIP2-204ENST00000474962 PKHD1L1Q86WI1 4243 aa7.59□□□□□ -1.19
CLIP2-204ENST00000474962 PANO1I0J062 215 aa7.58□□□□□ -1.2
CLIP2-204ENST00000474962 C3orf79P0CE67 100 aa7.58□□□□□ -1.2
CLIP2-204ENST00000474962 HERVK_113P61574 105 aa7.58□□□□□ -1.2
CLIP2-204ENST00000474962 ANKRD39Q53RE8 183 aa7.58□□□□□ -1.2
CLIP2-204ENST00000474962 SDIM1Q6ZPB5 146 aa7.58□□□□□ -1.2
CLIP2-204ENST00000474962 Q6ZRU5 148 aa7.58□□□□□ -1.2
CLIP2-204ENST00000474962 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP7.58□□□□□ -1.2
CLIP2-204ENST00000474962 KIAA0087Q14695 138 aa7.57□□□□□ -1.2
CLIP2-204ENST00000474962 C2orf82Q6UX34 121 aa7.57□□□□□ -1.2
CLIP2-204ENST00000474962 UNQ6190/PRO20217Q6UXQ8 127 aa7.57□□□□□ -1.2
CLIP2-204ENST00000474962 TRBV30A0A0K0K1B3 111 aa7.56□□□□□ -1.2
CLIP2-204ENST00000474962 LOC107984640A0A0U1RRK4 108 aa7.56□□□□□ -1.2
CLIP2-204ENST00000474962 TMEM223A0PJW6 202 aa7.56□□□□□ -1.2
CLIP2-204ENST00000474962 AKR1D1P51857 326 aa7.56□□□□□ -1.2
CLIP2-204ENST00000474962 RNF151Q2KHN1 245 aa7.56□□□□□ -1.2
CLIP2-204ENST00000474962 LINC01545Q5VT33 79 aa7.56□□□□□ -1.2
CLIP2-204ENST00000474962 HIST1H2BLQ99880 126 aa7.56□□□□□ -1.2
CLIP2-204ENST00000474962 IGLV5-39A0A0G2JS06 123 aa7.55□□□□□ -1.2
CLIP2-204ENST00000474962 C5orf52A6NGY3 159 aa7.55□□□□□ -1.2
CLIP2-204ENST00000474962 TMA7Q9Y2S6 64 aaKnown RBP7.55□□□□□ -1.2
CLIP2-204ENST00000474962 HNRNPA3P51991 378 aaKnown RBP7.54□□□□□ -1.2
CLIP2-204ENST00000474962 RPL18AQ02543 176 aaKnown RBP7.54□□□□□ -1.2
CLIP2-204ENST00000474962 GAGE2BQ13066 116 aa7.54□□□□□ -1.2
CLIP2-204ENST00000474962 C10orf25Q5T742 122 aa7.54□□□□□ -1.2
CLIP2-204ENST00000474962 SFTA2Q6UW10 78 aa7.54□□□□□ -1.2
CLIP2-204ENST00000474962 LINC00474Q9P2X8 69 aa7.54□□□□□ -1.2
CLIP2-204ENST00000474962 IGKV2-24A0A0C4DH68 120 aa7.53□□□□□ -1.2
CLIP2-204ENST00000474962 RPL37AP61513 92 aaKnown RBP7.53□□□□□ -1.2
CLIP2-204ENST00000474962 PLEKHB2Q96CS7 222 aa7.53□□□□□ -1.2
CLIP2-204ENST00000474962 C6orf48Q9UBA6 75 aa7.53□□□□□ -1.2
CLIP2-204ENST00000474962 HMCN2Q8NDA2 5059 aa7.52□□□□□ -1.2
CLIP2-204ENST00000474962 LEPROTO15243 131 aa7.52□□□□□ -1.21
CLIP2-204ENST00000474962 MAJINQ3KP22 176 aa7.52□□□□□ -1.21
CLIP2-204ENST00000474962 OXTP01178 125 aa7.51□□□□□ -1.21
CLIP2-204ENST00000474962 CHTF8P0CG12 524 aa7.51□□□□□ -1.21
CLIP2-204ENST00000474962 LGALS3P17931 250 aaKnown RBP7.51□□□□□ -1.21
CLIP2-204ENST00000474962 GAGE2EQ4V326 116 aa7.51□□□□□ -1.21
CLIP2-204ENST00000474962 C9orf116Q5BN46 136 aaPredicted RBP7.51□□□□□ -1.21
CLIP2-204ENST00000474962 GAGE2DQ9UEU5 116 aa7.51□□□□□ -1.21
CLIP2-204ENST00000474962 A0A096LNI7 61 aa7.5□□□□□ -1.21
CLIP2-204ENST00000474962 MYMXA0A1B0GTQ4 84 aa7.5□□□□□ -1.21
CLIP2-204ENST00000474962 NDUFC2-KCTD14E9PQ53 114 aa7.5□□□□□ -1.21
CLIP2-204ENST00000474962 SCGB1D1O95968 90 aa7.5□□□□□ -1.21
CLIP2-204ENST00000474962 ZNF625Q96I27 306 aaPredicted RBP7.5□□□□□ -1.21
CLIP2-204ENST00000474962 NDUFA12Q9UI09 145 aa7.5□□□□□ -1.21
CLIP2-204ENST00000474962 A0A087WYN8 130 aa7.49□□□□□ -1.21
CLIP2-204ENST00000474962 HSBP1L1C9JCN9 74 aa7.49□□□□□ -1.21
CLIP2-204ENST00000474962 J3QQQ9 107 aa7.49□□□□□ -1.21
CLIP2-204ENST00000474962 TLX1NBP0CAT3 122 aa7.49□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms