RNA–Protein interactions for RNA: ENST00000474896.1

SRRT-209, Transcript of serrate, RNA effector molecule, humanhuman

TSL 3

Gene SRRT, Length 726 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRRT-209ENST00000474896 IFI27L1Q96BM0 104 aa9.73□□□□□ -0.85
SRRT-209ENST00000474896 CST9LQ9H4G1 147 aa9.73□□□□□ -0.85
SRRT-209ENST00000474896 REG3GQ6UW15 175 aa9.72□□□□□ -0.85
SRRT-209ENST00000474896 LINC00474Q9P2X8 69 aa9.72□□□□□ -0.85
SRRT-209ENST00000474896 RNF213Q63HN8 5207 aa9.72□□□□□ -0.85
SRRT-209ENST00000474896 FABP4P15090 132 aa9.71□□□□□ -0.86
SRRT-209ENST00000474896 FAM19A3Q7Z5A8 133 aa9.71□□□□□ -0.86
SRRT-209ENST00000474896 LINC00526Q96FQ7 95 aa9.71□□□□□ -0.86
SRRT-209ENST00000474896 HSPB8Q9UJY1 196 aa9.71□□□□□ -0.86
SRRT-209ENST00000474896 IGHV3OR16-9A0A0B4J2B5 98 aa9.7□□□□□ -0.86
SRRT-209ENST00000474896 SRSF9Q13242 221 aaKnown RBP eCLIP9.7□□□□□ -0.86
SRRT-209ENST00000474896 COX7A2LO14548 114 aa9.69□□□□□ -0.86
SRRT-209ENST00000474896 SEC11AP67812 179 aa9.69□□□□□ -0.86
SRRT-209ENST00000474896 C5orf38Q86SI9 138 aa9.69□□□□□ -0.86
SRRT-209ENST00000474896 PACRGQ96M98 296 aaPredicted RBP9.69□□□□□ -0.86
SRRT-209ENST00000474896 TRAV12-1A0A0B4J245 112 aa9.68□□□□□ -0.86
SRRT-209ENST00000474896 IGHV1-58A0A0C4DH39 117 aa9.68□□□□□ -0.86
SRRT-209ENST00000474896 S100A6P06703 90 aa9.68□□□□□ -0.86
SRRT-209ENST00000474896 HERVK_113P63121 156 aa9.68□□□□□ -0.86
SRRT-209ENST00000474896 Q6ZRP5 223 aa9.68□□□□□ -0.86
SRRT-209ENST00000474896 CARD19Q96LW7 228 aa9.68□□□□□ -0.86
SRRT-209ENST00000474896 GEMIN7Q9H840 131 aaKnown RBP9.68□□□□□ -0.86
SRRT-209ENST00000474896 PKIGQ9Y2B9 76 aa9.68□□□□□ -0.86
SRRT-209ENST00000474896 TINCRA0A1B0GVN0 87 aa9.67□□□□□ -0.86
SRRT-209ENST00000474896 IGLV4-69A0A075B6H9 119 aa9.66□□□□□ -0.86
SRRT-209ENST00000474896 H0Y8G0 127 aa9.66□□□□□ -0.86
SRRT-209ENST00000474896 IGLC3P0DOY3 106 aa9.66□□□□□ -0.86
SRRT-209ENST00000474896 MALP21145 153 aa9.66□□□□□ -0.86
SRRT-209ENST00000474896 HIST3H2BBQ8N257 126 aa9.66□□□□□ -0.86
SRRT-209ENST00000474896 MAP1LC3CQ9BXW4 147 aa9.66□□□□□ -0.86
SRRT-209ENST00000474896 CHTOPQ9Y3Y2 248 aaKnown RBP9.66□□□□□ -0.86
SRRT-209ENST00000474896 A0A087WZ39 114 aa9.65□□□□□ -0.86
SRRT-209ENST00000474896 ZNF561-AS1K7EIQ3 104 aa9.65□□□□□ -0.86
SRRT-209ENST00000474896 SYCNQ0VAF6 134 aa9.65□□□□□ -0.86
SRRT-209ENST00000474896 CDKN2A-AS1Q9UH64 79 aa9.65□□□□□ -0.86
SRRT-209ENST00000474896 IGLV5-45A0A087WSX0 123 aa9.64□□□□□ -0.87
SRRT-209ENST00000474896 F8VRH5 84 aa9.64□□□□□ -0.87
SRRT-209ENST00000474896 APOMO95445 188 aa9.64□□□□□ -0.87
SRRT-209ENST00000474896 SNRPEP62304 92 aaKnown RBP9.64□□□□□ -0.87
SRRT-209ENST00000474896 LINC00469Q8N7U9 141 aa9.64□□□□□ -0.87
SRRT-209ENST00000474896 MRPL35Q9NZE8 188 aaKnown RBP9.64□□□□□ -0.87
SRRT-209ENST00000474896 C11orf86A6NJI1 115 aa9.63□□□□□ -0.87
SRRT-209ENST00000474896 S100A2P29034 98 aa9.63□□□□□ -0.87
SRRT-209ENST00000474896 PTTG1IPP53801 180 aa9.63□□□□□ -0.87
SRRT-209ENST00000474896 GAGE2BQ13066 116 aa9.63□□□□□ -0.87
SRRT-209ENST00000474896 LINC01561Q8N1V8 128 aa9.63□□□□□ -0.87
SRRT-209ENST00000474896 C5orf52A6NGY3 159 aa9.62□□□□□ -0.87
SRRT-209ENST00000474896 SYS1-DBNDD2H3BUS1 97 aa9.62□□□□□ -0.87
SRRT-209ENST00000474896 HIST1H2BLQ99880 126 aa9.62□□□□□ -0.87
SRRT-209ENST00000474896 LOC107984640A0A0U1RRK4 108 aa9.61□□□□□ -0.87
SRRT-209ENST00000474896 A0A1W2PNN7 141 aa9.61□□□□□ -0.87
SRRT-209ENST00000474896 C3orf79P0CE67 100 aa9.61□□□□□ -0.87
SRRT-209ENST00000474896 ZNF22P17026 224 aaPredicted RBP9.61□□□□□ -0.87
SRRT-209ENST00000474896 OR10D4PQ8NGN7 298 aa9.61□□□□□ -0.87
SRRT-209ENST00000474896 ORAOV1Q8WV07 137 aa9.61□□□□□ -0.87
SRRT-209ENST00000474896 KRTDAPP60985 99 aa9.6□□□□□ -0.87
SRRT-209ENST00000474896 SPAG11BQ08648 103 aa9.6□□□□□ -0.87
SRRT-209ENST00000474896 TMA7Q9Y2S6 64 aaKnown RBP9.6□□□□□ -0.87
SRRT-209ENST00000474896 SMIM1B2RUZ4 78 aa9.59□□□□□ -0.87
SRRT-209ENST00000474896 H3BRM9 83 aa9.59□□□□□ -0.87
SRRT-209ENST00000474896 TMEM170BQ5T4T1 132 aa9.59□□□□□ -0.87
SRRT-209ENST00000474896 PET117Q6UWS5 81 aa9.59□□□□□ -0.87
SRRT-209ENST00000474896 PMCHL2Q9BQD1 86 aa9.59□□□□□ -0.87
SRRT-209ENST00000474896 DPM2O94777 84 aa9.58□□□□□ -0.88
SRRT-209ENST00000474896 SPINK8P0C7L1 97 aa9.58□□□□□ -0.88
SRRT-209ENST00000474896 PSORS1C2Q9UIG4 136 aa9.58□□□□□ -0.88
SRRT-209ENST00000474896 PLNP26678 52 aa9.57□□□□□ -0.88
SRRT-209ENST00000474896 LINC01545Q5VT33 79 aa9.57□□□□□ -0.88
SRRT-209ENST00000474896 IGKCP01834 107 aa9.56□□□□□ -0.88
SRRT-209ENST00000474896 KIAA0087Q14695 138 aa9.56□□□□□ -0.88
SRRT-209ENST00000474896 C9orf116Q5BN46 136 aaPredicted RBP9.56□□□□□ -0.88
SRRT-209ENST00000474896 C2orf48Q96LS8 159 aa9.56□□□□□ -0.88
SRRT-209ENST00000474896 CAMK2N2Q96S95 79 aa9.56□□□□□ -0.88
SRRT-209ENST00000474896 TOMM7Q9P0U1 55 aa9.56□□□□□ -0.88
SRRT-209ENST00000474896 PRSS2P07478 247 aa9.55□□□□□ -0.88
SRRT-209ENST00000474896 C1orf137Q5JT78 98 aa9.55□□□□□ -0.88
SRRT-209ENST00000474896 Q8IZM0 81 aa9.55□□□□□ -0.88
SRRT-209ENST00000474896 IGLV5-39A0A0G2JS06 123 aa9.54□□□□□ -0.88
SRRT-209ENST00000474896 TMEM223A0PJW6 202 aa9.54□□□□□ -0.88
SRRT-209ENST00000474896 RPL18AQ02543 176 aaKnown RBP9.54□□□□□ -0.88
SRRT-209ENST00000474896 PHF5AQ7RTV0 110 aaKnown RBP9.54□□□□□ -0.88
SRRT-209ENST00000474896 COX7B2Q8TF08 81 aa9.54□□□□□ -0.88
SRRT-209ENST00000474896 C20orf202A1L168 122 aa9.53□□□□□ -0.88
SRRT-209ENST00000474896 F8WDY8 70 aa9.53□□□□□ -0.88
SRRT-209ENST00000474896 C6orf226Q5I0X4 101 aa9.53□□□□□ -0.88
SRRT-209ENST00000474896 LPAP08519 4548 aa9.52□□□□□ -0.89
SRRT-209ENST00000474896 NDUFA1O15239 70 aa9.51□□□□□ -0.89
SRRT-209ENST00000474896 CKS1BP61024 79 aa9.51□□□□□ -0.89
SRRT-209ENST00000474896 C10orf25Q5T742 122 aa9.51□□□□□ -0.89
SRRT-209ENST00000474896 C2orf82Q6UX34 121 aa9.51□□□□□ -0.89
SRRT-209ENST00000474896 PRR26Q8N8Z3 221 aa9.51□□□□□ -0.89
SRRT-209ENST00000474896 CXCL5P42830 114 aa9.5□□□□□ -0.89
SRRT-209ENST00000474896 UNQ6190/PRO20217Q6UXQ8 127 aa9.5□□□□□ -0.89
SRRT-209ENST00000474896 IGLV7-43P04211 117 aa9.49□□□□□ -0.89
SRRT-209ENST00000474896 HERVK_113P61574 105 aa9.49□□□□□ -0.89
SRRT-209ENST00000474896 RNF151Q2KHN1 245 aa9.49□□□□□ -0.89
SRRT-209ENST00000474896 DIRC1Q969H9 104 aa9.49□□□□□ -0.89
SRRT-209ENST00000474896 C6orf48Q9UBA6 75 aa9.48□□□□□ -0.89
SRRT-209ENST00000474896 TRBV30A0A0K0K1B3 111 aa9.47□□□□□ -0.89
SRRT-209ENST00000474896 AKR1D1P51857 326 aa9.47□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 45.5 ms