RNA–Protein interactions for RNA: ENST00000474835.5

USP16-205, Transcript of ubiquitin specific peptidase 16, humanhuman

TSL 1 (best)

Gene USP16, Length 3,835 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP16-205ENST00000474835 C11orf68Q9H3H3 251 aaKnown RBP2.75□□□□□ -1.97
USP16-205ENST00000474835 Q9HAA7 133 aa2.75□□□□□ -1.97
USP16-205ENST00000474835 MOB4Q9Y3A3 225 aa2.75□□□□□ -1.97
USP16-205ENST00000474835 C2CD3Q4AC94 2353 aa2.75□□□□□ -1.97
USP16-205ENST00000474835 H3BQ85 93 aa2.74□□□□□ -1.97
USP16-205ENST00000474835 NCR3O14931 201 aa2.74□□□□□ -1.97
USP16-205ENST00000474835 SCGB2A1O75556 95 aa2.74□□□□□ -1.97
USP16-205ENST00000474835 BLCAPP62952 87 aa2.74□□□□□ -1.97
USP16-205ENST00000474835 C4orf48Q5BLP8 95 aa2.74□□□□□ -1.97
USP16-205ENST00000474835 KRTAP26-1Q6PEX3 210 aa2.74□□□□□ -1.97
USP16-205ENST00000474835 PHF5AQ7RTV0 110 aaKnown RBP2.74□□□□□ -1.97
USP16-205ENST00000474835 C16orf92Q96LL3 132 aa2.74□□□□□ -1.97
USP16-205ENST00000474835 EP300Q09472 2414 aaPredicted RBP2.74□□□□□ -1.97
USP16-205ENST00000474835 A0A1B0GUV1 79 aa2.74□□□□□ -1.97
USP16-205ENST00000474835 PDE6GP18545 87 aa2.74□□□□□ -1.97
USP16-205ENST00000474835 ESRGQ1W209 222 aa2.74□□□□□ -1.97
USP16-205ENST00000474835 Q8IZM0 81 aa2.74□□□□□ -1.97
USP16-205ENST00000474835 C11orf44Q8N8P7 122 aa2.74□□□□□ -1.97
USP16-205ENST00000474835 C19orf73Q9NVV2 129 aa2.74□□□□□ -1.97
USP16-205ENST00000474835 ATRXP46100 2492 aa2.74□□□□□ -1.97
USP16-205ENST00000474835 IGLV5-48A0A075B6I7 105 aa2.74□□□□□ -1.97
USP16-205ENST00000474835 S100A7L2Q5SY68 101 aa2.74□□□□□ -1.97
USP16-205ENST00000474835 CD164L2Q6UWJ8 174 aa2.74□□□□□ -1.97
USP16-205ENST00000474835 ORMDL1Q9P0S3 153 aa2.74□□□□□ -1.97
USP16-205ENST00000474835 TRIOBPQ9H2D6 2365 aa2.73□□□□□ -1.97
USP16-205ENST00000474835 A0A0J9YWU9 116 aa2.73□□□□□ -1.97
USP16-205ENST00000474835 LOC101927531A0A1B0GV80 90 aa2.73□□□□□ -1.97
USP16-205ENST00000474835 IGHV3-11P01762 117 aa2.73□□□□□ -1.97
USP16-205ENST00000474835 MGPP08493 103 aa2.73□□□□□ -1.97
USP16-205ENST00000474835 RHPN1-AS1Q9BWJ2 59 aa2.73□□□□□ -1.97
USP16-205ENST00000474835 ZNF561-AS1K7EIQ3 104 aa2.73□□□□□ -1.97
USP16-205ENST00000474835 TMEM256-PLSCR3K7ERE1 68 aa2.73□□□□□ -1.97
USP16-205ENST00000474835 SAA4P35542 130 aa2.73□□□□□ -1.97
USP16-205ENST00000474835 FLNCQ14315 2725 aa2.73□□□□□ -1.97
USP16-205ENST00000474835 IGHV3-66A0A0C4DH42 116 aa2.73□□□□□ -1.97
USP16-205ENST00000474835 Q6ZTI0 123 aa2.73□□□□□ -1.97
USP16-205ENST00000474835 RMI2Q96E14 147 aa2.73□□□□□ -1.97
USP16-205ENST00000474835 LINC00588Q9Y4M8 146 aa2.73□□□□□ -1.97
USP16-205ENST00000474835 PKD1L1Q8TDX9 2849 aa2.73□□□□□ -1.97
USP16-205ENST00000474835 M0R378 163 aa2.72□□□□□ -1.97
USP16-205ENST00000474835 COX7B2Q8TF08 81 aa2.72□□□□□ -1.97
USP16-205ENST00000474835 UBR5O95071 2799 aaPredicted RBP2.72□□□□□ -1.97
USP16-205ENST00000474835 IGHV3-64A0A075B6Q5 118 aa2.72□□□□□ -1.97
USP16-205ENST00000474835 IGHV3OR16-13A0A075B7E8 117 aa2.72□□□□□ -1.97
USP16-205ENST00000474835 IGHV3-74A0A0B4J1X5 117 aa2.72□□□□□ -1.97
USP16-205ENST00000474835 IGKV3D-7A0A0C4DH55 119 aa2.72□□□□□ -1.97
USP16-205ENST00000474835 LYNX1G3V0Z9 82 aa2.72□□□□□ -1.97
USP16-205ENST00000474835 IGKV3-20P01619 116 aa2.72□□□□□ -1.97
USP16-205ENST00000474835 LYNX1P0DP58 116 aa2.72□□□□□ -1.97
USP16-205ENST00000474835 PKHD1L1Q86WI1 4243 aa2.72□□□□□ -1.97
USP16-205ENST00000474835 SPRR4Q96PI1 79 aa2.72□□□□□ -1.97
USP16-205ENST00000474835 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP2.72□□□□□ -1.971e-8■■■■■ 27.2
USP16-205ENST00000474835 KRTAP29-1A8MX34 341 aaPredicted RBP2.72□□□□□ -1.97
USP16-205ENST00000474835 H7C2G1 150 aa2.72□□□□□ -1.97
USP16-205ENST00000474835 BBC3Q96PG8 261 aaPredicted RBP2.72□□□□□ -1.97
USP16-205ENST00000474835 TMEM243Q9BU79 118 aa2.72□□□□□ -1.97
USP16-205ENST00000474835 TLN1Q9Y490 2541 aaKnown RBP2.72□□□□□ -1.97
USP16-205ENST00000474835 TRAV12-3A0A0B4J271 114 aa2.71□□□□□ -1.98
USP16-205ENST00000474835 COX7A1P24310 79 aa2.71□□□□□ -1.98
USP16-205ENST00000474835 Q5VV11 94 aa2.71□□□□□ -1.98
USP16-205ENST00000474835 ENHOQ6UWT2 76 aa2.71□□□□□ -1.98
USP16-205ENST00000474835 C9orf163Q8N9P6 203 aa2.71□□□□□ -1.98
USP16-205ENST00000474835 Q9BRP9 147 aa2.71□□□□□ -1.98
USP16-205ENST00000474835 VWFP04275 2813 aa2.71□□□□□ -1.98
USP16-205ENST00000474835 NBL1P41271 181 aa2.71□□□□□ -1.98
USP16-205ENST00000474835 SND1-IT1Q9HBX3 110 aa2.71□□□□□ -1.98
USP16-205ENST00000474835 BEX4Q9NWD9 120 aaPredicted RBP2.71□□□□□ -1.98
USP16-205ENST00000474835 KMT2AQ03164 3969 aa2.71□□□□□ -1.98
USP16-205ENST00000474835 F8WEM9 126 aa2.71□□□□□ -1.98
USP16-205ENST00000474835 ELOF1P60002 83 aaKnown RBP2.71□□□□□ -1.98
USP16-205ENST00000474835 CD164Q04900 197 aa2.71□□□□□ -1.98
USP16-205ENST00000474835 RIF1Q5UIP0 2472 aaKnown RBP2.7□□□□□ -1.98
USP16-205ENST00000474835 CNBPP62633 177 aaKnown RBP2.7□□□□□ -1.98
USP16-205ENST00000474835 ZNF843Q8N446 348 aa2.7□□□□□ -1.98
USP16-205ENST00000474835 TMEM254Q8TBM7 123 aa2.7□□□□□ -1.98
USP16-205ENST00000474835 RPL36ALQ969Q0 106 aaKnown RBP2.7□□□□□ -1.98
USP16-205ENST00000474835 JMJD1CQ15652 2540 aa2.7□□□□□ -1.98
USP16-205ENST00000474835 DNAH2Q9P225 4427 aa2.7□□□□□ -1.98
USP16-205ENST00000474835 SETD2Q9BYW2 2564 aaPredicted RBP2.7□□□□□ -1.98
USP16-205ENST00000474835 IGHV3-49A0A0A0MS15 119 aa2.7□□□□□ -1.98
USP16-205ENST00000474835 KNCNA6PVL3 124 aa2.7□□□□□ -1.98
USP16-205ENST00000474835 SONP18583 2426 aaKnown RBP2.7□□□□□ -1.98
USP16-205ENST00000474835 LECT2O14960 151 aa2.7□□□□□ -1.98
USP16-205ENST00000474835 WFDC9Q8NEX5 89 aa2.7□□□□□ -1.98
USP16-205ENST00000474835 UBTD1Q9HAC8 227 aa2.7□□□□□ -1.98
USP16-205ENST00000474835 LAMTOR3Q9UHA4 124 aa2.7□□□□□ -1.98
USP16-205ENST00000474835 NOTCH3Q9UM47 2321 aa2.69□□□□□ -1.98
USP16-205ENST00000474835 SPRR1AP35321 89 aa2.69□□□□□ -1.98
USP16-205ENST00000474835 CIRBPQ14011 172 aaKnown RBP2.69□□□□□ -1.98
USP16-205ENST00000474835 RNASE13Q5GAN3 156 aaKnown RBP2.69□□□□□ -1.98
USP16-205ENST00000474835 LINC00528Q8N1L1 170 aa2.69□□□□□ -1.98
USP16-205ENST00000474835 C20orf197Q8N268 126 aa2.69□□□□□ -1.98
USP16-205ENST00000474835 SPANXA2-OT1Q8N9U9 137 aa2.69□□□□□ -1.98
USP16-205ENST00000474835 IGLV4-60A0A075B6I1 120 aa2.69□□□□□ -1.98
USP16-205ENST00000474835 PSCAO43653 123 aa2.69□□□□□ -1.98
USP16-205ENST00000474835 PRM2P04554 102 aa2.69□□□□□ -1.98
USP16-205ENST00000474835 KCNQ1DNQ9H478 68 aa2.69□□□□□ -1.98
USP16-205ENST00000474835 PRR34Q9NV39 138 aa2.69□□□□□ -1.98
USP16-205ENST00000474835 IGLV8-61A0A075B6I0 122 aa2.69□□□□□ -1.98
USP16-205ENST00000474835 C1orf195Q5TG92 126 aa2.69□□□□□ -1.98
Retrieved 100 of 20,778 RNA–protein pairs in 12.2 ms