RNA–Protein interactions for RNA: ENST00000474648.5

COL8A1-206, Transcript of collagen type VIII alpha 1 chain, humanhuman

TSL 5

Gene COL8A1, Length 841 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL8A1-206ENST00000474648 ORAOV1Q8WV07 137 aa6.54□□□□□ -1.36
COL8A1-206ENST00000474648 LINC00526Q96FQ7 95 aa6.54□□□□□ -1.36
COL8A1-206ENST00000474648 LINC00336Q6ZUF6 198 aa6.53□□□□□ -1.36
COL8A1-206ENST00000474648 NTN5Q8WTR8 489 aaPredicted RBP6.53□□□□□ -1.36
COL8A1-206ENST00000474648 hDV102S1A0JD36 115 aa6.52□□□□□ -1.37
COL8A1-206ENST00000474648 AKR1D1P51857 326 aa6.52□□□□□ -1.37
COL8A1-206ENST00000474648 SPAG11BQ08648 103 aa6.52□□□□□ -1.37
COL8A1-206ENST00000474648 MAJINQ3KP22 176 aa6.52□□□□□ -1.37
COL8A1-206ENST00000474648 C14orf177Q52M58 125 aa6.52□□□□□ -1.37
COL8A1-206ENST00000474648 PYY3Q5JQD4 70 aa6.52□□□□□ -1.37
COL8A1-206ENST00000474648 COX7B2Q8TF08 81 aa6.52□□□□□ -1.37
COL8A1-206ENST00000474648 DYNC1H1Q14204 4646 aaKnown RBP6.52□□□□□ -1.37
COL8A1-206ENST00000474648 A0A1B0GVY2 172 aa6.51□□□□□ -1.37
COL8A1-206ENST00000474648 ZNF561-AS1K7EIQ3 104 aa6.51□□□□□ -1.37
COL8A1-206ENST00000474648 LEPROTO15243 131 aa6.51□□□□□ -1.37
COL8A1-206ENST00000474648 ANKRD39Q53RE8 183 aa6.51□□□□□ -1.37
COL8A1-206ENST00000474648 C10orf25Q5T742 122 aa6.51□□□□□ -1.37
COL8A1-206ENST00000474648 Q8IZM0 81 aa6.51□□□□□ -1.37
COL8A1-206ENST00000474648 C2orf48Q96LS8 159 aa6.51□□□□□ -1.37
COL8A1-206ENST00000474648 TOMM7Q9P0U1 55 aa6.51□□□□□ -1.37
COL8A1-206ENST00000474648 DNAH8Q96JB1 4490 aa6.51□□□□□ -1.37
COL8A1-206ENST00000474648 IGKV2D-26A0A0A0MRZ7 120 aa6.5□□□□□ -1.37
COL8A1-206ENST00000474648 E9PLD3 99 aa6.5□□□□□ -1.37
COL8A1-206ENST00000474648 FUSP35637 526 aaKnown RBP eCLIP6.5□□□□□ -1.37
COL8A1-206ENST00000474648 TSPEAR-AS2P59090 65 aa6.5□□□□□ -1.37
COL8A1-206ENST00000474648 KRTAP10-2P60368 255 aa6.5□□□□□ -1.37
COL8A1-206ENST00000474648 HERVK_113P61574 105 aa6.5□□□□□ -1.37
COL8A1-206ENST00000474648 CNBPP62633 177 aaKnown RBP6.5□□□□□ -1.37
COL8A1-206ENST00000474648 C6orf226Q5I0X4 101 aa6.5□□□□□ -1.37
COL8A1-206ENST00000474648 LCE3BQ5TA77 95 aa6.5□□□□□ -1.37
COL8A1-206ENST00000474648 C2orf82Q6UX34 121 aa6.5□□□□□ -1.37
COL8A1-206ENST00000474648 UNQ6190/PRO20217Q6UXQ8 127 aa6.5□□□□□ -1.37
COL8A1-206ENST00000474648 IGLV2-33A0A075B6J2 118 aaPredicted RBP6.49□□□□□ -1.37
COL8A1-206ENST00000474648 F8WDY8 70 aa6.49□□□□□ -1.37
COL8A1-206ENST00000474648 PRSS2P07478 247 aa6.49□□□□□ -1.37
COL8A1-206ENST00000474648 Q6ZRU5 148 aa6.49□□□□□ -1.37
COL8A1-206ENST00000474648 PLEKHB2Q96CS7 222 aa6.49□□□□□ -1.37
COL8A1-206ENST00000474648 J3QQQ9 107 aa6.48□□□□□ -1.37
COL8A1-206ENST00000474648 SYCNQ0VAF6 134 aa6.48□□□□□ -1.37
COL8A1-206ENST00000474648 ZNF625Q96I27 306 aaPredicted RBP6.48□□□□□ -1.37
COL8A1-206ENST00000474648 CAMK2N2Q96S95 79 aa6.48□□□□□ -1.37
COL8A1-206ENST00000474648 NDUFA1O15239 70 aa6.47□□□□□ -1.37
COL8A1-206ENST00000474648 C6orf48Q9UBA6 75 aa6.47□□□□□ -1.37
COL8A1-206ENST00000474648 LRP1BQ9NZR2 4599 aa6.47□□□□□ -1.37
COL8A1-206ENST00000474648 EPPK1P58107 5090 aaKnown RBP6.46□□□□□ -1.38
COL8A1-206ENST00000474648 CXCL5P42830 114 aa6.46□□□□□ -1.38
COL8A1-206ENST00000474648 CKS1BP61024 79 aa6.46□□□□□ -1.38
COL8A1-206ENST00000474648 RNF151Q2KHN1 245 aa6.46□□□□□ -1.38
COL8A1-206ENST00000474648 C9orf163Q8N9P6 203 aa6.46□□□□□ -1.38
COL8A1-206ENST00000474648 CARD19Q96LW7 228 aa6.46□□□□□ -1.38
COL8A1-206ENST00000474648 TTTY13Q9BZ97 58 aa6.46□□□□□ -1.38
COL8A1-206ENST00000474648 NDUFA12Q9UI09 145 aa6.46□□□□□ -1.38
COL8A1-206ENST00000474648 IGLV5-52A0A0A0MRZ9 124 aa6.45□□□□□ -1.38
COL8A1-206ENST00000474648 HSBP1L1C9JCN9 74 aa6.45□□□□□ -1.38
COL8A1-206ENST00000474648 LGALS3P17931 250 aaKnown RBP6.45□□□□□ -1.38
COL8A1-206ENST00000474648 LINC01620Q4KN68 170 aa6.45□□□□□ -1.38
COL8A1-206ENST00000474648 C9orf116Q5BN46 136 aaPredicted RBP6.45□□□□□ -1.38
COL8A1-206ENST00000474648 PCP2Q8IVA1 136 aa6.45□□□□□ -1.38
COL8A1-206ENST00000474648 TRAV16A0A0A6YYK6 109 aaPredicted RBP6.44□□□□□ -1.38
COL8A1-206ENST00000474648 TRBV30A0A0K0K1B3 111 aa6.44□□□□□ -1.38
COL8A1-206ENST00000474648 MYMXA0A1B0GTQ4 84 aa6.44□□□□□ -1.38
COL8A1-206ENST00000474648 NMUP48645 174 aa6.44□□□□□ -1.38
COL8A1-206ENST00000474648 SDIM1Q6ZPB5 146 aa6.44□□□□□ -1.38
COL8A1-206ENST00000474648 PKHD1P08F94 4074 aa6.43□□□□□ -1.38
COL8A1-206ENST00000474648 SPATA45Q537H7 98 aa6.43□□□□□ -1.38
COL8A1-206ENST00000474648 VAMP8Q9BV40 100 aa6.43□□□□□ -1.38
COL8A1-206ENST00000474648 PAM16Q9Y3D7 125 aa6.43□□□□□ -1.38
COL8A1-206ENST00000474648 ZNF815PA8K554 130 aa6.42□□□□□ -1.38
COL8A1-206ENST00000474648 TLX1NBP0CAT3 122 aa6.42□□□□□ -1.38
COL8A1-206ENST00000474648 HERV-K104P63124 156 aa6.42□□□□□ -1.38
COL8A1-206ENST00000474648 SFTA2Q6UW10 78 aa6.42□□□□□ -1.38
COL8A1-206ENST00000474648 ERG28Q9UKR5 140 aa6.42□□□□□ -1.38
COL8A1-206ENST00000474648 A0A0J9YXY3 114 aa6.41□□□□□ -1.38
COL8A1-206ENST00000474648 SMIM6P0DI80 62 aa6.41□□□□□ -1.38
COL8A1-206ENST00000474648 COX8AP10176 69 aa6.41□□□□□ -1.38
COL8A1-206ENST00000474648 GCSHP23434 173 aa6.41□□□□□ -1.38
COL8A1-206ENST00000474648 KRTAP10-1P60331 282 aa6.41□□□□□ -1.38
COL8A1-206ENST00000474648 Q6ZRP5 223 aa6.41□□□□□ -1.38
COL8A1-206ENST00000474648 BOD1L2Q8IYS8 172 aa6.41□□□□□ -1.38
COL8A1-206ENST00000474648 LOC107984640A0A0U1RRK4 108 aa6.4□□□□□ -1.38
COL8A1-206ENST00000474648 SMIM13P0DJ93 91 aa6.4□□□□□ -1.38
COL8A1-206ENST00000474648 ADAMTSL4-AS1Q5T5F5 129 aa6.4□□□□□ -1.38
COL8A1-206ENST00000474648 C14orf144Q96I85 54 aa6.4□□□□□ -1.38
COL8A1-206ENST00000474648 LITAFQ99732 161 aa6.4□□□□□ -1.38
COL8A1-206ENST00000474648 A0A0U1RRA0 63 aa6.39□□□□□ -1.39
COL8A1-206ENST00000474648 NDUFC2-KCTD14E9PQ53 114 aa6.39□□□□□ -1.39
COL8A1-206ENST00000474648 PANO1I0J062 215 aa6.39□□□□□ -1.39
COL8A1-206ENST00000474648 DLEU1O43261 78 aa6.39□□□□□ -1.39
COL8A1-206ENST00000474648 PFN2P35080 140 aa6.39□□□□□ -1.39
COL8A1-206ENST00000474648 COX17Q14061 63 aa6.39□□□□□ -1.39
COL8A1-206ENST00000474648 TP73-AS1Q9UF72 201 aa6.39□□□□□ -1.39
COL8A1-206ENST00000474648 A0A096LNI7 61 aa6.38□□□□□ -1.39
COL8A1-206ENST00000474648 C16orf90A8MZG2 172 aa6.38□□□□□ -1.39
COL8A1-206ENST00000474648 LINC00587B1AMM8 73 aa6.38□□□□□ -1.39
COL8A1-206ENST00000474648 TIMM17BO60830 172 aa6.38□□□□□ -1.39
COL8A1-206ENST00000474648 CHTF8P0CG12 524 aa6.38□□□□□ -1.39
COL8A1-206ENST00000474648 PTTG1IPP53801 180 aa6.38□□□□□ -1.39
COL8A1-206ENST00000474648 LINC00158P58513 81 aa6.38□□□□□ -1.39
COL8A1-206ENST00000474648 S100A12P80511 92 aa6.38□□□□□ -1.39
COL8A1-206ENST00000474648 GAGE2BQ13066 116 aa6.38□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 57.4 ms