RNA–Protein interactions for RNA: ENST00000474521.1

FGFR3-207, Transcript of fibroblast growth factor receptor 3, humanhuman

TSL 2

Gene FGFR3, Length 545 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FGFR3-207ENST00000474521 BAGE3Q86Y29 109 aa11.14□□□□□ -0.63
FGFR3-207ENST00000474521 TOMM7Q9P0U1 55 aa11.14□□□□□ -0.63
FGFR3-207ENST00000474521 IGLC3P0DOY3 106 aa11.13□□□□□ -0.63
FGFR3-207ENST00000474521 CKS1BP61024 79 aa11.13□□□□□ -0.63
FGFR3-207ENST00000474521 RPL18AQ02543 176 aaKnown RBP11.13□□□□□ -0.63
FGFR3-207ENST00000474521 C7orf33Q8WU49 177 aa11.13□□□□□ -0.63
FGFR3-207ENST00000474521 SMIM1B2RUZ4 78 aa11.12□□□□□ -0.63
FGFR3-207ENST00000474521 H3BRM9 83 aa11.12□□□□□ -0.63
FGFR3-207ENST00000474521 HSBP1O75506 76 aa11.12□□□□□ -0.63
FGFR3-207ENST00000474521 C2orf82Q6UX34 121 aa11.12□□□□□ -0.63
FGFR3-207ENST00000474521 CXCL5P42830 114 aa11.11□□□□□ -0.63
FGFR3-207ENST00000474521 Q6ZRP5 223 aa11.1□□□□□ -0.63
FGFR3-207ENST00000474521 NDUFC2-KCTD14E9PQ53 114 aa11.08□□□□□ -0.64
FGFR3-207ENST00000474521 F8VRH5 84 aa11.08□□□□□ -0.64
FGFR3-207ENST00000474521 COX7B2Q8TF08 81 aa11.08□□□□□ -0.64
FGFR3-207ENST00000474521 IFI27L1Q96BM0 104 aa11.08□□□□□ -0.64
FGFR3-207ENST00000474521 TRAV12-1A0A0B4J245 112 aa11.07□□□□□ -0.64
FGFR3-207ENST00000474521 SPINK8P0C7L1 97 aa11.07□□□□□ -0.64
FGFR3-207ENST00000474521 C9orf116Q5BN46 136 aaPredicted RBP11.07□□□□□ -0.64
FGFR3-207ENST00000474521 FAM19A2Q8N3H0 131 aa11.07□□□□□ -0.64
FGFR3-207ENST00000474521 A0A1W2PNN7 141 aa11.06□□□□□ -0.64
FGFR3-207ENST00000474521 SCO1O75880 301 aa11.06□□□□□ -0.64
FGFR3-207ENST00000474521 SERF1AO75920 110 aa11.06□□□□□ -0.64
FGFR3-207ENST00000474521 ZNF22P17026 224 aaPredicted RBP11.06□□□□□ -0.64
FGFR3-207ENST00000474521 CHTOPQ9Y3Y2 248 aaKnown RBP11.06□□□□□ -0.64
FGFR3-207ENST00000474521 GAGE2EQ4V326 116 aa11.05□□□□□ -0.64
FGFR3-207ENST00000474521 GAGE2DQ9UEU5 116 aa11.05□□□□□ -0.64
FGFR3-207ENST00000474521 IGLV5-39A0A0G2JS06 123 aa11.04□□□□□ -0.64
FGFR3-207ENST00000474521 LINC00310P59036 64 aa11.04□□□□□ -0.64
FGFR3-207ENST00000474521 FLG2Q5D862 2391 aaPredicted RBP11.03□□□□□ -0.64
FGFR3-207ENST00000474521 C11orf86A6NJI1 115 aa11.03□□□□□ -0.64
FGFR3-207ENST00000474521 LEPROTL1O95214 131 aa11.03□□□□□ -0.64
FGFR3-207ENST00000474521 MYCBP2O75592 4640 aa11.03□□□□□ -0.64
FGFR3-207ENST00000474521 TMEM170BQ5T4T1 132 aa11.02□□□□□ -0.65
FGFR3-207ENST00000474521 NUPR1O60356 82 aa11□□□□□ -0.65
FGFR3-207ENST00000474521 PRR3P79522 188 aaKnown RBP11□□□□□ -0.65
FGFR3-207ENST00000474521 HSPB8Q9UJY1 196 aa11□□□□□ -0.65
FGFR3-207ENST00000474521 C9orf129Q5T035 196 aaKnown RBP10.99□□□□□ -0.65
FGFR3-207ENST00000474521 SFTA2Q6UW10 78 aa10.99□□□□□ -0.65
FGFR3-207ENST00000474521 FAM168BA1KXE4 195 aa10.98□□□□□ -0.65
FGFR3-207ENST00000474521 KRTAP29-1A8MX34 341 aaPredicted RBP10.98□□□□□ -0.65
FGFR3-207ENST00000474521 HIST1H2BKO60814 126 aa10.98□□□□□ -0.65
FGFR3-207ENST00000474521 HIST1H2BJP06899 126 aa10.98□□□□□ -0.65
FGFR3-207ENST00000474521 HIST1H2BOP23527 126 aa10.98□□□□□ -0.65
FGFR3-207ENST00000474521 HIST1H2BBP33778 126 aa10.98□□□□□ -0.65
FGFR3-207ENST00000474521 HNRNPA3P51991 378 aaKnown RBP10.98□□□□□ -0.65
FGFR3-207ENST00000474521 HIST1H2BDP58876 126 aa10.98□□□□□ -0.65
FGFR3-207ENST00000474521 HIST1H2BCP62807 126 aa10.98□□□□□ -0.65
FGFR3-207ENST00000474521 HIST2H2BEQ16778 126 aa10.98□□□□□ -0.65
FGFR3-207ENST00000474521 HIST2H2BFQ5QNW6 126 aaPredicted RBP10.98□□□□□ -0.65
FGFR3-207ENST00000474521 HIST1H2BHQ93079 126 aa10.98□□□□□ -0.65
FGFR3-207ENST00000474521 HIST1H2BNQ99877 126 aa10.98□□□□□ -0.65
FGFR3-207ENST00000474521 HIST1H2BMQ99879 126 aa10.98□□□□□ -0.65
FGFR3-207ENST00000474521 PKHD1L1Q86WI1 4243 aa10.98□□□□□ -0.65
FGFR3-207ENST00000474521 PHF5AQ7RTV0 110 aaKnown RBP10.97□□□□□ -0.65
FGFR3-207ENST00000474521 TMEM223A0PJW6 202 aa10.96□□□□□ -0.65
FGFR3-207ENST00000474521 OXTP01178 125 aa10.96□□□□□ -0.65
FGFR3-207ENST00000474521 ODF1Q14990 250 aa10.96□□□□□ -0.65
FGFR3-207ENST00000474521 FAM19A5Q7Z5A7 132 aaPredicted RBP10.96□□□□□ -0.65
FGFR3-207ENST00000474521 FABP4P15090 132 aa10.95□□□□□ -0.66
FGFR3-207ENST00000474521 S100A1P23297 94 aa10.95□□□□□ -0.66
FGFR3-207ENST00000474521 KRTAP7-1Q8IUC3 87 aa10.95□□□□□ -0.66
FGFR3-207ENST00000474521 XAGE1AQ9HD64 81 aa10.94□□□□□ -0.66
FGFR3-207ENST00000474521 H0Y8G0 127 aa10.93□□□□□ -0.66
FGFR3-207ENST00000474521 M0QXV9 152 aa10.93□□□□□ -0.66
FGFR3-207ENST00000474521 COX17Q14061 63 aa10.93□□□□□ -0.66
FGFR3-207ENST00000474521 PSORS1C2Q9UIG4 136 aa10.93□□□□□ -0.66
FGFR3-207ENST00000474521 J3QL48 77 aa10.92□□□□□ -0.66
FGFR3-207ENST00000474521 PLNP26678 52 aa10.92□□□□□ -0.66
FGFR3-207ENST00000474521 MAP1LC3CQ9BXW4 147 aa10.92□□□□□ -0.66
FGFR3-207ENST00000474521 DMBT1Q9UGM3 2413 aaPredicted RBP10.92□□□□□ -0.66
FGFR3-207ENST00000474521 SPINK6Q6UWN8 80 aa10.91□□□□□ -0.66
FGFR3-207ENST00000474521 ZNF625Q96I27 306 aaPredicted RBP10.91□□□□□ -0.66
FGFR3-207ENST00000474521 ERG28Q9UKR5 140 aa10.91□□□□□ -0.66
FGFR3-207ENST00000474521 PLA2G2DQ9UNK4 145 aa10.91□□□□□ -0.66
FGFR3-207ENST00000474521 SRSF9Q13242 221 aaKnown RBP eCLIP10.9□□□□□ -0.663e-9■□□□□ 8.5
FGFR3-207ENST00000474521 TP73-AS1Q9UF72 201 aa10.9□□□□□ -0.66
FGFR3-207ENST00000474521 PFN2P35080 140 aa10.89□□□□□ -0.67
FGFR3-207ENST00000474521 LBHQ53QV2 105 aaPredicted RBP10.89□□□□□ -0.67
FGFR3-207ENST00000474521 COA6Q5JTJ3 125 aaKnown RBP10.89□□□□□ -0.67
FGFR3-207ENST00000474521 SERTAD4-AS1Q5TG53 156 aa10.89□□□□□ -0.67
FGFR3-207ENST00000474521 C22orf24Q9Y442 160 aa10.89□□□□□ -0.67
FGFR3-207ENST00000474521 LRP1Q07954 4544 aaKnown RBP10.88□□□□□ -0.67
FGFR3-207ENST00000474521 DPM2O94777 84 aa10.88□□□□□ -0.67
FGFR3-207ENST00000474521 UBE2BP63146 152 aa10.88□□□□□ -0.67
FGFR3-207ENST00000474521 C1orf137Q5JT78 98 aa10.88□□□□□ -0.67
FGFR3-207ENST00000474521 FAT3Q8TDW7 4589 aa10.87□□□□□ -0.67
FGFR3-207ENST00000474521 IGKCP01834 107 aa10.87□□□□□ -0.67
FGFR3-207ENST00000474521 IGLV5-37A0A075B6J1 123 aa10.85□□□□□ -0.67
FGFR3-207ENST00000474521 ATP6V1G1O75348 118 aa10.85□□□□□ -0.67
FGFR3-207ENST00000474521 HERV-K104P63124 156 aa10.85□□□□□ -0.67
FGFR3-207ENST00000474521 MRPL55Q7Z7F7 128 aaKnown RBP10.85□□□□□ -0.67
FGFR3-207ENST00000474521 KRTAP11-1Q8IUC1 163 aa10.85□□□□□ -0.67
FGFR3-207ENST00000474521 LINC00587B1AMM8 73 aa10.84□□□□□ -0.67
FGFR3-207ENST00000474521 SYS1-DBNDD2H3BUS1 97 aa10.84□□□□□ -0.67
FGFR3-207ENST00000474521 LEPROTO15243 131 aa10.84□□□□□ -0.67
FGFR3-207ENST00000474521 HERVK_113P61574 105 aa10.84□□□□□ -0.67
FGFR3-207ENST00000474521 PLEKHB2Q96CS7 222 aa10.84□□□□□ -0.67
FGFR3-207ENST00000474521 SND1-IT1Q9HBX3 110 aa10.84□□□□□ -0.67
FGFR3-207ENST00000474521 HERC1Q15751 4861 aa10.83□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 57.6 ms