RNA–Protein interactions for RNA: ENST00000473961.5

BRCA1-212, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 2

Gene BRCA1, Length 958 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-212ENST00000473961 SNRPD3P62318 126 aaKnown RBP2.19□□□□□ -2.06
BRCA1-212ENST00000473961 DYNLRB2Q8TF09 96 aa2.19□□□□□ -2.06
BRCA1-212ENST00000473961 RPL39LQ96EH5 51 aaKnown RBP2.19□□□□□ -2.06
BRCA1-212ENST00000473961 LINC00474Q9P2X8 69 aa2.19□□□□□ -2.06
BRCA1-212ENST00000473961 DSCAMO60469 2012 aa2.18□□□□□ -2.06
BRCA1-212ENST00000473961 PCNX2A6NKB5 2137 aa2.18□□□□□ -2.06
BRCA1-212ENST00000473961 PRRC2BQ5JSZ5 2229 aaKnown RBP2.18□□□□□ -2.06
BRCA1-212ENST00000473961 MED12Q93074 2177 aa2.18□□□□□ -2.06
BRCA1-212ENST00000473961 IGLV10-54A0A075B6I4 117 aa2.18□□□□□ -2.06
BRCA1-212ENST00000473961 TRAV23DV6A0A075B6W5 121 aa2.18□□□□□ -2.06
BRCA1-212ENST00000473961 TRAV21A0A0B4J279 112 aa2.18□□□□□ -2.06
BRCA1-212ENST00000473961 A0A1W2PNM2 257 aa2.18□□□□□ -2.06
BRCA1-212ENST00000473961 F8WEM9 126 aa2.18□□□□□ -2.06
BRCA1-212ENST00000473961 JMJD7-PLA2G4BH0Y9G9 81 aa2.18□□□□□ -2.06
BRCA1-212ENST00000473961 NDUFA1O15239 70 aa2.18□□□□□ -2.06
BRCA1-212ENST00000473961 P0C880 135 aa2.18□□□□□ -2.06
BRCA1-212ENST00000473961 RPL39P62891 51 aaKnown RBP2.18□□□□□ -2.06
BRCA1-212ENST00000473961 SS18Q15532 418 aa2.18□□□□□ -2.06
BRCA1-212ENST00000473961 ESRGQ1W209 222 aa2.18□□□□□ -2.06
BRCA1-212ENST00000473961 DEFB133Q30KQ1 61 aa2.18□□□□□ -2.06
BRCA1-212ENST00000473961 Q8N2B8 174 aa2.18□□□□□ -2.06
BRCA1-212ENST00000473961 LINC00308Q8TCZ7 52 aa2.18□□□□□ -2.06
BRCA1-212ENST00000473961 GAFA1Q96PS6 74 aa2.18□□□□□ -2.06
BRCA1-212ENST00000473961 UBL5Q9BZL1 73 aa2.18□□□□□ -2.06
BRCA1-212ENST00000473961 C14orf132Q9NPU4 83 aa2.18□□□□□ -2.06
BRCA1-212ENST00000473961 IGHV3-64A0A075B6Q5 118 aa2.17□□□□□ -2.06
BRCA1-212ENST00000473961 C5orf67F2Z3F1 127 aa2.17□□□□□ -2.06
BRCA1-212ENST00000473961 BUB1B-PAK6H3BSN5 160 aa2.17□□□□□ -2.06
BRCA1-212ENST00000473961 MIFP14174 115 aa2.17□□□□□ -2.06
BRCA1-212ENST00000473961 Q1T7F1 81 aa2.17□□□□□ -2.06
BRCA1-212ENST00000473961 ENHOQ6UWT2 76 aa2.17□□□□□ -2.06
BRCA1-212ENST00000473961 VMO1Q7Z5L0 202 aa2.17□□□□□ -2.06
BRCA1-212ENST00000473961 PSORS1C2Q9UIG4 136 aa2.17□□□□□ -2.06
BRCA1-212ENST00000473961 DSCAML1Q8TD84 2053 aa2.17□□□□□ -2.06
BRCA1-212ENST00000473961 TNCP24821 2201 aa2.17□□□□□ -2.06
BRCA1-212ENST00000473961 PRB4P10163 310 aaPredicted RBP2.16□□□□□ -2.06
BRCA1-212ENST00000473961 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa2.16□□□□□ -2.06
BRCA1-212ENST00000473961 CNEP1R1Q8N9A8 125 aa2.16□□□□□ -2.06
BRCA1-212ENST00000473961 C11orf68Q9H3H3 251 aaKnown RBP2.16□□□□□ -2.06
BRCA1-212ENST00000473961 ORMDL1Q9P0S3 153 aa2.16□□□□□ -2.06
BRCA1-212ENST00000473961 TMEM256-PLSCR3K7ERE1 68 aa2.15□□□□□ -2.07
BRCA1-212ENST00000473961 M0QY20 66 aa2.15□□□□□ -2.07
BRCA1-212ENST00000473961 CRPP02741 224 aa2.15□□□□□ -2.07
BRCA1-212ENST00000473961 APELAP0DMC3 54 aa2.15□□□□□ -2.07
BRCA1-212ENST00000473961 RNASE3P12724 160 aaKnown RBP2.15□□□□□ -2.07
BRCA1-212ENST00000473961 FUSP35637 526 aaKnown RBP eCLIP2.15□□□□□ -2.07
BRCA1-212ENST00000473961 KTN1-AS1Q86SY8 53 aa2.15□□□□□ -2.07
BRCA1-212ENST00000473961 DEFB108BQ8NET1 73 aa2.15□□□□□ -2.07
BRCA1-212ENST00000473961 ZNF625Q96I27 306 aaPredicted RBP2.15□□□□□ -2.07
BRCA1-212ENST00000473961 BPESC1Q9GZL8 116 aa2.15□□□□□ -2.07
BRCA1-212ENST00000473961 XAGE1AQ9HD64 81 aa2.15□□□□□ -2.07
BRCA1-212ENST00000473961 SNURFQ9Y675 71 aa2.15□□□□□ -2.07
BRCA1-212ENST00000473961 IGLV3-9A0A075B6K5 115 aa2.14□□□□□ -2.07
BRCA1-212ENST00000473961 TRBV7-4A0A0J9YYF1 115 aa2.14□□□□□ -2.07
BRCA1-212ENST00000473961 NCR3O14931 201 aa2.14□□□□□ -2.07
BRCA1-212ENST00000473961 GNRH2O43555 120 aa2.14□□□□□ -2.07
BRCA1-212ENST00000473961 ZNF73O43830 326 aaPredicted RBP2.14□□□□□ -2.07
BRCA1-212ENST00000473961 CCL3L1P16619 93 aa2.14□□□□□ -2.07
BRCA1-212ENST00000473961 PDE6GP18545 87 aa2.14□□□□□ -2.07
BRCA1-212ENST00000473961 UBE2BP63146 152 aa2.14□□□□□ -2.07
BRCA1-212ENST00000473961 KLK9Q2XQG4 91 aa2.14□□□□□ -2.07
BRCA1-212ENST00000473961 SOSTDC1Q6X4U4 206 aa2.14□□□□□ -2.07
BRCA1-212ENST00000473961 BRD3OSQ6XYD6 125 aa2.14□□□□□ -2.07
BRCA1-212ENST00000473961 Q6ZS52 159 aa2.14□□□□□ -2.07
BRCA1-212ENST00000473961 TMEM254Q8TBM7 123 aa2.14□□□□□ -2.07
BRCA1-212ENST00000473961 C20orf166-AS1Q96NR2 134 aa2.14□□□□□ -2.07
BRCA1-212ENST00000473961 TTTY12Q9BZ98 90 aa2.14□□□□□ -2.07
BRCA1-212ENST00000473961 KLK9Q9UKQ9 250 aa2.14□□□□□ -2.07
BRCA1-212ENST00000473961 FREM1Q5H8C1 2179 aa2.13□□□□□ -2.07
BRCA1-212ENST00000473961 LOC110117498A0A087WWA1 95 aa2.13□□□□□ -2.07
BRCA1-212ENST00000473961 TRAV10A0A0B4J240 114 aa2.13□□□□□ -2.07
BRCA1-212ENST00000473961 hDV103S1A0JD37 113 aa2.13□□□□□ -2.07
BRCA1-212ENST00000473961 CLPSL1A2RUU4 121 aa2.13□□□□□ -2.07
BRCA1-212ENST00000473961 M0R378 163 aa2.13□□□□□ -2.07
BRCA1-212ENST00000473961 KRTAP10-10P60014 251 aa2.13□□□□□ -2.07
BRCA1-212ENST00000473961 FAM229BQ4G0N7 80 aa2.13□□□□□ -2.07
BRCA1-212ENST00000473961 PHF5AQ7RTV0 110 aaKnown RBP2.13□□□□□ -2.07
BRCA1-212ENST00000473961 ZGRF1Q86YA3 2104 aa2.13□□□□□ -2.07
BRCA1-212ENST00000473961 WFDC9Q8NEX5 89 aa2.13□□□□□ -2.07
BRCA1-212ENST00000473961 SMIM11BQ8TCY0 68 aa2.13□□□□□ -2.07
BRCA1-212ENST00000473961 KAAG1Q9UBP8 84 aa2.13□□□□□ -2.07
BRCA1-212ENST00000473961 DOCK10Q96BY6 2186 aa2.13□□□□□ -2.07
BRCA1-212ENST00000473961 PI4KAP42356 2102 aa2.12□□□□□ -2.07
BRCA1-212ENST00000473961 ASCC3Q8N3C0 2202 aaKnown RBP2.12□□□□□ -2.07
BRCA1-212ENST00000473961 IGKV2-29A2NJV5 120 aaPredicted RBP2.12□□□□□ -2.07
BRCA1-212ENST00000473961 NREPQ16612 68 aa2.12□□□□□ -2.07
BRCA1-212ENST00000473961 Q8N6K4 173 aa2.12□□□□□ -2.07
BRCA1-212ENST00000473961 CDKN2A-AS1Q9UH64 79 aa2.12□□□□□ -2.07
BRCA1-212ENST00000473961 FAM215AQ9Y5M1 114 aa2.12□□□□□ -2.07
BRCA1-212ENST00000473961 MINOS1-NBL1R4GNA1 71 aa2.12□□□□□ -2.07
BRCA1-212ENST00000473961 A0A0C4DFX4 3053 aa2.12□□□□□ -2.07
BRCA1-212ENST00000473961 BRWD1Q9NSI6 2320 aa2.12□□□□□ -2.07
BRCA1-212ENST00000473961 PDE4DIPQ5VU43 2346 aa2.11□□□□□ -2.07
BRCA1-212ENST00000473961 ARFGEF3Q5TH69 2177 aa2.11□□□□□ -2.07
BRCA1-212ENST00000473961 MALRD1Q5VYJ5 2156 aa2.11□□□□□ -2.07
BRCA1-212ENST00000473961 HAMPP81172 84 aa2.11□□□□□ -2.07
BRCA1-212ENST00000473961 FAM74A4Q5TZK3 123 aa2.11□□□□□ -2.07
BRCA1-212ENST00000473961 KRTAP5-7Q6L8G8 165 aa2.11□□□□□ -2.07
BRCA1-212ENST00000473961 ATP11AUNQ6ZP68 121 aa2.11□□□□□ -2.07
BRCA1-212ENST00000473961 Q6ZQT0 140 aa2.11□□□□□ -2.07
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms