RNA–Protein interactions for RNA: ENST00000472679.1

CLK1-209, Transcript of CDC like kinase 1, humanhuman

TSL 2

Gene CLK1, Length 461 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-209ENST00000472679 CDK5RAP2Q96SN8 1893 aa-0.36□□□□□ -2.47
CLK1-209ENST00000472679 ROCK2O75116 1388 aaKnown RBP-0.36□□□□□ -2.47
CLK1-209ENST00000472679 MED23Q9ULK4 1368 aa-0.36□□□□□ -2.47
CLK1-209ENST00000472679 PATJQ8NI35 1801 aa-0.36□□□□□ -2.47
CLK1-209ENST00000472679 RGPD2P0DJD1 1756 aa-0.37□□□□□ -2.47
CLK1-209ENST00000472679 VPS8Q8N3P4 1428 aa-0.37□□□□□ -2.47
CLK1-209ENST00000472679 PLXNA2O75051 1894 aa-0.37□□□□□ -2.47
CLK1-209ENST00000472679 ADCYAP1P18509 176 aa-0.37□□□□□ -2.47
CLK1-209ENST00000472679 UBE2D1P51668 147 aa-0.37□□□□□ -2.47
CLK1-209ENST00000472679 DEFB1P60022 68 aa-0.37□□□□□ -2.47
CLK1-209ENST00000472679 LSM3P62310 102 aaKnown RBP-0.37□□□□□ -2.47
CLK1-209ENST00000472679 UNQ5815/PRO19632Q6UWF5 114 aa-0.37□□□□□ -2.47
CLK1-209ENST00000472679 TSTD1Q8NFU3 115 aa-0.37□□□□□ -2.47
CLK1-209ENST00000472679 MYO7BQ6PIF6 2116 aa-0.37□□□□□ -2.47
CLK1-209ENST00000472679 DOCK2Q92608 1830 aa-0.38□□□□□ -2.47
CLK1-209ENST00000472679 CXorf51AA0A1B0GTR3 108 aa-0.38□□□□□ -2.47
CLK1-209ENST00000472679 DEFB112Q30KQ8 113 aa-0.38□□□□□ -2.47
CLK1-209ENST00000472679 CCDC141Q6ZP82 1450 aa-0.38□□□□□ -2.47
CLK1-209ENST00000472679 MYOM3Q5VTT5 1437 aa-0.38□□□□□ -2.47
CLK1-209ENST00000472679 FANCD2Q9BXW9 1451 aa-0.39□□□□□ -2.47
CLK1-209ENST00000472679 FAM236AA0A1B0GUQ0 79 aa-0.39□□□□□ -2.47
CLK1-209ENST00000472679 FAM236BA0A1B0GV22 79 aa-0.39□□□□□ -2.47
CLK1-209ENST00000472679 H3BSH0 61 aa-0.39□□□□□ -2.47
CLK1-209ENST00000472679 SLC25A5P05141 298 aaKnown RBP-0.39□□□□□ -2.47
CLK1-209ENST00000472679 HELZP42694 1942 aaKnown RBP-0.39□□□□□ -2.47
CLK1-209ENST00000472679 PARP14Q460N5 1801 aa-0.39□□□□□ -2.47
CLK1-209ENST00000472679 CRYBG1Q9Y4K1 1723 aa-0.39□□□□□ -2.47
CLK1-209ENST00000472679 ABCC8Q09428 1581 aa-0.4□□□□□ -2.47
CLK1-209ENST00000472679 NALCNQ8IZF0 1738 aa-0.4□□□□□ -2.47
CLK1-209ENST00000472679 DEFB131BA0A096LNP1 70 aa-0.4□□□□□ -2.47
CLK1-209ENST00000472679 DEFB108AA8MXU0 73 aa-0.4□□□□□ -2.47
CLK1-209ENST00000472679 UQCRQO14949 82 aa-0.4□□□□□ -2.47
CLK1-209ENST00000472679 PITX3O75364 302 aa-0.4□□□□□ -2.47
CLK1-209ENST00000472679 TDRG1Q3Y452 100 aa-0.4□□□□□ -2.47
CLK1-209ENST00000472679 DSCR8Q96T75 97 aa-0.4□□□□□ -2.47
CLK1-209ENST00000472679 UBE2D4Q9Y2X8 147 aa-0.4□□□□□ -2.47
CLK1-209ENST00000472679 ANKRD36BQ8N2N9 1353 aa-0.41□□□□□ -2.47
CLK1-209ENST00000472679 TRBV10-1A0A0K0K1A3 114 aa-0.41□□□□□ -2.48
CLK1-209ENST00000472679 K7EQZ3 153 aa-0.41□□□□□ -2.48
CLK1-209ENST00000472679 POLR2JP52435 117 aaKnown RBP-0.41□□□□□ -2.48
CLK1-209ENST00000472679 CCL18P55774 89 aa-0.41□□□□□ -2.48
CLK1-209ENST00000472679 PCBD1P61457 104 aa-0.41□□□□□ -2.48
CLK1-209ENST00000472679 DEFB136Q30KP8 78 aa-0.41□□□□□ -2.48
CLK1-209ENST00000472679 CCDC115Q96NT0 180 aa-0.41□□□□□ -2.48
CLK1-209ENST00000472679 DDA1Q9BW61 102 aa-0.41□□□□□ -2.48
CLK1-209ENST00000472679 SMPXQ9UHP9 88 aa-0.41□□□□□ -2.48
CLK1-209ENST00000472679 NDUFA12Q9UI09 145 aa-0.41□□□□□ -2.48
CLK1-209ENST00000472679 PLXNB2O15031 1838 aa-0.41□□□□□ -2.48
CLK1-209ENST00000472679 PSME4Q14997 1843 aa-0.42□□□□□ -2.48
CLK1-209ENST00000472679 TRAV17A0A0B4J275 112 aa-0.42□□□□□ -2.48
CLK1-209ENST00000472679 TCRAP04437 139 aa-0.42□□□□□ -2.48
CLK1-209ENST00000472679 CD52P31358 61 aa-0.42□□□□□ -2.48
CLK1-209ENST00000472679 OR9Q1Q8NGQ5 310 aa-0.42□□□□□ -2.48
CLK1-209ENST00000472679 BPESC1Q9GZL8 116 aa-0.42□□□□□ -2.48
CLK1-209ENST00000472679 FAIMQ9NVQ4 179 aa-0.42□□□□□ -2.48
CLK1-209ENST00000472679 CRIPTQ9P021 101 aa-0.42□□□□□ -2.48
CLK1-209ENST00000472679 CEP162Q5TB80 1403 aa-0.42□□□□□ -2.48
CLK1-209ENST00000472679 FOCADQ5VW36 1801 aa-0.43□□□□□ -2.48
CLK1-209ENST00000472679 TOP2AP11388 1531 aaKnown RBP-0.43□□□□□ -2.48
CLK1-209ENST00000472679 IQGAP2Q13576 1575 aa-0.43□□□□□ -2.48
CLK1-209ENST00000472679 NAIPQ13075 1403 aa-0.43□□□□□ -2.48
CLK1-209ENST00000472679 LINC00959A0A1B0GUT2 108 aa-0.43□□□□□ -2.48
CLK1-209ENST00000472679 C9JAW5 83 aa-0.43□□□□□ -2.48
CLK1-209ENST00000472679 ATP11AUNQ6ZP68 121 aa-0.43□□□□□ -2.48
CLK1-209ENST00000472679 U3KQA8 63 aa-0.43□□□□□ -2.48
CLK1-209ENST00000472679 DOCK11Q5JSL3 2073 aa-0.44□□□□□ -2.48
CLK1-209ENST00000472679 AKAP12Q02952 1782 aa-0.44□□□□□ -2.48
CLK1-209ENST00000472679 C9orf92A6NGG3 77 aa-0.44□□□□□ -2.48
CLK1-209ENST00000472679 SDC4P31431 198 aa-0.44□□□□□ -2.48
CLK1-209ENST00000472679 SPAG11AQ6PDA7 123 aa-0.44□□□□□ -2.48
CLK1-209ENST00000472679 TMEM141Q96I45 108 aa-0.44□□□□□ -2.48
CLK1-209ENST00000472679 PRR15LQ9BU68 103 aa-0.44□□□□□ -2.48
CLK1-209ENST00000472679 KIF20BQ96Q89 1820 aa-0.44□□□□□ -2.48
CLK1-209ENST00000472679 IQGAP3Q86VI3 1631 aa-0.45□□□□□ -2.48
CLK1-209ENST00000472679 A0A1B0GV72 72 aa-0.45□□□□□ -2.48
CLK1-209ENST00000472679 K7EP13 123 aa-0.45□□□□□ -2.48
CLK1-209ENST00000472679 OR2H2O95918 312 aa-0.45□□□□□ -2.48
CLK1-209ENST00000472679 FABP1P07148 127 aa-0.45□□□□□ -2.48
CLK1-209ENST00000472679 PYYP10082 97 aa-0.45□□□□□ -2.48
CLK1-209ENST00000472679 UBE2D3P61077 147 aa-0.45□□□□□ -2.48
CLK1-209ENST00000472679 DEFB135Q30KP9 77 aa-0.45□□□□□ -2.48
CLK1-209ENST00000472679 TMEM128Q5BJH2 165 aa-0.45□□□□□ -2.48
CLK1-209ENST00000472679 RPS27LQ71UM5 84 aaKnown RBP-0.45□□□□□ -2.48
CLK1-209ENST00000472679 DEFB108BQ8NET1 73 aa-0.45□□□□□ -2.48
CLK1-209ENST00000472679 AGPAT4-IT1Q9H0P7 198 aa-0.45□□□□□ -2.48
CLK1-209ENST00000472679 TEX49A0A1B0GTD5 131 aa-0.46□□□□□ -2.48
CLK1-209ENST00000472679 PNMA8CA0A1B0GUJ8 204 aa-0.46□□□□□ -2.48
CLK1-209ENST00000472679 A0A1B0GW64 132 aa-0.46□□□□□ -2.48
CLK1-209ENST00000472679 PGRMC1O00264 195 aaKnown RBP-0.46□□□□□ -2.48
CLK1-209ENST00000472679 HMGA1P17096 107 aaKnown RBP-0.46□□□□□ -2.48
CLK1-209ENST00000472679 WFDC2Q14508 124 aa-0.46□□□□□ -2.48
CLK1-209ENST00000472679 SAMD13Q5VXD3 122 aa-0.46□□□□□ -2.48
CLK1-209ENST00000472679 TOMM20LQ6UXN7 152 aa-0.46□□□□□ -2.48
CLK1-209ENST00000472679 C10orf82Q8WW14 230 aa-0.46□□□□□ -2.48
CLK1-209ENST00000472679 Q96NJ1 140 aa-0.46□□□□□ -2.48
CLK1-209ENST00000472679 METTL1Q9UBP6 276 aaKnown RBP-0.46□□□□□ -2.48
CLK1-209ENST00000472679 S4R3F8 94 aa-0.46□□□□□ -2.48
CLK1-209ENST00000472679 SCTP09683 121 aa-0.47□□□□□ -2.48
CLK1-209ENST00000472679 ELOF1P60002 83 aaKnown RBP-0.47□□□□□ -2.48
CLK1-209ENST00000472679 EMX2Q04743 252 aa-0.47□□□□□ -2.48
Retrieved 100 of 20,778 RNA–protein pairs in 163.5 ms