RNA–Protein interactions for RNA: ENST00000472103.5

SMARCD3-207, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 3, humanhuman

TSL 5

Gene SMARCD3, Length 798 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD3-207ENST00000472103 PKHD1P08F94 4074 aa9.42□□□□□ -0.9
SMARCD3-207ENST00000472103 C6orf48Q9UBA6 75 aa9.42□□□□□ -0.9
SMARCD3-207ENST00000472103 TRAV16A0A0A6YYK6 109 aaPredicted RBP9.41□□□□□ -0.9
SMARCD3-207ENST00000472103 NDUFA1O15239 70 aa9.41□□□□□ -0.9
SMARCD3-207ENST00000472103 PRSS2P07478 247 aa9.41□□□□□ -0.9
SMARCD3-207ENST00000472103 PLNP26678 52 aa9.41□□□□□ -0.9
SMARCD3-207ENST00000472103 C6orf226Q5I0X4 101 aa9.41□□□□□ -0.9
SMARCD3-207ENST00000472103 SDIM1Q6ZPB5 146 aa9.41□□□□□ -0.9
SMARCD3-207ENST00000472103 PANO1I0J062 215 aa9.4□□□□□ -0.9
SMARCD3-207ENST00000472103 TSPEAR-AS2P59090 65 aa9.39□□□□□ -0.91
SMARCD3-207ENST00000472103 C9orf116Q5BN46 136 aaPredicted RBP9.39□□□□□ -0.91
SMARCD3-207ENST00000472103 F8WDY8 70 aa9.38□□□□□ -0.91
SMARCD3-207ENST00000472103 CHTF8P0CG12 524 aa9.38□□□□□ -0.91
SMARCD3-207ENST00000472103 ATOH7Q8N100 152 aa9.38□□□□□ -0.91
SMARCD3-207ENST00000472103 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP9.38□□□□□ -0.91
SMARCD3-207ENST00000472103 DNAH8Q96JB1 4490 aa9.38□□□□□ -0.91
SMARCD3-207ENST00000472103 BIRC6Q9NR09 4857 aa9.38□□□□□ -0.91
SMARCD3-207ENST00000472103 CKS1BP61024 79 aa9.37□□□□□ -0.91
SMARCD3-207ENST00000472103 HAMPP81172 84 aa9.37□□□□□ -0.91
SMARCD3-207ENST00000472103 RNF151Q2KHN1 245 aa9.37□□□□□ -0.91
SMARCD3-207ENST00000472103 STPG4Q8N801 248 aa9.37□□□□□ -0.91
SMARCD3-207ENST00000472103 A0A096LNI7 61 aa9.36□□□□□ -0.91
SMARCD3-207ENST00000472103 LEPROTO15243 131 aa9.36□□□□□ -0.91
SMARCD3-207ENST00000472103 CXCL5P42830 114 aa9.36□□□□□ -0.91
SMARCD3-207ENST00000472103 Q6ZSA8 131 aa9.36□□□□□ -0.91
SMARCD3-207ENST00000472103 TRBV30A0A0K0K1B3 111 aa9.35□□□□□ -0.91
SMARCD3-207ENST00000472103 C20orf202A1L168 122 aa9.35□□□□□ -0.91
SMARCD3-207ENST00000472103 ZNF625Q96I27 306 aaPredicted RBP9.35□□□□□ -0.91
SMARCD3-207ENST00000472103 IGKV2D-26A0A0A0MRZ7 120 aa9.34□□□□□ -0.91
SMARCD3-207ENST00000472103 E9PLD3 99 aa9.34□□□□□ -0.91
SMARCD3-207ENST00000472103 XGP55808 180 aa9.34□□□□□ -0.91
SMARCD3-207ENST00000472103 HERVK_113P61574 105 aa9.34□□□□□ -0.91
SMARCD3-207ENST00000472103 APOBP04114 4563 aaKnown RBP9.33□□□□□ -0.92
SMARCD3-207ENST00000472103 IGKV2-24A0A0C4DH68 120 aa9.33□□□□□ -0.92
SMARCD3-207ENST00000472103 LOC107984640A0A0U1RRK4 108 aa9.33□□□□□ -0.92
SMARCD3-207ENST00000472103 TLX1NBP0CAT3 122 aa9.33□□□□□ -0.92
SMARCD3-207ENST00000472103 RPL18AQ02543 176 aaKnown RBP9.33□□□□□ -0.92
SMARCD3-207ENST00000472103 GAGE2BQ13066 116 aa9.33□□□□□ -0.92
SMARCD3-207ENST00000472103 MAJINQ3KP22 176 aa9.33□□□□□ -0.92
SMARCD3-207ENST00000472103 ANKRD39Q53RE8 183 aa9.33□□□□□ -0.92
SMARCD3-207ENST00000472103 Q6ZRP5 223 aa9.33□□□□□ -0.92
SMARCD3-207ENST00000472103 J3QQQ9 107 aa9.32□□□□□ -0.92
SMARCD3-207ENST00000472103 PLEKHB2Q96CS7 222 aa9.32□□□□□ -0.92
SMARCD3-207ENST00000472103 PTTG1IPP53801 180 aa9.31□□□□□ -0.92
SMARCD3-207ENST00000472103 CIRBPQ14011 172 aaKnown RBP9.31□□□□□ -0.92
SMARCD3-207ENST00000472103 SPACA4Q8TDM5 124 aa9.31□□□□□ -0.92
SMARCD3-207ENST00000472103 TTTY13Q9BZ97 58 aa9.31□□□□□ -0.92
SMARCD3-207ENST00000472103 NDUFA12Q9UI09 145 aa9.31□□□□□ -0.92
SMARCD3-207ENST00000472103 SCGB1D1O95968 90 aa9.3□□□□□ -0.92
SMARCD3-207ENST00000472103 GAGE2EQ4V326 116 aa9.3□□□□□ -0.92
SMARCD3-207ENST00000472103 SCXQ7RTU7 201 aa9.3□□□□□ -0.92
SMARCD3-207ENST00000472103 GAGE2DQ9UEU5 116 aa9.3□□□□□ -0.92
SMARCD3-207ENST00000472103 NDUFC2-KCTD14E9PQ53 114 aa9.29□□□□□ -0.92
SMARCD3-207ENST00000472103 LGALS3P17931 250 aaKnown RBP9.29□□□□□ -0.92
SMARCD3-207ENST00000472103 CIRBP-AS1Q8TBR5 109 aa9.29□□□□□ -0.92
SMARCD3-207ENST00000472103 KRTAP17-1Q9BYP8 105 aa9.29□□□□□ -0.92
SMARCD3-207ENST00000472103 KIAA1109Q2LD37 5005 aa9.28□□□□□ -0.92
SMARCD3-207ENST00000472103 PFN2P35080 140 aa9.28□□□□□ -0.92
SMARCD3-207ENST00000472103 C9orf129Q5T035 196 aaKnown RBP9.28□□□□□ -0.92
SMARCD3-207ENST00000472103 ERG28Q9UKR5 140 aa9.28□□□□□ -0.92
SMARCD3-207ENST00000472103 A0A087WYN8 130 aa9.27□□□□□ -0.93
SMARCD3-207ENST00000472103 A0A0U1RRA0 63 aa9.27□□□□□ -0.93
SMARCD3-207ENST00000472103 A0A1W2PNN7 141 aa9.27□□□□□ -0.93
SMARCD3-207ENST00000472103 CDK2AP2O75956 126 aa9.27□□□□□ -0.93
SMARCD3-207ENST00000472103 JOSD1Q15040 202 aaPredicted RBP9.27□□□□□ -0.93
SMARCD3-207ENST00000472103 RYR1P21817 5038 aa9.27□□□□□ -0.93
SMARCD3-207ENST00000472103 MYMXA0A1B0GTQ4 84 aa9.26□□□□□ -0.93
SMARCD3-207ENST00000472103 KRTAP7-1Q8IUC3 87 aa9.26□□□□□ -0.93
SMARCD3-207ENST00000472103 XAGE1AQ9HD64 81 aa9.26□□□□□ -0.93
SMARCD3-207ENST00000472103 FAM168BA1KXE4 195 aa9.25□□□□□ -0.93
SMARCD3-207ENST00000472103 SMIM13P0DJ93 91 aa9.25□□□□□ -0.93
SMARCD3-207ENST00000472103 PYY3Q5JQD4 70 aa9.25□□□□□ -0.93
SMARCD3-207ENST00000472103 PKIGQ9Y2B9 76 aa9.25□□□□□ -0.93
SMARCD3-207ENST00000472103 NMUP48645 174 aa9.24□□□□□ -0.93
SMARCD3-207ENST00000472103 AKR1D1P51857 326 aa9.24□□□□□ -0.93
SMARCD3-207ENST00000472103 HERV-K104P63124 156 aa9.24□□□□□ -0.93
SMARCD3-207ENST00000472103 MEIG1Q5JSS6 88 aa9.24□□□□□ -0.93
SMARCD3-207ENST00000472103 SFTA2Q6UW10 78 aa9.24□□□□□ -0.93
SMARCD3-207ENST00000472103 PCP2Q8IVA1 136 aa9.24□□□□□ -0.93
SMARCD3-207ENST00000472103 DPH3Q96FX2 82 aa9.24□□□□□ -0.93
SMARCD3-207ENST00000472103 A0A0J9YXY3 114 aa9.23□□□□□ -0.93
SMARCD3-207ENST00000472103 SMR3BP02814 79 aaPredicted RBP9.23□□□□□ -0.93
SMARCD3-207ENST00000472103 LINC00158P58513 81 aa9.23□□□□□ -0.93
SMARCD3-207ENST00000472103 PLAC8Q9NZF1 115 aa9.23□□□□□ -0.93
SMARCD3-207ENST00000472103 HSPG2P98160 4391 aa9.22□□□□□ -0.93
SMARCD3-207ENST00000472103 ZNF815PA8K554 130 aa9.22□□□□□ -0.93
SMARCD3-207ENST00000472103 EPM2AB3EWF7 344 aa9.22□□□□□ -0.93
SMARCD3-207ENST00000472103 LINC00474Q9P2X8 69 aa9.22□□□□□ -0.93
SMARCD3-207ENST00000472103 TP73-AS1Q9UF72 201 aa9.22□□□□□ -0.93
SMARCD3-207ENST00000472103 COX17Q14061 63 aa9.21□□□□□ -0.94
SMARCD3-207ENST00000472103 SERTAD4-AS1Q5TG53 156 aa9.21□□□□□ -0.94
SMARCD3-207ENST00000472103 DAND5Q8N907 189 aa9.21□□□□□ -0.94
SMARCD3-207ENST00000472103 SND1-IT1Q9HBX3 110 aa9.21□□□□□ -0.94
SMARCD3-207ENST00000472103 HSBP1L1C9JCN9 74 aa9.2□□□□□ -0.94
SMARCD3-207ENST00000472103 FAM19A5Q7Z5A7 132 aaPredicted RBP9.2□□□□□ -0.94
SMARCD3-207ENST00000472103 MIR7-3HGQ8N6C7 128 aa9.2□□□□□ -0.94
SMARCD3-207ENST00000472103 Q8NDZ9 215 aa9.2□□□□□ -0.94
SMARCD3-207ENST00000472103 ADAMTSL4-AS1Q5T5F5 129 aa9.19□□□□□ -0.94
SMARCD3-207ENST00000472103 LITAFQ99732 161 aa9.19□□□□□ -0.94
SMARCD3-207ENST00000472103 PHF5AQ7RTV0 110 aaKnown RBP9.18□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 44.1 ms