RNA–Protein interactions for RNA: ENST00000471968.1

HDAC3-206, Transcript of histone deacetylase 3, humanhuman

TSL 3

Gene HDAC3, Length 529 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-206ENST00000471968 MRPL54Q6P161 138 aaKnown RBP3.48□□□□□ -1.85
HDAC3-206ENST00000471968 SPAG11AQ6PDA7 123 aa3.48□□□□□ -1.85
HDAC3-206ENST00000471968 PRNTQ86SH4 94 aa3.48□□□□□ -1.85
HDAC3-206ENST00000471968 BAGE3Q86Y29 109 aa3.48□□□□□ -1.85
HDAC3-206ENST00000471968 BAGE2Q86Y30 109 aa3.48□□□□□ -1.85
HDAC3-206ENST00000471968 CHCHD10Q8WYQ3 142 aaPredicted RBP3.48□□□□□ -1.85
HDAC3-206ENST00000471968 GNB1LQ9BYB4 327 aa3.48□□□□□ -1.85
HDAC3-206ENST00000471968 ST20Q9HBF5 79 aa3.48□□□□□ -1.85
HDAC3-206ENST00000471968 NDUFA12Q9UI09 145 aa3.48□□□□□ -1.85
HDAC3-206ENST00000471968 EPDR1Q9UM22 224 aa3.48□□□□□ -1.85
HDAC3-206ENST00000471968 A0A1W2PRE2 83 aa3.47□□□□□ -1.85
HDAC3-206ENST00000471968 GRIFINA4D1Z8 144 aa3.47□□□□□ -1.85
HDAC3-206ENST00000471968 TCRAP04437 139 aa3.47□□□□□ -1.85
HDAC3-206ENST00000471968 STAG3L2P0CL84 134 aa3.47□□□□□ -1.85
HDAC3-206ENST00000471968 STAG3L3P0CL85 134 aa3.47□□□□□ -1.85
HDAC3-206ENST00000471968 HINT1P49773 126 aaPredicted RBP3.47□□□□□ -1.85
HDAC3-206ENST00000471968 CAMPP49913 170 aa3.47□□□□□ -1.85
HDAC3-206ENST00000471968 KRTDAPP60985 99 aa3.47□□□□□ -1.85
HDAC3-206ENST00000471968 DERL1Q9BUN8 251 aa3.47□□□□□ -1.85
HDAC3-206ENST00000471968 MRPL18Q9H0U6 180 aaKnown RBP3.47□□□□□ -1.85
HDAC3-206ENST00000471968 IL36BQ9NZH7 164 aa3.47□□□□□ -1.85
HDAC3-206ENST00000471968 IGHV1-58A0A0C4DH39 117 aa3.46□□□□□ -1.86
HDAC3-206ENST00000471968 PEX7O00628 323 aa3.46□□□□□ -1.86
HDAC3-206ENST00000471968 TAX1BP3O14907 124 aa3.46□□□□□ -1.86
HDAC3-206ENST00000471968 C3orf79P0CE67 100 aa3.46□□□□□ -1.86
HDAC3-206ENST00000471968 SPRR2EP22531 72 aa3.46□□□□□ -1.86
HDAC3-206ENST00000471968 SPRR2BP35325 72 aa3.46□□□□□ -1.86
HDAC3-206ENST00000471968 SPRR2AP35326 72 aa3.46□□□□□ -1.86
HDAC3-206ENST00000471968 RPL28P46779 137 aaKnown RBP3.46□□□□□ -1.86
HDAC3-206ENST00000471968 RASL11AQ6T310 242 aa3.46□□□□□ -1.86
HDAC3-206ENST00000471968 GTF2H5Q6ZYL4 71 aa3.46□□□□□ -1.86
HDAC3-206ENST00000471968 NUP35Q8NFH5 326 aa3.46□□□□□ -1.86
HDAC3-206ENST00000471968 OR10G8Q8NGN5 311 aa3.46□□□□□ -1.86
HDAC3-206ENST00000471968 BORCS7Q96B45 105 aa3.46□□□□□ -1.86
HDAC3-206ENST00000471968 SGK494Q96LW2 274 aa3.46□□□□□ -1.86
HDAC3-206ENST00000471968 PMCHL2Q9BQD1 86 aa3.46□□□□□ -1.86
HDAC3-206ENST00000471968 C11orf21Q9P2W6 132 aa3.46□□□□□ -1.86
HDAC3-206ENST00000471968 PSG8Q9UQ74 426 aa3.46□□□□□ -1.86
HDAC3-206ENST00000471968 ARL2-SNX15V9GYD0 113 aa3.46□□□□□ -1.86
HDAC3-206ENST00000471968 AHNAK2Q8IVF2 5795 aa3.45□□□□□ -1.86
HDAC3-206ENST00000471968 IGLV4-69A0A075B6H9 119 aa3.45□□□□□ -1.86
HDAC3-206ENST00000471968 A0A1B0GUV1 79 aa3.45□□□□□ -1.86
HDAC3-206ENST00000471968 FABP5P3A8MUU1 101 aa3.45□□□□□ -1.86
HDAC3-206ENST00000471968 SEC11AP67812 179 aa3.45□□□□□ -1.86
HDAC3-206ENST00000471968 TMEM97Q5BJF2 176 aa3.45□□□□□ -1.86
HDAC3-206ENST00000471968 BVES-AS1Q5T3Y7 98 aa3.45□□□□□ -1.86
HDAC3-206ENST00000471968 KRTAP7-1Q8IUC3 87 aa3.45□□□□□ -1.86
HDAC3-206ENST00000471968 MTURNQ8N3F0 131 aa3.45□□□□□ -1.86
HDAC3-206ENST00000471968 C3orf22Q8N5N4 141 aa3.45□□□□□ -1.86
HDAC3-206ENST00000471968 OR5A1Q8NGJ0 315 aa3.45□□□□□ -1.86
HDAC3-206ENST00000471968 FMC1Q96HJ9 113 aa3.45□□□□□ -1.86
HDAC3-206ENST00000471968 TRAV34A0A0B4J273 112 aa3.44□□□□□ -1.86
HDAC3-206ENST00000471968 IGHV1-24A0A0C4DH33 117 aa3.44□□□□□ -1.86
HDAC3-206ENST00000471968 TRBV6-1A0A0K0K1D8 114 aa3.44□□□□□ -1.86
HDAC3-206ENST00000471968 PAGE4O60829 102 aa3.44□□□□□ -1.86
HDAC3-206ENST00000471968 PMCHP20382 165 aa3.44□□□□□ -1.86
HDAC3-206ENST00000471968 PIK3CD-AS1Q5SR53 167 aa3.44□□□□□ -1.86
HDAC3-206ENST00000471968 SLC25A34Q6PIV7 304 aa3.44□□□□□ -1.86
HDAC3-206ENST00000471968 C11orf52Q96A22 123 aa3.44□□□□□ -1.86
HDAC3-206ENST00000471968 TMSB15BA0A087X1C1 80 aa3.43□□□□□ -1.86
HDAC3-206ENST00000471968 A6NDN8 102 aa3.43□□□□□ -1.86
HDAC3-206ENST00000471968 GAGE10A6NGK3 116 aa3.43□□□□□ -1.86
HDAC3-206ENST00000471968 K7EP34 96 aa3.43□□□□□ -1.86
HDAC3-206ENST00000471968 AMMECR1LQ6DCA0 310 aa3.43□□□□□ -1.86
HDAC3-206ENST00000471968 TMEM136Q6ZRR5 245 aa3.43□□□□□ -1.86
HDAC3-206ENST00000471968 Q86TA4 180 aa3.43□□□□□ -1.86
HDAC3-206ENST00000471968 CAMK2N2Q96S95 79 aa3.43□□□□□ -1.86
HDAC3-206ENST00000471968 OSTCQ9NRP0 149 aa3.43□□□□□ -1.86
HDAC3-206ENST00000471968 NAT8BQ9UHF3 227 aa3.43□□□□□ -1.86
HDAC3-206ENST00000471968 TRBV20OR9-2A0A075B6H5 130 aa3.42□□□□□ -1.86
HDAC3-206ENST00000471968 MUC21A0A140T8X8 626 aa3.42□□□□□ -1.86
HDAC3-206ENST00000471968 C19orf71A6NCJ1 209 aa3.42□□□□□ -1.86
HDAC3-206ENST00000471968 F2Z2F3 143 aa3.42□□□□□ -1.86
HDAC3-206ENST00000471968 H3BRM9 83 aa3.42□□□□□ -1.86
HDAC3-206ENST00000471968 H3BVH4 76 aa3.42□□□□□ -1.86
HDAC3-206ENST00000471968 J3QR89 54 aa3.42□□□□□ -1.86
HDAC3-206ENST00000471968 M0R381 172 aa3.42□□□□□ -1.86
HDAC3-206ENST00000471968 SH2D1AO60880 128 aa3.42□□□□□ -1.86
HDAC3-206ENST00000471968 HSBP1O75506 76 aa3.42□□□□□ -1.86
HDAC3-206ENST00000471968 APCSP02743 223 aa3.42□□□□□ -1.86
HDAC3-206ENST00000471968 XCL1P47992 114 aa3.42□□□□□ -1.86
HDAC3-206ENST00000471968 SPANXN1Q5VSR9 72 aa3.42□□□□□ -1.86
HDAC3-206ENST00000471968 Q6ZVH6 145 aa3.42□□□□□ -1.86
HDAC3-206ENST00000471968 AP1S3Q96PC3 154 aa3.42□□□□□ -1.86
HDAC3-206ENST00000471968 TPPP3Q9BW30 176 aa3.42□□□□□ -1.86
HDAC3-206ENST00000471968 TMEM191AQ9H0A3 160 aa3.42□□□□□ -1.86
HDAC3-206ENST00000471968 V9GYV3 84 aa3.42□□□□□ -1.86
HDAC3-206ENST00000471968 SCO2A0A1W2PP80 73 aa3.41□□□□□ -1.86
HDAC3-206ENST00000471968 C9orf118A6NHY6 69 aa3.41□□□□□ -1.86
HDAC3-206ENST00000471968 OR5AL1P0C617 328 aa3.41□□□□□ -1.86
HDAC3-206ENST00000471968 NTF3P20783 257 aa3.41□□□□□ -1.86
HDAC3-206ENST00000471968 GNG4P50150 75 aa3.41□□□□□ -1.86
HDAC3-206ENST00000471968 ZNF80P51504 273 aaPredicted RBP3.41□□□□□ -1.86
HDAC3-206ENST00000471968 FA2HQ7L5A8 372 aa3.41□□□□□ -1.86
HDAC3-206ENST00000471968 ATP5L2Q7Z4Y8 100 aa3.41□□□□□ -1.86
HDAC3-206ENST00000471968 OCC1Q8TAD7 63 aa3.41□□□□□ -1.86
HDAC3-206ENST00000471968 C18orf32Q8TCD1 76 aa3.41□□□□□ -1.86
HDAC3-206ENST00000471968 CHCHD1Q96BP2 118 aaKnown RBP3.41□□□□□ -1.86
HDAC3-206ENST00000471968 SIGMAR1Q99720 223 aa3.41□□□□□ -1.86
HDAC3-206ENST00000471968 SMIM27A0A1W2PRY6 76 aa3.4□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 72.2 ms