RNA–Protein interactions for RNA: ENST00000471751.5

SNX4-203, Transcript of sorting nexin 4, humanhuman

TSL 2

Gene SNX4, Length 1,308 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX4-203ENST00000471751 ZNF625Q96I27 306 aaPredicted RBP12.44□□□□□ -0.42
SNX4-203ENST00000471751 NDUFA12Q9UI09 145 aa12.44□□□□□ -0.42
SNX4-203ENST00000471751 PAM16Q9Y3D7 125 aa12.44□□□□□ -0.42
SNX4-203ENST00000471751 TRAV16A0A0A6YYK6 109 aaPredicted RBP12.43□□□□□ -0.42
SNX4-203ENST00000471751 COX8AP10176 69 aa12.43□□□□□ -0.42
SNX4-203ENST00000471751 Q8N814 137 aa12.43□□□□□ -0.42
SNX4-203ENST00000471751 CAMK2N2Q96S95 79 aa12.42□□□□□ -0.42
SNX4-203ENST00000471751 PKIGQ9Y2B9 76 aa12.42□□□□□ -0.42
SNX4-203ENST00000471751 SYCNQ0VAF6 134 aa12.41□□□□□ -0.42
SNX4-203ENST00000471751 COX17Q14061 63 aa12.41□□□□□ -0.42
SNX4-203ENST00000471751 HIGD2BQ4VC39 106 aa12.41□□□□□ -0.42
SNX4-203ENST00000471751 BOD1L2Q8IYS8 172 aa12.41□□□□□ -0.42
SNX4-203ENST00000471751 LINC00518Q8N0U6 118 aa12.41□□□□□ -0.42
SNX4-203ENST00000471751 C12orf57Q99622 126 aa12.41□□□□□ -0.42
SNX4-203ENST00000471751 TSPEAR-AS2P59090 65 aa12.4□□□□□ -0.42
SNX4-203ENST00000471751 CDPF1Q6NVV7 123 aa12.4□□□□□ -0.42
SNX4-203ENST00000471751 KRTAP17-1Q9BYP8 105 aa12.4□□□□□ -0.42
SNX4-203ENST00000471751 WFDC2Q14508 124 aa12.39□□□□□ -0.43
SNX4-203ENST00000471751 ZNF815PA8K554 130 aa12.38□□□□□ -0.43
SNX4-203ENST00000471751 CIRBPQ14011 172 aaKnown RBP12.38□□□□□ -0.43
SNX4-203ENST00000471751 LECT2O14960 151 aa12.37□□□□□ -0.43
SNX4-203ENST00000471751 TIMM17BO60830 172 aa12.37□□□□□ -0.43
SNX4-203ENST00000471751 TNP2Q05952 138 aa12.37□□□□□ -0.43
SNX4-203ENST00000471751 SLC25A34Q6PIV7 304 aa12.37□□□□□ -0.43
SNX4-203ENST00000471751 CARD19Q96LW7 228 aa12.37□□□□□ -0.43
SNX4-203ENST00000471751 DNAH2Q9P225 4427 aa12.37□□□□□ -0.43
SNX4-203ENST00000471751 UNQ6190/PRO20217Q6UXQ8 127 aa12.37□□□□□ -0.43
SNX4-203ENST00000471751 PCP2Q8IVA1 136 aa12.37□□□□□ -0.43
SNX4-203ENST00000471751 PGPEP1Q9NXJ5 209 aa12.37□□□□□ -0.43
SNX4-203ENST00000471751 TLX1NBP0CAT3 122 aa12.36□□□□□ -0.43
SNX4-203ENST00000471751 GCSHP23434 173 aa12.36□□□□□ -0.43
SNX4-203ENST00000471751 C2orf82Q6UX34 121 aa12.36□□□□□ -0.43
SNX4-203ENST00000471751 Q6ZRU5 148 aa12.36□□□□□ -0.43
SNX4-203ENST00000471751 SLPIP03973 132 aa12.35□□□□□ -0.43
SNX4-203ENST00000471751 Q6ZVH6 145 aa12.35□□□□□ -0.43
SNX4-203ENST00000471751 C9orf163Q8N9P6 203 aa12.35□□□□□ -0.43
SNX4-203ENST00000471751 UQCR10Q9UDW1 63 aa12.35□□□□□ -0.43
SNX4-203ENST00000471751 DNAH17Q9UFH2 4485 aa12.34□□□□□ -0.43
SNX4-203ENST00000471751 A0A0J9YXY3 114 aa12.34□□□□□ -0.43
SNX4-203ENST00000471751 LINC00526Q96FQ7 95 aa12.34□□□□□ -0.43
SNX4-203ENST00000471751 C14orf144Q96I85 54 aa12.34□□□□□ -0.43
SNX4-203ENST00000471751 HIGD1BQ9P298 99 aa12.34□□□□□ -0.43
SNX4-203ENST00000471751 C6orf48Q9UBA6 75 aa12.34□□□□□ -0.43
SNX4-203ENST00000471751 DNAH10Q8IVF4 4471 aa12.33□□□□□ -0.43
SNX4-203ENST00000471751 SCGB1D4Q6XE38 83 aa12.33□□□□□ -0.44
SNX4-203ENST00000471751 ERG28Q9UKR5 140 aa12.33□□□□□ -0.44
SNX4-203ENST00000471751 C10orf25Q5T742 122 aa12.32□□□□□ -0.44
SNX4-203ENST00000471751 PPDPFQ9H3Y8 114 aa12.32□□□□□ -0.44
SNX4-203ENST00000471751 TMEM238C9JI98 176 aa12.31□□□□□ -0.44
SNX4-203ENST00000471751 NDUFC2-KCTD14E9PQ53 114 aa12.31□□□□□ -0.44
SNX4-203ENST00000471751 TSTD3H0UI37 97 aa12.31□□□□□ -0.44
SNX4-203ENST00000471751 MEIG1Q5JSS6 88 aa12.31□□□□□ -0.44
SNX4-203ENST00000471751 TTTY13Q9BZ97 58 aa12.31□□□□□ -0.44
SNX4-203ENST00000471751 COPS9Q8WXC6 57 aa12.3□□□□□ -0.44
SNX4-203ENST00000471751 MIEN1Q9BRT3 115 aa12.3□□□□□ -0.44
SNX4-203ENST00000471751 IGLV2-33A0A075B6J2 118 aaPredicted RBP12.29□□□□□ -0.44
SNX4-203ENST00000471751 LOC107984640A0A0U1RRK4 108 aa12.29□□□□□ -0.44
SNX4-203ENST00000471751 PTTG1IPP53801 180 aa12.29□□□□□ -0.44
SNX4-203ENST00000471751 SPANXB1Q9NS25 103 aaPredicted RBP12.29□□□□□ -0.44
SNX4-203ENST00000471751 FRAS1Q86XX4 4008 aa12.29□□□□□ -0.44
SNX4-203ENST00000471751 IGLV5-52A0A0A0MRZ9 124 aa12.27□□□□□ -0.45
SNX4-203ENST00000471751 LOC107984156A0A0G2JMH3 177 aa12.27□□□□□ -0.45
SNX4-203ENST00000471751 ARL17AQ8IVW1 177 aa12.27□□□□□ -0.45
SNX4-203ENST00000471751 IFITM1P13164 125 aa12.26□□□□□ -0.45
SNX4-203ENST00000471751 LINC00158P58513 81 aa12.26□□□□□ -0.45
SNX4-203ENST00000471751 SPANXDQ9BXN6 97 aa12.26□□□□□ -0.45
SNX4-203ENST00000471751 SPANXCQ9NY87 97 aa12.26□□□□□ -0.45
SNX4-203ENST00000471751 LINC00474Q9P2X8 69 aa12.26□□□□□ -0.45
SNX4-203ENST00000471751 SMIM13P0DJ93 91 aa12.25□□□□□ -0.45
SNX4-203ENST00000471751 TAL2Q16559 108 aa12.25□□□□□ -0.45
SNX4-203ENST00000471751 LITAFQ99732 161 aa12.25□□□□□ -0.45
SNX4-203ENST00000471751 PFN2P35080 140 aa12.24□□□□□ -0.45
SNX4-203ENST00000471751 SDIM1Q6ZPB5 146 aa12.24□□□□□ -0.45
SNX4-203ENST00000471751 C16orf90A8MZG2 172 aa12.23□□□□□ -0.45
SNX4-203ENST00000471751 C9orf116Q5BN46 136 aaPredicted RBP12.23□□□□□ -0.45
SNX4-203ENST00000471751 TP73-AS1Q9UF72 201 aa12.23□□□□□ -0.45
SNX4-203ENST00000471751 A0A1B0GVY2 172 aa12.22□□□□□ -0.45
SNX4-203ENST00000471751 SRSF9Q13242 221 aaKnown RBP eCLIP12.21□□□□□ -0.45
SNX4-203ENST00000471751 Q6ZRP5 223 aa12.21□□□□□ -0.45
SNX4-203ENST00000471751 C2orf91Q6ZV80 131 aa12.21□□□□□ -0.45
SNX4-203ENST00000471751 MIR7-3HGQ8N6C7 128 aa12.21□□□□□ -0.45
SNX4-203ENST00000471751 FAT2Q9NYQ8 4349 aa12.21□□□□□ -0.45
SNX4-203ENST00000471751 ADAMTSL4-AS1Q5T5F5 129 aa12.2□□□□□ -0.46
SNX4-203ENST00000471751 PRO1933Q9H354 126 aa12.2□□□□□ -0.46
SNX4-203ENST00000471751 HNRNPA3P51991 378 aaKnown RBP12.19□□□□□ -0.46
SNX4-203ENST00000471751 SND1-IT1Q9HBX3 110 aa12.19□□□□□ -0.46
SNX4-203ENST00000471751 KRTAP10-2P60368 255 aa12.18□□□□□ -0.46
SNX4-203ENST00000471751 PLA2G2DQ9UNK4 145 aa12.18□□□□□ -0.46
SNX4-203ENST00000471751 RPL18AQ02543 176 aaKnown RBP12.17□□□□□ -0.46
SNX4-203ENST00000471751 LINC00308Q8TCZ7 52 aa12.17□□□□□ -0.46
SNX4-203ENST00000471751 HIST1H4GQ99525 98 aa12.17□□□□□ -0.46
SNX4-203ENST00000471751 A0A0U1RRA0 63 aa12.15□□□□□ -0.46
SNX4-203ENST00000471751 NDUFC2O95298 119 aa12.15□□□□□ -0.46
SNX4-203ENST00000471751 RPL24P83731 157 aaKnown RBP12.15□□□□□ -0.46
SNX4-203ENST00000471751 HSD52Q0P140 79 aa12.15□□□□□ -0.46
SNX4-203ENST00000471751 GAGE2BQ13066 116 aa12.14□□□□□ -0.47
SNX4-203ENST00000471751 GAGE2EQ4V326 116 aa12.14□□□□□ -0.47
SNX4-203ENST00000471751 GAGE2DQ9UEU5 116 aa12.14□□□□□ -0.47
SNX4-203ENST00000471751 A0A096LNI7 61 aa12.12□□□□□ -0.47
SNX4-203ENST00000471751 DDTP30046 118 aa12.12□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 48.1 ms