RNA–Protein interactions for RNA: ENST00000471188.5

VPS50-210, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 1 (best)

Gene VPS50, Length 3,254 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-210ENST00000471188 Q8N814 137 aa2.98□□□□□ -1.93
VPS50-210ENST00000471188 M0R2N4 97 aa2.98□□□□□ -1.93
VPS50-210ENST00000471188 BCE1O60756 84 aa2.98□□□□□ -1.93
VPS50-210ENST00000471188 GNLYP22749 145 aa2.98□□□□□ -1.93
VPS50-210ENST00000471188 ZNF843Q8N446 348 aa2.98□□□□□ -1.93
VPS50-210ENST00000471188 C5orf56Q8N8D9 126 aa2.98□□□□□ -1.93
VPS50-210ENST00000471188 DYNLRB2Q8TF09 96 aa2.98□□□□□ -1.93
VPS50-210ENST00000471188 MAP1AP78559 2803 aaPredicted RBP2.98□□□□□ -1.93
VPS50-210ENST00000471188 PRYO14603 147 aa2.97□□□□□ -1.93
VPS50-210ENST00000471188 IGFL2Q6UWQ7 119 aa2.97□□□□□ -1.93
VPS50-210ENST00000471188 TRBV6-4A0A1B0GX49 114 aa2.97□□□□□ -1.93
VPS50-210ENST00000471188 BPY2O14599 106 aa2.97□□□□□ -1.93
VPS50-210ENST00000471188 PLA2G1BP04054 148 aaKnown RBP2.97□□□□□ -1.93
VPS50-210ENST00000471188 ZFP36P26651 326 aaKnown RBP2.97□□□□□ -1.93
VPS50-210ENST00000471188 CD164Q04900 197 aa2.97□□□□□ -1.93
VPS50-210ENST00000471188 CELSR1Q9NYQ6 3014 aa2.97□□□□□ -1.93
VPS50-210ENST00000471188 TRBV7-4A0A0J9YYF1 115 aa2.97□□□□□ -1.93
VPS50-210ENST00000471188 TMEM89A2RUT3 159 aa2.97□□□□□ -1.93
VPS50-210ENST00000471188 K7EQG2 157 aa2.97□□□□□ -1.93
VPS50-210ENST00000471188 KHDC1LQ5JSQ8 128 aa2.97□□□□□ -1.93
VPS50-210ENST00000471188 NTM-AS1Q6ZSK4 140 aa2.97□□□□□ -1.93
VPS50-210ENST00000471188 PRR15Q8IV56 129 aa2.97□□□□□ -1.93
VPS50-210ENST00000471188 Q8N9L7 120 aa2.97□□□□□ -1.93
VPS50-210ENST00000471188 BBC3Q96PG8 261 aaPredicted RBP2.97□□□□□ -1.93
VPS50-210ENST00000471188 ZFHX3Q15911 3703 aa2.97□□□□□ -1.93
VPS50-210ENST00000471188 C6orf99Q4VX62 202 aa2.96□□□□□ -1.94
VPS50-210ENST00000471188 BRD3OSQ6XYD6 125 aa2.96□□□□□ -1.94
VPS50-210ENST00000471188 USMG5Q96IX5 58 aa2.96□□□□□ -1.94
VPS50-210ENST00000471188 CDC42SE2Q9NRR3 84 aa2.96□□□□□ -1.94
VPS50-210ENST00000471188 TRGV1A0A0A0MS02 117 aa2.96□□□□□ -1.94
VPS50-210ENST00000471188 A8MTW9 85 aa2.96□□□□□ -1.94
VPS50-210ENST00000471188 KRTAP9-7A8MTY7 169 aa2.96□□□□□ -1.94
VPS50-210ENST00000471188 IBA57-AS1B1ANH7 110 aa2.96□□□□□ -1.94
VPS50-210ENST00000471188 DEFB131AP59861 70 aa2.96□□□□□ -1.94
VPS50-210ENST00000471188 Q6ZQT0 140 aa2.96□□□□□ -1.94
VPS50-210ENST00000471188 LINC01356Q8N9X3 169 aa2.96□□□□□ -1.94
VPS50-210ENST00000471188 HIGD2AQ9BW72 106 aa2.96□□□□□ -1.94
VPS50-210ENST00000471188 PRR4Q16378 134 aa2.95□□□□□ -1.94
VPS50-210ENST00000471188 TLN1Q9Y490 2541 aaKnown RBP2.95□□□□□ -1.94
VPS50-210ENST00000471188 K7EQD1 137 aa2.95□□□□□ -1.94
VPS50-210ENST00000471188 Q6ZRU5 148 aa2.95□□□□□ -1.94
VPS50-210ENST00000471188 SPTSSBQ8NFR3 76 aa2.95□□□□□ -1.94
VPS50-210ENST00000471188 ANKRD11Q6UB99 2663 aaPredicted RBP2.95□□□□□ -1.94
VPS50-210ENST00000471188 NANOS2P60321 138 aaKnown RBP2.95□□□□□ -1.94
VPS50-210ENST00000471188 CXCL6P80162 114 aa2.95□□□□□ -1.94
VPS50-210ENST00000471188 ZNF561-AS1K7EIQ3 104 aa2.94□□□□□ -1.94
VPS50-210ENST00000471188 FAM19A3Q7Z5A8 133 aa2.94□□□□□ -1.94
VPS50-210ENST00000471188 C6orf223Q8N319 242 aa2.94□□□□□ -1.94
VPS50-210ENST00000471188 BSNQ9UPA5 3926 aa2.94□□□□□ -1.94
VPS50-210ENST00000471188 SLURP1P55000 103 aa2.94□□□□□ -1.94
VPS50-210ENST00000471188 Q6ZQY7 126 aa2.94□□□□□ -1.94
VPS50-210ENST00000471188 UBE2E2Q96LR5 201 aa2.94□□□□□ -1.94
VPS50-210ENST00000471188 CELA1Q9UNI1 258 aa2.94□□□□□ -1.94
VPS50-210ENST00000471188 A0A096LNT2 108 aa2.94□□□□□ -1.94
VPS50-210ENST00000471188 H3BUX3 64 aa2.94□□□□□ -1.94
VPS50-210ENST00000471188 KLK9Q2XQG4 91 aa2.94□□□□□ -1.94
VPS50-210ENST00000471188 CR1P17927 2039 aa2.93□□□□□ -1.94
VPS50-210ENST00000471188 K7EMT4 169 aa2.93□□□□□ -1.94
VPS50-210ENST00000471188 CLPSL2Q6UWE3 100 aa2.93□□□□□ -1.94
VPS50-210ENST00000471188 Q6ZRP5 223 aa2.93□□□□□ -1.94
VPS50-210ENST00000471188 SONP18583 2426 aaKnown RBP2.93□□□□□ -1.94
VPS50-210ENST00000471188 Q6ZTC4 211 aa2.93□□□□□ -1.94
VPS50-210ENST00000471188 MUC7Q8TAX7 377 aa2.93□□□□□ -1.94
VPS50-210ENST00000471188 FAM30AQ9NZY2 134 aa2.93□□□□□ -1.94
VPS50-210ENST00000471188 LOC110117498A0A087WWA1 95 aa2.92□□□□□ -1.94
VPS50-210ENST00000471188 A8MUN3 132 aa2.92□□□□□ -1.94
VPS50-210ENST00000471188 LY6G6DO95868 133 aa2.92□□□□□ -1.94
VPS50-210ENST00000471188 PDE6GP18545 87 aa2.92□□□□□ -1.94
VPS50-210ENST00000471188 C11orf44Q8N8P7 122 aa2.92□□□□□ -1.94
VPS50-210ENST00000471188 C1orf64Q8NEQ6 169 aa2.92□□□□□ -1.94
VPS50-210ENST00000471188 SPATA3Q8NHX4 192 aa2.92□□□□□ -1.94
VPS50-210ENST00000471188 LINC01006Q8NI28 216 aa2.92□□□□□ -1.94
VPS50-210ENST00000471188 LINC00167Q96N53 147 aa2.92□□□□□ -1.94
VPS50-210ENST00000471188 IGLV4-60A0A075B6I1 120 aa2.92□□□□□ -1.94
VPS50-210ENST00000471188 TRAV22A0A0B4J277 110 aa2.92□□□□□ -1.94
VPS50-210ENST00000471188 A8MU10 97 aa2.92□□□□□ -1.94
VPS50-210ENST00000471188 CD164L2Q6UWJ8 174 aa2.92□□□□□ -1.94
VPS50-210ENST00000471188 LINC00575Q6W349 94 aa2.92□□□□□ -1.94
VPS50-210ENST00000471188 RBM12B-AS1Q9P1G2 102 aa2.92□□□□□ -1.94
VPS50-210ENST00000471188 FN1P02751 2386 aaKnown RBP2.92□□□□□ -1.94
VPS50-210ENST00000471188 CACNA1AO00555 2505 aa2.92□□□□□ -1.94
VPS50-210ENST00000471188 JMJD1CQ15652 2540 aa2.92□□□□□ -1.94
VPS50-210ENST00000471188 CSMD2Q7Z408 3487 aa2.92□□□□□ -1.94
VPS50-210ENST00000471188 MYO9AB2RTY4 2548 aa2.92□□□□□ -1.94
VPS50-210ENST00000471188 IGHV3OR16-9A0A0B4J2B5 98 aa2.92□□□□□ -1.94
VPS50-210ENST00000471188 LOC100131303A0A0U1RQF7 123 aa2.92□□□□□ -1.94
VPS50-210ENST00000471188 hDV103S1A0JD37 113 aa2.92□□□□□ -1.94
VPS50-210ENST00000471188 C10orf99Q6UWK7 81 aa2.92□□□□□ -1.94
VPS50-210ENST00000471188 C1orf158Q8N1D5 194 aa2.92□□□□□ -1.94
VPS50-210ENST00000471188 Q8NA96 180 aa2.92□□□□□ -1.94
VPS50-210ENST00000471188 ITPR1Q14643 2758 aa2.92□□□□□ -1.94
VPS50-210ENST00000471188 TLN2Q9Y4G6 2542 aa2.92□□□□□ -1.94
VPS50-210ENST00000471188 TRGV2A0A075B6R0 118 aa2.91□□□□□ -1.94
VPS50-210ENST00000471188 BDP1A6H8Y1 2624 aa2.91□□□□□ -1.94
VPS50-210ENST00000471188 CHKB-CPT1BH3BT56 60 aa2.91□□□□□ -1.94
VPS50-210ENST00000471188 INSP01308 110 aa2.91□□□□□ -1.94
VPS50-210ENST00000471188 C9orf116Q5BN46 136 aaPredicted RBP2.91□□□□□ -1.94
VPS50-210ENST00000471188 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP2.91□□□□□ -1.94
VPS50-210ENST00000471188 DEFB124Q8NES8 71 aa2.91□□□□□ -1.94
VPS50-210ENST00000471188 C3orf84H3BNL1 204 aa2.91□□□□□ -1.94
Retrieved 100 of 20,778 RNA–protein pairs in 15.5 ms