RNA–Protein interactions for RNA: ENST00000470687.1

UBXN4-206, Transcript of UBX domain protein 4, humanhuman

TSL 2

Gene UBXN4, Length 549 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBXN4-206ENST00000470687 UBE2L6O14933 153 aa1.51□□□□□ -2.17
UBXN4-206ENST00000470687 SIX6O95475 246 aa1.51□□□□□ -2.17
UBXN4-206ENST00000470687 AKR1C3P42330 323 aa1.51□□□□□ -2.17
UBXN4-206ENST00000470687 CRIP1P50238 77 aa1.51□□□□□ -2.17
UBXN4-206ENST00000470687 RPL37AP61513 92 aaKnown RBP1.51□□□□□ -2.17
UBXN4-206ENST00000470687 CCL20P78556 96 aa1.51□□□□□ -2.17
UBXN4-206ENST00000470687 TMEM241Q24JQ0 296 aa1.51□□□□□ -2.17
UBXN4-206ENST00000470687 SPINK6Q6UWN8 80 aa1.51□□□□□ -2.17
UBXN4-206ENST00000470687 ENHOQ6UWT2 76 aa1.51□□□□□ -2.17
UBXN4-206ENST00000470687 Q6ZQT7 251 aa1.51□□□□□ -2.17
UBXN4-206ENST00000470687 SCXQ7RTU7 201 aa1.51□□□□□ -2.17
UBXN4-206ENST00000470687 Q86TA4 180 aa1.51□□□□□ -2.17
UBXN4-206ENST00000470687 SLC51BQ86UW2 128 aa1.51□□□□□ -2.17
UBXN4-206ENST00000470687 LINC00337Q8N6G1 96 aa1.51□□□□□ -2.17
UBXN4-206ENST00000470687 SFT2D1Q8WV19 159 aa1.51□□□□□ -2.17
UBXN4-206ENST00000470687 BTF3L4Q96K17 158 aa1.51□□□□□ -2.17
UBXN4-206ENST00000470687 AP1S3Q96PC3 154 aa1.51□□□□□ -2.17
UBXN4-206ENST00000470687 DERL1Q9BUN8 251 aa1.51□□□□□ -2.17
UBXN4-206ENST00000470687 MAP1LC3BQ9GZQ8 125 aa1.51□□□□□ -2.17
UBXN4-206ENST00000470687 MANBALQ9NQG1 85 aa1.51□□□□□ -2.17
UBXN4-206ENST00000470687 STARD9Q9P2P6 4700 aa1.51□□□□□ -2.17
UBXN4-206ENST00000470687 DNAH1Q9P2D7 4330 aa1.5□□□□□ -2.17
UBXN4-206ENST00000470687 KANTRA0A1W2PQU2 76 aa1.5□□□□□ -2.17
UBXN4-206ENST00000470687 C1orf196B1AJZ1 125 aa1.5□□□□□ -2.17
UBXN4-206ENST00000470687 TMEM250H0YL14 139 aa1.5□□□□□ -2.17
UBXN4-206ENST00000470687 M0R036 132 aa1.5□□□□□ -2.17
UBXN4-206ENST00000470687 SH2D1AO60880 128 aa1.5□□□□□ -2.17
UBXN4-206ENST00000470687 IFNA1P01562 189 aa1.5□□□□□ -2.17
UBXN4-206ENST00000470687 S100A2P29034 98 aa1.5□□□□□ -2.17
UBXN4-206ENST00000470687 GNG4P50150 75 aa1.5□□□□□ -2.17
UBXN4-206ENST00000470687 FOXA3P55318 350 aaPredicted RBP1.5□□□□□ -2.17
UBXN4-206ENST00000470687 RBX1P62877 108 aa1.5□□□□□ -2.17
UBXN4-206ENST00000470687 GNG5P63218 68 aa1.5□□□□□ -2.17
UBXN4-206ENST00000470687 CTAG1AP78358 180 aa1.5□□□□□ -2.17
UBXN4-206ENST00000470687 SS18Q15532 418 aa1.5□□□□□ -2.17
UBXN4-206ENST00000470687 ZNF56Q15929 161 aa1.5□□□□□ -2.17
UBXN4-206ENST00000470687 RGS21Q2M5E4 152 aa1.5□□□□□ -2.17
UBXN4-206ENST00000470687 CENPWQ5EE01 88 aa1.5□□□□□ -2.17
UBXN4-206ENST00000470687 AMMECR1LQ6DCA0 310 aa1.5□□□□□ -2.17
UBXN4-206ENST00000470687 RPL7L1Q6DKI1 246 aaKnown RBP1.5□□□□□ -2.17
UBXN4-206ENST00000470687 RASL11AQ6T310 242 aa1.5□□□□□ -2.17
UBXN4-206ENST00000470687 LINC00269Q8N2A0 174 aa1.5□□□□□ -2.17
UBXN4-206ENST00000470687 ZNF664Q8N3J9 261 aa1.5□□□□□ -2.17
UBXN4-206ENST00000470687 KCNRGQ8N5I3 272 aa1.5□□□□□ -2.17
UBXN4-206ENST00000470687 C3orf22Q8N5N4 141 aa1.5□□□□□ -2.17
UBXN4-206ENST00000470687 BORCS7Q96B45 105 aa1.5□□□□□ -2.17
UBXN4-206ENST00000470687 PACRGQ96M98 296 aaPredicted RBP1.5□□□□□ -2.17
UBXN4-206ENST00000470687 LINC01600Q96MT4 127 aa1.5□□□□□ -2.17
UBXN4-206ENST00000470687 CNFNQ9BYD5 112 aa1.5□□□□□ -2.17
UBXN4-206ENST00000470687 SND1-IT1Q9HBX3 110 aa1.5□□□□□ -2.17
UBXN4-206ENST00000470687 PLAC8Q9NZF1 115 aa1.5□□□□□ -2.17
UBXN4-206ENST00000470687 RBM12B-AS1Q9P1G2 102 aa1.5□□□□□ -2.17
UBXN4-206ENST00000470687 FLG2Q5D862 2391 aaPredicted RBP1.49□□□□□ -2.17
UBXN4-206ENST00000470687 FXYD6-FXYD2A0A087WZ82 144 aa1.49□□□□□ -2.17
UBXN4-206ENST00000470687 GVQW2A0A096LPI5 108 aaPredicted RBP1.49□□□□□ -2.17
UBXN4-206ENST00000470687 IGHV1-58A0A0C4DH39 117 aa1.49□□□□□ -2.17
UBXN4-206ENST00000470687 TRBV6-5A0A0K0K1A5 114 aa1.49□□□□□ -2.17
UBXN4-206ENST00000470687 GRIFINA4D1Z8 144 aa1.49□□□□□ -2.17
UBXN4-206ENST00000470687 LINC00862A6NCI5 91 aa1.49□□□□□ -2.17
UBXN4-206ENST00000470687 I3L3M4 83 aa1.49□□□□□ -2.17
UBXN4-206ENST00000470687 ARPC5O15511 151 aa1.49□□□□□ -2.17
UBXN4-206ENST00000470687 APOMO95445 188 aa1.49□□□□□ -2.17
UBXN4-206ENST00000470687 IGLC6P0CF74 106 aa1.49□□□□□ -2.17
UBXN4-206ENST00000470687 FGF6P10767 208 aa1.49□□□□□ -2.17
UBXN4-206ENST00000470687 ESDP10768 282 aa1.49□□□□□ -2.17
UBXN4-206ENST00000470687 G0S2P27469 103 aa1.49□□□□□ -2.17
UBXN4-206ENST00000470687 RPL35P42766 123 aaKnown RBP1.49□□□□□ -2.17
UBXN4-206ENST00000470687 KRTAP10-4P60372 401 aaPredicted RBP1.49□□□□□ -2.17
UBXN4-206ENST00000470687 MEF2BQ02080 365 aaPredicted RBP1.49□□□□□ -2.17
UBXN4-206ENST00000470687 BATFQ16520 125 aa1.49□□□□□ -2.17
UBXN4-206ENST00000470687 KRTAP21-2Q3LI59 83 aa1.49□□□□□ -2.17
UBXN4-206ENST00000470687 OR2D3Q8NGH3 330 aa1.49□□□□□ -2.17
UBXN4-206ENST00000470687 IMMP2LQ96T52 175 aa1.49□□□□□ -2.17
UBXN4-206ENST00000470687 SMDT1Q9H4I9 107 aa1.49□□□□□ -2.17
UBXN4-206ENST00000470687 ALG5Q9Y673 324 aa1.49□□□□□ -2.17
UBXN4-206ENST00000470687 KMT2AQ03164 3969 aa1.49□□□□□ -2.17
UBXN4-206ENST00000470687 LYSTQ99698 3801 aa1.48□□□□□ -2.17
UBXN4-206ENST00000470687 TRBV27A0A0K0K1C4 114 aa1.48□□□□□ -2.17
UBXN4-206ENST00000470687 SPRR5A0A1B0GTR4 108 aa1.48□□□□□ -2.17
UBXN4-206ENST00000470687 C19orf71A6NCJ1 209 aa1.48□□□□□ -2.17
UBXN4-206ENST00000470687 LINC01549A6NIU2 74 aa1.48□□□□□ -2.17
UBXN4-206ENST00000470687 K7EMI3 77 aa1.48□□□□□ -2.17
UBXN4-206ENST00000470687 LECT2O14960 151 aa1.48□□□□□ -2.17
UBXN4-206ENST00000470687 PPBPP02775 128 aa1.48□□□□□ -2.17
UBXN4-206ENST00000470687 S100A8P05109 93 aa1.48□□□□□ -2.17
UBXN4-206ENST00000470687 PRB4P10163 310 aaPredicted RBP1.48□□□□□ -2.17
UBXN4-206ENST00000470687 DDTP30046 118 aa1.48□□□□□ -2.17
UBXN4-206ENST00000470687 KRTAP26-1Q6PEX3 210 aa1.48□□□□□ -2.17
UBXN4-206ENST00000470687 FAM19A5Q7Z5A7 132 aaPredicted RBP1.48□□□□□ -2.17
UBXN4-206ENST00000470687 OR5A1Q8NGJ0 315 aa1.48□□□□□ -2.17
UBXN4-206ENST00000470687 OR10AG1Q8NH19 301 aa1.48□□□□□ -2.17
UBXN4-206ENST00000470687 SPACA4Q8TDM5 124 aa1.48□□□□□ -2.17
UBXN4-206ENST00000470687 C20orf78Q9BR46 151 aa1.48□□□□□ -2.17
UBXN4-206ENST00000470687 TIMM21Q9BVV7 248 aa1.48□□□□□ -2.17
UBXN4-206ENST00000470687 MED9Q9NWA0 146 aa1.48□□□□□ -2.17
UBXN4-206ENST00000470687 PSORS1C2Q9UIG4 136 aa1.48□□□□□ -2.17
UBXN4-206ENST00000470687 SACSQ9NZJ4 4579 aa1.47□□□□□ -2.17
UBXN4-206ENST00000470687 TRBV24-1A0A075B6N3 115 aa1.47□□□□□ -2.17
UBXN4-206ENST00000470687 TMSB15BA0A087X1C1 80 aa1.47□□□□□ -2.17
UBXN4-206ENST00000470687 LOC107984640A0A0U1RRK4 108 aa1.47□□□□□ -2.17
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms