RNA–Protein interactions for RNA: ENST00000470537.1

XRN1-208, Transcript of 5'-3' exoribonuclease 1, humanhuman

TSL 2

Gene XRN1, Length 669 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRN1-208ENST00000470537 LINC00304Q8N9R0 145 aa5.17□□□□□ -1.58
XRN1-208ENST00000470537 IGKV2D-26A0A0A0MRZ7 120 aa5.16□□□□□ -1.58
XRN1-208ENST00000470537 A0A1B0GW15 77 aa5.16□□□□□ -1.58
XRN1-208ENST00000470537 B5MCH6 92 aa5.16□□□□□ -1.58
XRN1-208ENST00000470537 SMKR1H3BMG3 65 aa5.16□□□□□ -1.58
XRN1-208ENST00000470537 RPL39P62891 51 aaKnown RBP5.16□□□□□ -1.58
XRN1-208ENST00000470537 FAM229BQ4G0N7 80 aa5.16□□□□□ -1.58
XRN1-208ENST00000470537 MRPL55Q7Z7F7 128 aaKnown RBP5.16□□□□□ -1.58
XRN1-208ENST00000470537 C2orf88Q9BSF0 95 aa5.16□□□□□ -1.58
XRN1-208ENST00000470537 OSTCQ9NRP0 149 aa5.16□□□□□ -1.58
XRN1-208ENST00000470537 S100A8P05109 93 aa5.15□□□□□ -1.59
XRN1-208ENST00000470537 CEBPGP53567 150 aa5.15□□□□□ -1.59
XRN1-208ENST00000470537 FAM104BQ5XKR9 115 aa5.15□□□□□ -1.59
XRN1-208ENST00000470537 C2orf82Q6UX34 121 aa5.15□□□□□ -1.59
XRN1-208ENST00000470537 Q6ZN92 141 aa5.15□□□□□ -1.59
XRN1-208ENST00000470537 SLC51BQ86UW2 128 aa5.15□□□□□ -1.59
XRN1-208ENST00000470537 NAT8BQ9UHF3 227 aa5.15□□□□□ -1.59
XRN1-208ENST00000470537 PYGO1Q9Y3Y4 419 aa5.15□□□□□ -1.59
XRN1-208ENST00000470537 F8W036 122 aa5.14□□□□□ -1.59
XRN1-208ENST00000470537 PPBPP02775 128 aa5.14□□□□□ -1.59
XRN1-208ENST00000470537 UBE2AP49459 152 aa5.14□□□□□ -1.59
XRN1-208ENST00000470537 MRPL51Q4U2R6 128 aaKnown RBP5.14□□□□□ -1.59
XRN1-208ENST00000470537 LINC00242Q5T6M2 205 aa5.14□□□□□ -1.59
XRN1-208ENST00000470537 TEX43Q6ZNM6 134 aa5.14□□□□□ -1.59
XRN1-208ENST00000470537 LINC01551Q86U37 167 aa5.14□□□□□ -1.59
XRN1-208ENST00000470537 LINC00337Q8N6G1 96 aa5.14□□□□□ -1.59
XRN1-208ENST00000470537 SMIM7Q9BQ49 75 aa5.14□□□□□ -1.59
XRN1-208ENST00000470537 SMIM2Q9BVW6 85 aa5.14□□□□□ -1.59
XRN1-208ENST00000470537 SEC11AP67812 179 aa5.13□□□□□ -1.59
XRN1-208ENST00000470537 LCE1AQ5T7P2 110 aa5.13□□□□□ -1.59
XRN1-208ENST00000470537 SPAG11AQ6PDA7 123 aa5.13□□□□□ -1.59
XRN1-208ENST00000470537 Q8IZM0 81 aa5.13□□□□□ -1.59
XRN1-208ENST00000470537 TMEM141Q96I45 108 aa5.13□□□□□ -1.59
XRN1-208ENST00000470537 RETNLBQ9BQ08 111 aa5.13□□□□□ -1.59
XRN1-208ENST00000470537 ALKBH7Q9BT30 221 aaPredicted RBP5.13□□□□□ -1.59
XRN1-208ENST00000470537 PPDPFQ9H3Y8 114 aa5.13□□□□□ -1.59
XRN1-208ENST00000470537 TOMM7Q9P0U1 55 aa5.13□□□□□ -1.59
XRN1-208ENST00000470537 FSIP2Q5CZC0 6907 aa5.12□□□□□ -1.59
XRN1-208ENST00000470537 LINC00469Q8N7U9 141 aa5.12□□□□□ -1.59
XRN1-208ENST00000470537 EIF5A2Q9GZV4 153 aaKnown RBP5.12□□□□□ -1.59
XRN1-208ENST00000470537 VCX2Q9H322 139 aa5.12□□□□□ -1.59
XRN1-208ENST00000470537 XAGE1AQ9HD64 81 aa5.12□□□□□ -1.59
XRN1-208ENST00000470537 CRCT1Q9UGL9 99 aa5.12□□□□□ -1.59
XRN1-208ENST00000470537 F8VRH5 84 aa5.11□□□□□ -1.59
XRN1-208ENST00000470537 CXCL5P42830 114 aa5.11□□□□□ -1.59
XRN1-208ENST00000470537 PAPPA-AS1Q5QFB9 102 aa5.11□□□□□ -1.59
XRN1-208ENST00000470537 FP248Q71RG6 208 aaPredicted RBP5.11□□□□□ -1.59
XRN1-208ENST00000470537 FAM104AQ969W3 186 aa5.11□□□□□ -1.59
XRN1-208ENST00000470537 IGLV4-3A0A075B6K6 122 aa5.1□□□□□ -1.59
XRN1-208ENST00000470537 NPSP0C0P6 89 aa5.1□□□□□ -1.59
XRN1-208ENST00000470537 G0S2P27469 103 aa5.1□□□□□ -1.59
XRN1-208ENST00000470537 FAM74A3Q4VXF1 159 aa5.1□□□□□ -1.59
XRN1-208ENST00000470537 NKAPP1Q8N9T2 125 aa5.1□□□□□ -1.59
XRN1-208ENST00000470537 LINC00167Q96N53 147 aa5.1□□□□□ -1.59
XRN1-208ENST00000470537 V9GYV3 84 aa5.1□□□□□ -1.59
XRN1-208ENST00000470537 A0A1B0GVG6 124 aa5.09□□□□□ -1.59
XRN1-208ENST00000470537 RPL37AP8A6NKH3 93 aa5.09□□□□□ -1.59
XRN1-208ENST00000470537 D6R8Y8 96 aa5.09□□□□□ -1.59
XRN1-208ENST00000470537 SEC61BP60468 96 aaKnown RBP5.09□□□□□ -1.59
XRN1-208ENST00000470537 HERVK_113P63121 156 aa5.09□□□□□ -1.59
XRN1-208ENST00000470537 KRTAP13-2Q52LG2 175 aa5.09□□□□□ -1.59
XRN1-208ENST00000470537 ORMDL3Q8N138 153 aa5.09□□□□□ -1.59
XRN1-208ENST00000470537 ANAPC11Q9NYG5 84 aa5.09□□□□□ -1.59
XRN1-208ENST00000470537 SMIM27A0A1W2PRY6 76 aa5.08□□□□□ -1.6
XRN1-208ENST00000470537 ASB16-AS1Q495Z4 193 aa5.08□□□□□ -1.6
XRN1-208ENST00000470537 GNB1LQ9BYB4 327 aa5.08□□□□□ -1.6
XRN1-208ENST00000470537 GEMIN7Q9H840 131 aaKnown RBP5.08□□□□□ -1.6
XRN1-208ENST00000470537 CYSLTR1Q9Y271 337 aa5.08□□□□□ -1.6
XRN1-208ENST00000470537 K7EMI3 77 aa5.07□□□□□ -1.6
XRN1-208ENST00000470537 NPYP01303 97 aa5.07□□□□□ -1.6
XRN1-208ENST00000470537 TMEM136Q6ZRR5 245 aa5.07□□□□□ -1.6
XRN1-208ENST00000470537 Q8N9P0 234 aaPredicted RBP5.07□□□□□ -1.6
XRN1-208ENST00000470537 LAMTOR2Q9Y2Q5 125 aa5.07□□□□□ -1.6
XRN1-208ENST00000470537 GAGE10A6NGK3 116 aa5.06□□□□□ -1.6
XRN1-208ENST00000470537 PNRC1Q12796 327 aaPredicted RBP5.06□□□□□ -1.6
XRN1-208ENST00000470537 ORMDL2Q53FV1 153 aa5.06□□□□□ -1.6
XRN1-208ENST00000470537 C2orf66Q6UXQ4 117 aa5.06□□□□□ -1.6
XRN1-208ENST00000470537 FAM19A3Q7Z5A8 133 aa5.06□□□□□ -1.6
XRN1-208ENST00000470537 KRTAP13-1Q8IUC0 172 aa5.06□□□□□ -1.6
XRN1-208ENST00000470537 PRELID3AQ96N28 172 aa5.06□□□□□ -1.6
XRN1-208ENST00000470537 AMELXQ99217 191 aa5.06□□□□□ -1.6
XRN1-208ENST00000470537 IGLV5-37A0A075B6J1 123 aa5.05□□□□□ -1.6
XRN1-208ENST00000470537 ADIRFQ15847 76 aa5.05□□□□□ -1.6
XRN1-208ENST00000470537 TCTE3Q8IZS6 198 aa5.05□□□□□ -1.6
XRN1-208ENST00000470537 MAP1LC3AQ9H492 121 aa5.05□□□□□ -1.6
XRN1-208ENST00000470537 NDUFA12Q9UI09 145 aa5.05□□□□□ -1.6
XRN1-208ENST00000470537 SRP19P09132 144 aaKnown RBP5.04□□□□□ -1.6
XRN1-208ENST00000470537 MRPL54Q6P161 138 aaKnown RBP5.04□□□□□ -1.6
XRN1-208ENST00000470537 ALKAL2Q6UX46 152 aa5.04□□□□□ -1.6
XRN1-208ENST00000470537 FAM19A1Q7Z5A9 133 aa5.04□□□□□ -1.6
XRN1-208ENST00000470537 CDKN2A-AS1Q9UH64 79 aa5.04□□□□□ -1.6
XRN1-208ENST00000470537 NAT8Q9UHE5 227 aa5.04□□□□□ -1.6
XRN1-208ENST00000470537 LOC389332A0A1B0GUA5 103 aa5.03□□□□□ -1.6
XRN1-208ENST00000470537 KRTAP10-7P60409 375 aaPredicted RBP5.03□□□□□ -1.6
XRN1-208ENST00000470537 RPL23P62829 140 aaKnown RBP5.03□□□□□ -1.6
XRN1-208ENST00000470537 RPL24P83731 157 aaKnown RBP5.03□□□□□ -1.6
XRN1-208ENST00000470537 PDZD11Q5EBL8 140 aa5.03□□□□□ -1.6
XRN1-208ENST00000470537 ATP5L2Q7Z4Y8 100 aa5.03□□□□□ -1.6
XRN1-208ENST00000470537 CBLN2Q8IUK8 224 aa5.03□□□□□ -1.6
XRN1-208ENST00000470537 PLEKHB2Q96CS7 222 aa5.03□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms