RNA–Protein interactions for RNA: ENST00000470285.1

GCFC2-206, Transcript of GC-rich sequence DNA-binding factor 2, humanhuman

TSL 5

Gene GCFC2, Length 423 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GCFC2-206ENST00000470285 LLPHQ9BRT6 129 aaKnown RBP-0.33□□□□□ -2.46
GCFC2-206ENST00000470285 SNRNP25Q9BV90 132 aaKnown RBP-0.33□□□□□ -2.46
GCFC2-206ENST00000470285 TMEM191AQ9H0A3 160 aa-0.33□□□□□ -2.46
GCFC2-206ENST00000470285 NXT2Q9NPJ8 142 aaKnown RBP-0.33□□□□□ -2.46
GCFC2-206ENST00000470285 GSKIPQ9P0R6 139 aa-0.33□□□□□ -2.46
GCFC2-206ENST00000470285 GINS2Q9Y248 185 aa-0.33□□□□□ -2.46
GCFC2-206ENST00000470285 HSPB11Q9Y547 144 aa-0.33□□□□□ -2.46
GCFC2-206ENST00000470285 LINC01558Q9Y6Z2 57 aa-0.33□□□□□ -2.46
GCFC2-206ENST00000470285 CSMD2Q7Z408 3487 aa-0.33□□□□□ -2.46
GCFC2-206ENST00000470285 ABCC5O15440 1437 aa-0.33□□□□□ -2.46
GCFC2-206ENST00000470285 ABCA13Q86UQ4 5058 aa-0.33□□□□□ -2.46
GCFC2-206ENST00000470285 SACSQ9NZJ4 4579 aa-0.33□□□□□ -2.46
GCFC2-206ENST00000470285 CMYA5Q8N3K9 4069 aa-0.33□□□□□ -2.46
GCFC2-206ENST00000470285 BOD1L1Q8NFC6 3051 aa-0.33□□□□□ -2.46
GCFC2-206ENST00000470285 LRRC37AA6NMS7 1700 aa-0.33□□□□□ -2.46
GCFC2-206ENST00000470285 CSMD1Q96PZ7 3565 aa-0.34□□□□□ -2.46
GCFC2-206ENST00000470285 ZNF236Q9UL36 1845 aa-0.34□□□□□ -2.46
GCFC2-206ENST00000470285 NKTRP30414 1462 aaKnown RBP-0.34□□□□□ -2.46
GCFC2-206ENST00000470285 ABCC10Q5T3U5 1492 aa-0.34□□□□□ -2.46
GCFC2-206ENST00000470285 ALKQ9UM73 1620 aa-0.34□□□□□ -2.46
GCFC2-206ENST00000470285 ANKRD36A6QL64 1941 aa-0.34□□□□□ -2.46
GCFC2-206ENST00000470285 DNAH1Q9P2D7 4330 aa-0.34□□□□□ -2.46
GCFC2-206ENST00000470285 TRAV36DV7A0A075B6V5 113 aa-0.34□□□□□ -2.46
GCFC2-206ENST00000470285 OVOS2A0A0J9YW53 1432 aa-0.34□□□□□ -2.46
GCFC2-206ENST00000470285 A0A1B0GU69 56 aa-0.34□□□□□ -2.46
GCFC2-206ENST00000470285 A0A1B0GV72 72 aa-0.34□□□□□ -2.46
GCFC2-206ENST00000470285 A0A1B0GX51 115 aa-0.34□□□□□ -2.46
GCFC2-206ENST00000470285 DISP2A7MBM2 1401 aa-0.34□□□□□ -2.46
GCFC2-206ENST00000470285 E5RI56 91 aa-0.34□□□□□ -2.46
GCFC2-206ENST00000470285 TSTD3H0UI37 97 aa-0.34□□□□□ -2.46
GCFC2-206ENST00000470285 HMGN4O00479 90 aa-0.34□□□□□ -2.46
GCFC2-206ENST00000470285 MT-ND4LP03901 98 aa-0.34□□□□□ -2.46
GCFC2-206ENST00000470285 COX6CP09669 75 aa-0.34□□□□□ -2.46
GCFC2-206ENST00000470285 CTXN2P0C2S0 81 aa-0.34□□□□□ -2.46
GCFC2-206ENST00000470285 RPL38P63173 70 aaKnown RBP-0.34□□□□□ -2.46
GCFC2-206ENST00000470285 TFAMQ00059 246 aaKnown RBP-0.34□□□□□ -2.46
GCFC2-206ENST00000470285 ATMQ13315 3056 aa-0.34□□□□□ -2.46
GCFC2-206ENST00000470285 TMEM128Q5BJH2 165 aa-0.34□□□□□ -2.46
GCFC2-206ENST00000470285 S100A7L2Q5SY68 101 aa-0.34□□□□□ -2.46
GCFC2-206ENST00000470285 TMEM244Q5VVB8 128 aa-0.34□□□□□ -2.46
GCFC2-206ENST00000470285 MIC13Q5XKP0 118 aa-0.34□□□□□ -2.46
GCFC2-206ENST00000470285 OVOS2Q6IE36 1432 aa-0.34□□□□□ -2.46
GCFC2-206ENST00000470285 EDC4Q6P2E9 1401 aaKnown RBP-0.34□□□□□ -2.46
GCFC2-206ENST00000470285 COX6B2Q6YFQ2 88 aa-0.34□□□□□ -2.46
GCFC2-206ENST00000470285 C5orf38Q86SI9 138 aa-0.34□□□□□ -2.46
GCFC2-206ENST00000470285 WFDC13Q8IUB5 93 aa-0.34□□□□□ -2.46
GCFC2-206ENST00000470285 XRN1Q8IZH2 1706 aaKnown RBP-0.34□□□□□ -2.46
GCFC2-206ENST00000470285 KCNRGQ8N5I3 272 aa-0.34□□□□□ -2.46
GCFC2-206ENST00000470285 C1orf54Q8WWF1 131 aa-0.34□□□□□ -2.46
GCFC2-206ENST00000470285 PRG4Q92954 1404 aaPredicted RBP-0.34□□□□□ -2.46
GCFC2-206ENST00000470285 CDK5RAP2Q96SN8 1893 aa-0.34□□□□□ -2.46
GCFC2-206ENST00000470285 MRPL34Q9BQ48 92 aaKnown RBP-0.34□□□□□ -2.46
GCFC2-206ENST00000470285 VAMP8Q9BV40 100 aa-0.34□□□□□ -2.46
GCFC2-206ENST00000470285 S4R3F8 94 aa-0.34□□□□□ -2.46
GCFC2-206ENST00000470285 RIMS1Q86UR5 1692 aaKnown RBP-0.34□□□□□ -2.46
GCFC2-206ENST00000470285 MAPKBP1O60336 1514 aa-0.34□□□□□ -2.46
GCFC2-206ENST00000470285 MUC22E2RYF6 1773 aaPredicted RBP-0.34□□□□□ -2.46
GCFC2-206ENST00000470285 BCORQ6W2J9 1755 aa-0.34□□□□□ -2.46
GCFC2-206ENST00000470285 C1orf167Q5SNV9 1468 aa-0.35□□□□□ -2.46
GCFC2-206ENST00000470285 KIAA1551Q9HCM1 1747 aa-0.35□□□□□ -2.47
GCFC2-206ENST00000470285 MARF1Q9Y4F3 1742 aaKnown RBP-0.35□□□□□ -2.47
GCFC2-206ENST00000470285 TRIOO75962 3097 aa-0.35□□□□□ -2.47
GCFC2-206ENST00000470285 SMG6Q86US8 1419 aaKnown RBP-0.35□□□□□ -2.47
GCFC2-206ENST00000470285 BTAF1O14981 1849 aa-0.35□□□□□ -2.47
GCFC2-206ENST00000470285 KIF20BQ96Q89 1820 aa-0.35□□□□□ -2.47
GCFC2-206ENST00000470285 SPEF2Q9C093 1822 aa-0.35□□□□□ -2.47
GCFC2-206ENST00000470285 A0A087WVE0 104 aa-0.35□□□□□ -2.47
GCFC2-206ENST00000470285 LOC100130705A0A1B0GUX0 176 aa-0.35□□□□□ -2.47
GCFC2-206ENST00000470285 F6UZH7 168 aa-0.35□□□□□ -2.47
GCFC2-206ENST00000470285 H3BQF6 201 aa-0.35□□□□□ -2.47
GCFC2-206ENST00000470285 M0R2Z0 102 aa-0.35□□□□□ -2.47
GCFC2-206ENST00000470285 TNFSF15O95150 251 aa-0.35□□□□□ -2.47
GCFC2-206ENST00000470285 IGLC1P0CG04 106 aa-0.35□□□□□ -2.47
GCFC2-206ENST00000470285 TRAPPC2P0DI81 140 aa-0.35□□□□□ -2.47
GCFC2-206ENST00000470285 TRAPPC2BP0DI82 140 aa-0.35□□□□□ -2.47
GCFC2-206ENST00000470285 SCGB1A1P11684 91 aa-0.35□□□□□ -2.47
GCFC2-206ENST00000470285 GNGT1P63211 74 aa-0.35□□□□□ -2.47
GCFC2-206ENST00000470285 MT1XP80297 61 aa-0.35□□□□□ -2.47
GCFC2-206ENST00000470285 SMCO1Q147U7 214 aa-0.35□□□□□ -2.47
GCFC2-206ENST00000470285 SMIM21Q3B7S5 101 aa-0.35□□□□□ -2.47
GCFC2-206ENST00000470285 Q56UQ5 140 aa-0.35□□□□□ -2.47
GCFC2-206ENST00000470285 SFTA2Q6UW10 78 aa-0.35□□□□□ -2.47
GCFC2-206ENST00000470285 CLPSL2Q6UWE3 100 aa-0.35□□□□□ -2.47
GCFC2-206ENST00000470285 C6orf201Q7Z4U5 140 aa-0.35□□□□□ -2.47
GCFC2-206ENST00000470285 C8orf59Q8N0T1 100 aaPredicted RBP-0.35□□□□□ -2.47
GCFC2-206ENST00000470285 PPP3R2Q96LZ3 170 aa-0.35□□□□□ -2.47
GCFC2-206ENST00000470285 PFDN5Q99471 154 aa-0.35□□□□□ -2.47
GCFC2-206ENST00000470285 C12orf57Q99622 126 aa-0.35□□□□□ -2.47
GCFC2-206ENST00000470285 PCBD2Q9H0N5 130 aa-0.35□□□□□ -2.47
GCFC2-206ENST00000470285 CENPHQ9H3R5 247 aa-0.35□□□□□ -2.47
GCFC2-206ENST00000470285 LINC00846Q9NV44 126 aa-0.35□□□□□ -2.47
GCFC2-206ENST00000470285 GID8Q9NWU2 228 aa-0.35□□□□□ -2.47
GCFC2-206ENST00000470285 CCDC167Q9P0B6 97 aa-0.35□□□□□ -2.47
GCFC2-206ENST00000470285 SMPXQ9UHP9 88 aa-0.35□□□□□ -2.47
GCFC2-206ENST00000470285 HIGD1AQ9Y241 93 aa-0.35□□□□□ -2.47
GCFC2-206ENST00000470285 UBE2D4Q9Y2X8 147 aa-0.35□□□□□ -2.47
GCFC2-206ENST00000470285 AP4S1Q9Y587 144 aa-0.35□□□□□ -2.47
GCFC2-206ENST00000470285 ARL2-SNX15V9GYD0 113 aa-0.35□□□□□ -2.47
GCFC2-206ENST00000470285 RGPD2P0DJD1 1756 aa-0.35□□□□□ -2.47
GCFC2-206ENST00000470285 CEP250Q9BV73 2442 aa-0.35□□□□□ -2.47
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms