RNA–Protein interactions for RNA: ENST00000467717.5

VARS2-204, Transcript of valyl-tRNA synthetase 2, mitochondrial, humanhuman

TSL 3

Gene VARS2, Length 863 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS2-204ENST00000467717 CAMK2N2Q96S95 79 aa11.09□□□□□ -0.63
VARS2-204ENST00000467717 SYCNQ0VAF6 134 aa11.08□□□□□ -0.64
VARS2-204ENST00000467717 C16orf90A8MZG2 172 aa11.07□□□□□ -0.64
VARS2-204ENST00000467717 NDUFA1O15239 70 aa11.07□□□□□ -0.64
VARS2-204ENST00000467717 C9orf163Q8N9P6 203 aa11.07□□□□□ -0.64
VARS2-204ENST00000467717 COX7B2Q8TF08 81 aa11.07□□□□□ -0.64
VARS2-204ENST00000467717 CARD19Q96LW7 228 aa11.07□□□□□ -0.64
VARS2-204ENST00000467717 ABCA13Q86UQ4 5058 aa11.06□□□□□ -0.64
VARS2-204ENST00000467717 GCSHP23434 173 aa11.06□□□□□ -0.64
VARS2-204ENST00000467717 AKR1D1P51857 326 aa11.06□□□□□ -0.64
VARS2-204ENST00000467717 CKS1BP61024 79 aa11.06□□□□□ -0.64
VARS2-204ENST00000467717 CXCL5P42830 114 aa11.05□□□□□ -0.64
VARS2-204ENST00000467717 Q6ZRU5 148 aa11.05□□□□□ -0.64
VARS2-204ENST00000467717 HERVK_113P61574 105 aa11.04□□□□□ -0.64
VARS2-204ENST00000467717 C2orf82Q6UX34 121 aa11.04□□□□□ -0.64
VARS2-204ENST00000467717 UNQ6190/PRO20217Q6UXQ8 127 aa11.04□□□□□ -0.64
VARS2-204ENST00000467717 APOBP04114 4563 aaKnown RBP11.04□□□□□ -0.64
VARS2-204ENST00000467717 LINC01620Q4KN68 170 aa11.03□□□□□ -0.64
VARS2-204ENST00000467717 C10orf25Q5T742 122 aa11.03□□□□□ -0.64
VARS2-204ENST00000467717 TRBV30A0A0K0K1B3 111 aa11.02□□□□□ -0.65
VARS2-204ENST00000467717 RNF151Q2KHN1 245 aa11.02□□□□□ -0.65
VARS2-204ENST00000467717 C6orf48Q9UBA6 75 aa11.01□□□□□ -0.65
VARS2-204ENST00000467717 KRTAP10-1P60331 282 aa11□□□□□ -0.65
VARS2-204ENST00000467717 SFTA2Q6UW10 78 aa11□□□□□ -0.65
VARS2-204ENST00000467717 SDIM1Q6ZPB5 146 aa11□□□□□ -0.65
VARS2-204ENST00000467717 STPG4Q8N801 248 aa11□□□□□ -0.65
VARS2-204ENST00000467717 PLEKHB2Q96CS7 222 aa11□□□□□ -0.65
VARS2-204ENST00000467717 PKIGQ9Y2B9 76 aa11□□□□□ -0.65
VARS2-204ENST00000467717 LEPROTO15243 131 aa10.99□□□□□ -0.65
VARS2-204ENST00000467717 SCGB1D1O95968 90 aa10.99□□□□□ -0.65
VARS2-204ENST00000467717 E9PLD3 99 aa10.98□□□□□ -0.65
VARS2-204ENST00000467717 ATOH7Q8N100 152 aa10.98□□□□□ -0.65
VARS2-204ENST00000467717 LOC107984640A0A0U1RRK4 108 aa10.96□□□□□ -0.65
VARS2-204ENST00000467717 J3QQQ9 107 aa10.96□□□□□ -0.65
VARS2-204ENST00000467717 ZNF625Q96I27 306 aaPredicted RBP10.96□□□□□ -0.65
VARS2-204ENST00000467717 TLX1NBP0CAT3 122 aa10.95□□□□□ -0.66
VARS2-204ENST00000467717 LGALS3P17931 250 aaKnown RBP10.95□□□□□ -0.66
VARS2-204ENST00000467717 TSPEAR-AS2P59090 65 aa10.95□□□□□ -0.66
VARS2-204ENST00000467717 C9orf116Q5BN46 136 aaPredicted RBP10.95□□□□□ -0.66
VARS2-204ENST00000467717 NDUFA12Q9UI09 145 aa10.95□□□□□ -0.66
VARS2-204ENST00000467717 MYMXA0A1B0GTQ4 84 aa10.93□□□□□ -0.66
VARS2-204ENST00000467717 NDUFC2-KCTD14E9PQ53 114 aa10.93□□□□□ -0.66
VARS2-204ENST00000467717 NMUP48645 174 aa10.93□□□□□ -0.66
VARS2-204ENST00000467717 JOSD1Q15040 202 aaPredicted RBP10.93□□□□□ -0.66
VARS2-204ENST00000467717 HSBP1L1C9JCN9 74 aa10.92□□□□□ -0.66
VARS2-204ENST00000467717 HERV-K104P63124 156 aa10.92□□□□□ -0.66
VARS2-204ENST00000467717 RPL18AQ02543 176 aaKnown RBP10.92□□□□□ -0.66
VARS2-204ENST00000467717 GAGE2BQ13066 116 aa10.92□□□□□ -0.66
VARS2-204ENST00000467717 ANKRD39Q53RE8 183 aa10.92□□□□□ -0.66
VARS2-204ENST00000467717 Q6ZSA8 131 aa10.92□□□□□ -0.66
VARS2-204ENST00000467717 FAM30AQ9NZY2 134 aa10.92□□□□□ -0.66
VARS2-204ENST00000467717 LINC00474Q9P2X8 69 aa10.92□□□□□ -0.66
VARS2-204ENST00000467717 A0A096LNI7 61 aa10.91□□□□□ -0.66
VARS2-204ENST00000467717 IGKV2D-26A0A0A0MRZ7 120 aa10.91□□□□□ -0.66
VARS2-204ENST00000467717 IGKV2-24A0A0C4DH68 120 aa10.91□□□□□ -0.66
VARS2-204ENST00000467717 PTTG1IPP53801 180 aa10.91□□□□□ -0.66
VARS2-204ENST00000467717 Q6ZRP5 223 aa10.91□□□□□ -0.66
VARS2-204ENST00000467717 CHTF8P0CG12 524 aa10.9□□□□□ -0.66
VARS2-204ENST00000467717 MAJINQ3KP22 176 aa10.9□□□□□ -0.66
VARS2-204ENST00000467717 KRTAP4-5Q9BYR2 181 aa10.9□□□□□ -0.66
VARS2-204ENST00000467717 ERG28Q9UKR5 140 aa10.9□□□□□ -0.66
VARS2-204ENST00000467717 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP10.9□□□□□ -0.66
VARS2-204ENST00000467717 HSPG2P98160 4391 aa10.9□□□□□ -0.67
VARS2-204ENST00000467717 PANO1I0J062 215 aa10.89□□□□□ -0.67
VARS2-204ENST00000467717 CIRBPQ14011 172 aaKnown RBP10.89□□□□□ -0.67
VARS2-204ENST00000467717 COX17Q14061 63 aa10.89□□□□□ -0.67
VARS2-204ENST00000467717 GAGE2EQ4V326 116 aa10.89□□□□□ -0.67
VARS2-204ENST00000467717 GAGE2DQ9UEU5 116 aa10.89□□□□□ -0.67
VARS2-204ENST00000467717 LINC00587B1AMM8 73 aa10.88□□□□□ -0.67
VARS2-204ENST00000467717 PFN2P35080 140 aa10.88□□□□□ -0.67
VARS2-204ENST00000467717 MEIG1Q5JSS6 88 aa10.88□□□□□ -0.67
VARS2-204ENST00000467717 SPACA4Q8TDM5 124 aa10.88□□□□□ -0.67
VARS2-204ENST00000467717 DPH3Q96FX2 82 aa10.88□□□□□ -0.67
VARS2-204ENST00000467717 FAT1Q14517 4588 aa10.86□□□□□ -0.67
VARS2-204ENST00000467717 PYY3Q5JQD4 70 aa10.86□□□□□ -0.67
VARS2-204ENST00000467717 ZNF815PA8K554 130 aa10.85□□□□□ -0.67
VARS2-204ENST00000467717 CDK2AP2O75956 126 aa10.85□□□□□ -0.67
VARS2-204ENST00000467717 LINC00158P58513 81 aa10.85□□□□□ -0.67
VARS2-204ENST00000467717 TTTY13Q9BZ97 58 aa10.85□□□□□ -0.67
VARS2-204ENST00000467717 A0A0J9YXY3 114 aa10.84□□□□□ -0.67
VARS2-204ENST00000467717 SMIM13P0DJ93 91 aa10.84□□□□□ -0.67
VARS2-204ENST00000467717 XGP55808 180 aa10.84□□□□□ -0.67
VARS2-204ENST00000467717 SCXQ7RTU7 201 aa10.84□□□□□ -0.67
VARS2-204ENST00000467717 A0A087WYN8 130 aa10.83□□□□□ -0.68
VARS2-204ENST00000467717 A0A0U1RRA0 63 aa10.83□□□□□ -0.68
VARS2-204ENST00000467717 PCP2Q8IVA1 136 aa10.83□□□□□ -0.68
VARS2-204ENST00000467717 CIRBP-AS1Q8TBR5 109 aa10.83□□□□□ -0.68
VARS2-204ENST00000467717 XAGE1AQ9HD64 81 aa10.83□□□□□ -0.68
VARS2-204ENST00000467717 HAMPP81172 84 aa10.82□□□□□ -0.68
VARS2-204ENST00000467717 C9orf129Q5T035 196 aaKnown RBP10.82□□□□□ -0.68
VARS2-204ENST00000467717 VAMP8Q9BV40 100 aa10.82□□□□□ -0.68
VARS2-204ENST00000467717 PLAC8Q9NZF1 115 aa10.82□□□□□ -0.68
VARS2-204ENST00000467717 SND1-IT1Q9HBX3 110 aa10.81□□□□□ -0.68
VARS2-204ENST00000467717 MIR7-3HGQ8N6C7 128 aa10.8□□□□□ -0.68
VARS2-204ENST00000467717 PAM16Q9Y3D7 125 aa10.8□□□□□ -0.68
VARS2-204ENST00000467717 A0A1W2PNN7 141 aa10.79□□□□□ -0.68
VARS2-204ENST00000467717 SPATA45Q537H7 98 aa10.79□□□□□ -0.68
VARS2-204ENST00000467717 SCGB1D4Q6XE38 83 aa10.79□□□□□ -0.68
VARS2-204ENST00000467717 FAM168BA1KXE4 195 aa10.78□□□□□ -0.68
VARS2-204ENST00000467717 TIMM17BO60830 172 aa10.78□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 160.7 ms