RNA–Protein interactions for RNA: ENST00000467574.5

PDCD4-205, Transcript of programmed cell death 4, humanhuman

TSL 3

Gene PDCD4, Length 735 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDCD4-205ENST00000467574 SERF1AO75920 110 aa16.38■□□□□ 0.21
PDCD4-205ENST00000467574 NDUFA6P56556 154 aa16.38■□□□□ 0.21
PDCD4-205ENST00000467574 GAGE2BQ13066 116 aa16.38■□□□□ 0.21
PDCD4-205ENST00000467574 STPG4Q8N801 248 aa16.38■□□□□ 0.21
PDCD4-205ENST00000467574 TOMM7Q9P0U1 55 aa16.38■□□□□ 0.21
PDCD4-205ENST00000467574 HSBP1O75506 76 aa16.37■□□□□ 0.21
PDCD4-205ENST00000467574 FAM19A2Q8N3H0 131 aa16.37■□□□□ 0.21
PDCD4-205ENST00000467574 TRBV30A0A0K0K1B3 111 aa16.36■□□□□ 0.21
PDCD4-205ENST00000467574 TLX1NBP0CAT3 122 aa16.36■□□□□ 0.21
PDCD4-205ENST00000467574 RPL18AQ02543 176 aaKnown RBP16.36■□□□□ 0.21
PDCD4-205ENST00000467574 PRSS2P07478 247 aa16.35■□□□□ 0.21
PDCD4-205ENST00000467574 INAFM2P0DMQ5 153 aa16.35■□□□□ 0.21
PDCD4-205ENST00000467574 SPINK8P0C7L1 97 aa16.34■□□□□ 0.21
PDCD4-205ENST00000467574 IFI27L1Q96BM0 104 aa16.34■□□□□ 0.21
PDCD4-205ENST00000467574 NUPR1O60356 82 aa16.33■□□□□ 0.2
PDCD4-205ENST00000467574 ZNF22P17026 224 aaPredicted RBP16.33■□□□□ 0.2
PDCD4-205ENST00000467574 C6orf226Q5I0X4 101 aa16.33■□□□□ 0.2
PDCD4-205ENST00000467574 Q6ZRP5 223 aa16.33■□□□□ 0.2
PDCD4-205ENST00000467574 C11orf86A6NJI1 115 aa16.31■□□□□ 0.2
PDCD4-205ENST00000467574 CKS1BP61024 79 aa16.31■□□□□ 0.2
PDCD4-205ENST00000467574 RPL37AP61513 92 aaKnown RBP16.31■□□□□ 0.2
PDCD4-205ENST00000467574 C9orf116Q5BN46 136 aaPredicted RBP16.31■□□□□ 0.2
PDCD4-205ENST00000467574 TRAV12-1A0A0B4J245 112 aa16.3■□□□□ 0.2
PDCD4-205ENST00000467574 COX7B2Q8TF08 81 aa16.3■□□□□ 0.2
PDCD4-205ENST00000467574 IGLV5-39A0A0G2JS06 123 aa16.29■□□□□ 0.2
PDCD4-205ENST00000467574 A0A1W2PNN7 141 aa16.29■□□□□ 0.2
PDCD4-205ENST00000467574 H3BRM9 83 aa16.29■□□□□ 0.2
PDCD4-205ENST00000467574 HIST1H2BKO60814 126 aa16.28■□□□□ 0.2
PDCD4-205ENST00000467574 HIST1H2BJP06899 126 aa16.28■□□□□ 0.2
PDCD4-205ENST00000467574 HIST1H2BOP23527 126 aa16.28■□□□□ 0.2
PDCD4-205ENST00000467574 HIST1H2BBP33778 126 aa16.28■□□□□ 0.2
PDCD4-205ENST00000467574 CXCL5P42830 114 aa16.28■□□□□ 0.2
PDCD4-205ENST00000467574 HIST1H2BDP58876 126 aa16.28■□□□□ 0.2
PDCD4-205ENST00000467574 HIST1H2BCP62807 126 aa16.28■□□□□ 0.2
PDCD4-205ENST00000467574 HIST2H2BEQ16778 126 aa16.28■□□□□ 0.2
PDCD4-205ENST00000467574 HIST2H2BFQ5QNW6 126 aaPredicted RBP16.28■□□□□ 0.2
PDCD4-205ENST00000467574 HIST1H2BHQ93079 126 aa16.28■□□□□ 0.2
PDCD4-205ENST00000467574 HIST1H2BNQ99877 126 aa16.28■□□□□ 0.2
PDCD4-205ENST00000467574 HIST1H2BMQ99879 126 aa16.28■□□□□ 0.2
PDCD4-205ENST00000467574 CHTOPQ9Y3Y2 248 aaKnown RBP16.28■□□□□ 0.2
PDCD4-205ENST00000467574 NDUFC2-KCTD14E9PQ53 114 aa16.27■□□□□ 0.2
PDCD4-205ENST00000467574 F8VRH5 84 aa16.27■□□□□ 0.2
PDCD4-205ENST00000467574 LEPROTL1O95214 131 aa16.24■□□□□ 0.19
PDCD4-205ENST00000467574 GAGE2EQ4V326 116 aa16.24■□□□□ 0.19
PDCD4-205ENST00000467574 GAGE2DQ9UEU5 116 aa16.24■□□□□ 0.19
PDCD4-205ENST00000467574 C7orf33Q8WU49 177 aa16.23■□□□□ 0.19
PDCD4-205ENST00000467574 HNRNPA3P51991 378 aaKnown RBP16.22■□□□□ 0.19
PDCD4-205ENST00000467574 LRP1Q07954 4544 aaKnown RBP16.22■□□□□ 0.19
PDCD4-205ENST00000467574 FAM168BA1KXE4 195 aa16.21■□□□□ 0.19
PDCD4-205ENST00000467574 ATP6V1G1O75348 118 aa16.21■□□□□ 0.19
PDCD4-205ENST00000467574 ODF1Q14990 250 aa16.21■□□□□ 0.19
PDCD4-205ENST00000467574 TMEM170BQ5T4T1 132 aa16.21■□□□□ 0.19
PDCD4-205ENST00000467574 FAT3Q8TDW7 4589 aa16.21■□□□□ 0.19
PDCD4-205ENST00000467574 C9orf129Q5T035 196 aaKnown RBP16.2■□□□□ 0.18
PDCD4-205ENST00000467574 KRTAP7-1Q8IUC3 87 aa16.2■□□□□ 0.18
PDCD4-205ENST00000467574 S100A1P23297 94 aa16.18■□□□□ 0.18
PDCD4-205ENST00000467574 HSPB8Q9UJY1 196 aa16.18■□□□□ 0.18
PDCD4-205ENST00000467574 FABP4P15090 132 aa16.17■□□□□ 0.18
PDCD4-205ENST00000467574 PRR3P79522 188 aaKnown RBP16.17■□□□□ 0.18
PDCD4-205ENST00000467574 DMBT1Q9UGM3 2413 aaPredicted RBP16.16■□□□□ 0.18
PDCD4-205ENST00000467574 TMEM223A0PJW6 202 aa16.16■□□□□ 0.18
PDCD4-205ENST00000467574 H0Y8G0 127 aa16.16■□□□□ 0.18
PDCD4-205ENST00000467574 PHF5AQ7RTV0 110 aaKnown RBP16.14■□□□□ 0.17
PDCD4-205ENST00000467574 FAM19A5Q7Z5A7 132 aaPredicted RBP16.14■□□□□ 0.17
PDCD4-205ENST00000467574 XAGE1AQ9HD64 81 aa16.12■□□□□ 0.17
PDCD4-205ENST00000467574 COA6Q5JTJ3 125 aaKnown RBP16.11■□□□□ 0.17
PDCD4-205ENST00000467574 ZNF625Q96I27 306 aaPredicted RBP16.1■□□□□ 0.17
PDCD4-205ENST00000467574 SERTAD4-AS1Q5TG53 156 aa16.08■□□□□ 0.16
PDCD4-205ENST00000467574 M0QXV9 152 aa16.07■□□□□ 0.16
PDCD4-205ENST00000467574 KRTAP11-1Q8IUC1 163 aa16.07■□□□□ 0.16
PDCD4-205ENST00000467574 HERC1Q15751 4861 aa16.06■□□□□ 0.16
PDCD4-205ENST00000467574 PLNP26678 52 aa16.06■□□□□ 0.16
PDCD4-205ENST00000467574 PMCHL2Q9BQD1 86 aa16.06■□□□□ 0.16
PDCD4-205ENST00000467574 MAP1LC3CQ9BXW4 147 aa16.06■□□□□ 0.16
PDCD4-205ENST00000467574 SFTA2Q6UW10 78 aa16.05■□□□□ 0.16
PDCD4-205ENST00000467574 PSORS1C2Q9UIG4 136 aa16.05■□□□□ 0.16
PDCD4-205ENST00000467574 DPM2O94777 84 aa16.04■□□□□ 0.16
PDCD4-205ENST00000467574 ERG28Q9UKR5 140 aa16.04■□□□□ 0.16
PDCD4-205ENST00000467574 KRTAP29-1A8MX34 341 aaPredicted RBP16.02■□□□□ 0.16
PDCD4-205ENST00000467574 PFN2P35080 140 aa16.02■□□□□ 0.16
PDCD4-205ENST00000467574 SYS1-DBNDD2H3BUS1 97 aa16.01■□□□□ 0.15
PDCD4-205ENST00000467574 IGKCP01834 107 aa16■□□□□ 0.15
PDCD4-205ENST00000467574 TSPEAR-AS2P59090 65 aa16■□□□□ 0.15
PDCD4-205ENST00000467574 COX17Q14061 63 aa16■□□□□ 0.15
PDCD4-205ENST00000467574 PLA2G2DQ9UNK4 145 aa15.99■□□□□ 0.15
PDCD4-205ENST00000467574 C22orf24Q9Y442 160 aa15.99■□□□□ 0.15
PDCD4-205ENST00000467574 TP73-AS1Q9UF72 201 aa15.97■□□□□ 0.15
PDCD4-205ENST00000467574 SRSF9Q13242 221 aaKnown RBP eCLIP15.96■□□□□ 0.15
PDCD4-205ENST00000467574 SND1-IT1Q9HBX3 110 aa15.96■□□□□ 0.15
PDCD4-205ENST00000467574 LEPROTO15243 131 aa15.95■□□□□ 0.14
PDCD4-205ENST00000467574 C1orf137Q5JT78 98 aa15.95■□□□□ 0.14
PDCD4-205ENST00000467574 LINC01545Q5VT33 79 aa15.95■□□□□ 0.14
PDCD4-205ENST00000467574 NDUFA12Q9UI09 145 aa15.95■□□□□ 0.14
PDCD4-205ENST00000467574 IGLV5-37A0A075B6J1 123 aa15.94■□□□□ 0.14
PDCD4-205ENST00000467574 OXTP01178 125 aa15.94■□□□□ 0.14
PDCD4-205ENST00000467574 UBE2BP63146 152 aa15.94■□□□□ 0.14
PDCD4-205ENST00000467574 C3orf79P0CE67 100 aa15.93■□□□□ 0.14
PDCD4-205ENST00000467574 PET117Q6UWS5 81 aa15.93■□□□□ 0.14
PDCD4-205ENST00000467574 PLEKHB2Q96CS7 222 aa15.93■□□□□ 0.14
PDCD4-205ENST00000467574 HERVK_113P61574 105 aa15.92■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 857.3 ms