RNA–Protein interactions for RNA: ENST00000467238.1

SND1-205, Transcript of staphylococcal nuclease and tudor domain containing 1, humanhuman

TSL 3

Gene SND1, Length 716 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SND1-205ENST00000467238 MAP1LC3CQ9BXW4 147 aa4.48□□□□□ -1.69
SND1-205ENST00000467238 RNASE7Q9H1E1 156 aaKnown RBP4.48□□□□□ -1.69
SND1-205ENST00000467238 RPP21Q9H633 154 aaKnown RBP4.48□□□□□ -1.69
SND1-205ENST00000467238 RNF213Q63HN8 5207 aa4.47□□□□□ -1.69
SND1-205ENST00000467238 IGHV3-64A0A075B6Q5 118 aa4.47□□□□□ -1.69
SND1-205ENST00000467238 TRAV16A0A0A6YYK6 109 aaPredicted RBP4.47□□□□□ -1.69
SND1-205ENST00000467238 TRAV26-2A0A0B4J265 109 aa4.47□□□□□ -1.69
SND1-205ENST00000467238 H3BRM9 83 aa4.47□□□□□ -1.69
SND1-205ENST00000467238 TAX1BP3O14907 124 aa4.47□□□□□ -1.69
SND1-205ENST00000467238 CHTF8P0CG12 524 aa4.47□□□□□ -1.69
SND1-205ENST00000467238 BVES-AS1Q5T3Y7 98 aa4.47□□□□□ -1.69
SND1-205ENST00000467238 FA2HQ7L5A8 372 aa4.47□□□□□ -1.69
SND1-205ENST00000467238 SPACA4Q8TDM5 124 aa4.47□□□□□ -1.69
SND1-205ENST00000467238 GTSF1Q8WW33 167 aa4.47□□□□□ -1.69
SND1-205ENST00000467238 RPL39LQ96EH5 51 aaKnown RBP4.47□□□□□ -1.69
SND1-205ENST00000467238 RNF185Q96GF1 192 aa4.47□□□□□ -1.69
SND1-205ENST00000467238 A0A087WYN8 130 aa4.46□□□□□ -1.7
SND1-205ENST00000467238 IGKV3OR2-268A0A0C4DH90 116 aa4.46□□□□□ -1.7
SND1-205ENST00000467238 LEPROTL1O95214 131 aa4.46□□□□□ -1.7
SND1-205ENST00000467238 NCR2O95944 276 aa4.46□□□□□ -1.7
SND1-205ENST00000467238 FOXA3P55318 350 aaPredicted RBP4.46□□□□□ -1.7
SND1-205ENST00000467238 KRTAP2-2Q9BYT5 123 aa4.46□□□□□ -1.7
SND1-205ENST00000467238 IGKV2D-29A0A075B6S2 120 aaPredicted RBP4.45□□□□□ -1.7
SND1-205ENST00000467238 IGKV2-29A2NJV5 120 aaPredicted RBP4.45□□□□□ -1.7
SND1-205ENST00000467238 SDHAF1A6NFY7 115 aa4.45□□□□□ -1.7
SND1-205ENST00000467238 A8MWL6 223 aa4.45□□□□□ -1.7
SND1-205ENST00000467238 SYS1-DBNDD2H3BUS1 97 aa4.45□□□□□ -1.7
SND1-205ENST00000467238 H7C423 109 aa4.45□□□□□ -1.7
SND1-205ENST00000467238 MT1HL1P0DM35 61 aa4.45□□□□□ -1.7
SND1-205ENST00000467238 COX8AP10176 69 aa4.45□□□□□ -1.7
SND1-205ENST00000467238 HBBP68871 147 aa4.45□□□□□ -1.7
SND1-205ENST00000467238 HSD52Q0P140 79 aa4.45□□□□□ -1.7
SND1-205ENST00000467238 AMMECR1LQ6DCA0 310 aa4.45□□□□□ -1.7
SND1-205ENST00000467238 CFAP161Q6P656 301 aa4.45□□□□□ -1.7
SND1-205ENST00000467238 Q6ZRU5 148 aa4.45□□□□□ -1.7
SND1-205ENST00000467238 CHCHD10Q8WYQ3 142 aaPredicted RBP4.45□□□□□ -1.7
SND1-205ENST00000467238 VCX2Q9H322 139 aa4.45□□□□□ -1.7
SND1-205ENST00000467238 SPANXA1Q9NS26 97 aa4.45□□□□□ -1.7
SND1-205ENST00000467238 PLAC8Q9NZF1 115 aa4.45□□□□□ -1.7
SND1-205ENST00000467238 GVQW2A0A096LPI5 108 aaPredicted RBP4.44□□□□□ -1.7
SND1-205ENST00000467238 TRBV6-5A0A0K0K1A5 114 aa4.44□□□□□ -1.7
SND1-205ENST00000467238 K7EP34 96 aa4.44□□□□□ -1.7
SND1-205ENST00000467238 FGF6P10767 208 aa4.44□□□□□ -1.7
SND1-205ENST00000467238 COX6A2Q02221 97 aa4.44□□□□□ -1.7
SND1-205ENST00000467238 HIGD2BQ4VC39 106 aa4.44□□□□□ -1.7
SND1-205ENST00000467238 RNASEKQ6P5S7 137 aaKnown RBP4.44□□□□□ -1.7
SND1-205ENST00000467238 PRSS3P2Q8NHM4 247 aa4.44□□□□□ -1.7
SND1-205ENST00000467238 I3L3M4 83 aa4.43□□□□□ -1.7
SND1-205ENST00000467238 GAS8-AS1O95177 125 aa4.43□□□□□ -1.7
SND1-205ENST00000467238 FABP2P12104 132 aa4.43□□□□□ -1.7
SND1-205ENST00000467238 LCE1EQ5T753 118 aa4.43□□□□□ -1.7
SND1-205ENST00000467238 LINC01545Q5VT33 79 aa4.43□□□□□ -1.7
SND1-205ENST00000467238 BOD1L2Q8IYS8 172 aa4.43□□□□□ -1.7
SND1-205ENST00000467238 DPH3Q96FX2 82 aa4.43□□□□□ -1.7
SND1-205ENST00000467238 SIGMAR1Q99720 223 aa4.43□□□□□ -1.7
SND1-205ENST00000467238 LPAP08519 4548 aa4.42□□□□□ -1.7
SND1-205ENST00000467238 IGKV2-24A0A0C4DH68 120 aa4.42□□□□□ -1.7
SND1-205ENST00000467238 A0A1B0GUT8 65 aa4.42□□□□□ -1.7
SND1-205ENST00000467238 A0A1B0GXF2 115 aa4.42□□□□□ -1.7
SND1-205ENST00000467238 HIGD1CA8MV81 97 aa4.42□□□□□ -1.7
SND1-205ENST00000467238 TSHBP01222 138 aa4.42□□□□□ -1.7
SND1-205ENST00000467238 XCL1P47992 114 aa4.42□□□□□ -1.7
SND1-205ENST00000467238 POLR2KP53803 58 aaKnown RBP4.42□□□□□ -1.7
SND1-205ENST00000467238 MAJINQ3KP22 176 aa4.42□□□□□ -1.7
SND1-205ENST00000467238 C10orf25Q5T742 122 aa4.42□□□□□ -1.7
SND1-205ENST00000467238 ERASQ7Z444 233 aa4.42□□□□□ -1.7
SND1-205ENST00000467238 FAM19A2Q8N3H0 131 aa4.42□□□□□ -1.7
SND1-205ENST00000467238 C7orf33Q8WU49 177 aa4.42□□□□□ -1.7
SND1-205ENST00000467238 A0A096LNI7 61 aa4.41□□□□□ -1.7
SND1-205ENST00000467238 LINC00959A0A1B0GUT2 108 aa4.41□□□□□ -1.7
SND1-205ENST00000467238 F8W1H4 67 aa4.41□□□□□ -1.7
SND1-205ENST00000467238 RIGQ13278 110 aa4.41□□□□□ -1.7
SND1-205ENST00000467238 KIAA1644Q3SXP7 199 aa4.41□□□□□ -1.7
SND1-205ENST00000467238 NUP35Q8NFH5 326 aa4.41□□□□□ -1.7
SND1-205ENST00000467238 MRAP2Q96G30 205 aa4.41□□□□□ -1.7
SND1-205ENST00000467238 TMEM101Q96IK0 257 aa4.41□□□□□ -1.7
SND1-205ENST00000467238 CDC42SE2Q9NRR3 84 aa4.41□□□□□ -1.7
SND1-205ENST00000467238 HIGD1BQ9P298 99 aa4.41□□□□□ -1.7
SND1-205ENST00000467238 IGHV1-58A0A0C4DH39 117 aa4.4□□□□□ -1.71
SND1-205ENST00000467238 TRBV27A0A0K0K1C4 114 aa4.4□□□□□ -1.71
SND1-205ENST00000467238 A0A1W2PPM0 123 aa4.4□□□□□ -1.71
SND1-205ENST00000467238 SMIM13P0DJ93 91 aa4.4□□□□□ -1.71
SND1-205ENST00000467238 PRR3P79522 188 aaKnown RBP4.4□□□□□ -1.71
SND1-205ENST00000467238 TAL2Q16559 108 aa4.4□□□□□ -1.71
SND1-205ENST00000467238 KRTAP5-1Q6L8H4 278 aa4.4□□□□□ -1.71
SND1-205ENST00000467238 AMN1Q8IY45 258 aa4.4□□□□□ -1.71
SND1-205ENST00000467238 ATOH7Q8N100 152 aa4.4□□□□□ -1.71
SND1-205ENST00000467238 MPLKIPQ8TAP9 179 aa4.4□□□□□ -1.71
SND1-205ENST00000467238 LINC00526Q96FQ7 95 aa4.4□□□□□ -1.71
SND1-205ENST00000467238 CARD19Q96LW7 228 aa4.4□□□□□ -1.71
SND1-205ENST00000467238 SMKR1H3BMG3 65 aa4.39□□□□□ -1.71
SND1-205ENST00000467238 SS18Q15532 418 aa4.39□□□□□ -1.71
SND1-205ENST00000467238 LYRM7Q5U5X0 104 aa4.39□□□□□ -1.71
SND1-205ENST00000467238 CD164L2Q6UWJ8 174 aa4.39□□□□□ -1.71
SND1-205ENST00000467238 NRACQ8N912 160 aa4.39□□□□□ -1.71
SND1-205ENST00000467238 LINC00474Q9P2X8 69 aa4.39□□□□□ -1.71
SND1-205ENST00000467238 PKIGQ9Y2B9 76 aa4.39□□□□□ -1.71
SND1-205ENST00000467238 SPCS1Q9Y6A9 102 aa4.39□□□□□ -1.71
SND1-205ENST00000467238 A0A0A0MQY5 61 aa4.38□□□□□ -1.71
SND1-205ENST00000467238 VCYO14598 125 aa4.38□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 13 ms