RNA–Protein interactions for RNA: ENST00000466288.1

CXCR4-203, Transcript of C-X-C motif chemokine receptor 4, humanhuman

TSL 1 (best)

Gene CXCR4, Length 1,485 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXCR4-203ENST00000466288 TIMM17AQ99595 171 aa9.01□□□□□ -0.97
CXCR4-203ENST00000466288 C2orf88Q9BSF0 95 aa9.01□□□□□ -0.97
CXCR4-203ENST00000466288 H0Y8G0 127 aa9□□□□□ -0.97
CXCR4-203ENST00000466288 DLEU1O43261 78 aa9□□□□□ -0.97
CXCR4-203ENST00000466288 DPM2O94777 84 aa9□□□□□ -0.97
CXCR4-203ENST00000466288 PLNP26678 52 aa9□□□□□ -0.97
CXCR4-203ENST00000466288 COX6A2Q02221 97 aa9□□□□□ -0.97
CXCR4-203ENST00000466288 REG3AQ06141 175 aa9□□□□□ -0.97
CXCR4-203ENST00000466288 SRSF9Q13242 221 aaKnown RBP eCLIP9□□□□□ -0.97
CXCR4-203ENST00000466288 PAPPA-AS1Q5QFB9 102 aa9□□□□□ -0.97
CXCR4-203ENST00000466288 IGKCP01834 107 aa8.99□□□□□ -0.97
CXCR4-203ENST00000466288 MAJINQ3KP22 176 aa8.99□□□□□ -0.97
CXCR4-203ENST00000466288 TRAV8-4A0A0B4J246 113 aa8.98□□□□□ -0.97
CXCR4-203ENST00000466288 COX8AP10176 69 aa8.98□□□□□ -0.97
CXCR4-203ENST00000466288 TMEM97Q5BJF2 176 aa8.98□□□□□ -0.97
CXCR4-203ENST00000466288 F8VRH5 84 aa8.97□□□□□ -0.97
CXCR4-203ENST00000466288 STPG4Q8N801 248 aa8.97□□□□□ -0.97
CXCR4-203ENST00000466288 C20orf203Q8NBC4 194 aa8.97□□□□□ -0.97
CXCR4-203ENST00000466288 TRBV25-1A0A075B6N4 114 aa8.96□□□□□ -0.97
CXCR4-203ENST00000466288 IGKV2-24A0A0C4DH68 120 aa8.96□□□□□ -0.97
CXCR4-203ENST00000466288 IGIPA6NJ69 53 aa8.96□□□□□ -0.98
CXCR4-203ENST00000466288 LORP23490 312 aaPredicted RBP8.96□□□□□ -0.98
CXCR4-203ENST00000466288 PYGO1Q9Y3Y4 419 aa8.96□□□□□ -0.98
CXCR4-203ENST00000466288 KRTAP9-6A0A140TA67 174 aa8.95□□□□□ -0.98
CXCR4-203ENST00000466288 PMVKQ15126 192 aa8.95□□□□□ -0.98
CXCR4-203ENST00000466288 C15orf56Q8N910 161 aa8.95□□□□□ -0.98
CXCR4-203ENST00000466288 SNHG12Q9BXW3 62 aa8.95□□□□□ -0.98
CXCR4-203ENST00000466288 CHTOPQ9Y3Y2 248 aaKnown RBP8.95□□□□□ -0.98
CXCR4-203ENST00000466288 IGLV4-60A0A075B6I1 120 aa8.94□□□□□ -0.98
CXCR4-203ENST00000466288 TSHBP01222 138 aa8.94□□□□□ -0.98
CXCR4-203ENST00000466288 SMAGPQ0VAQ4 97 aa8.94□□□□□ -0.98
CXCR4-203ENST00000466288 BOD1L2Q8IYS8 172 aa8.94□□□□□ -0.98
CXCR4-203ENST00000466288 MRPL35Q9NZE8 188 aaKnown RBP8.93□□□□□ -0.98
CXCR4-203ENST00000466288 A0A1B0GUV1 79 aa8.92□□□□□ -0.98
CXCR4-203ENST00000466288 COL5A1-AS1Q5SY13 56 aa8.92□□□□□ -0.98
CXCR4-203ENST00000466288 A0A096LNI7 61 aa8.91□□□□□ -0.98
CXCR4-203ENST00000466288 ANKRD39Q53RE8 183 aa8.91□□□□□ -0.98
CXCR4-203ENST00000466288 Q6ZRP5 223 aa8.91□□□□□ -0.98
CXCR4-203ENST00000466288 SPANXA1Q9NS26 97 aa8.91□□□□□ -0.98
CXCR4-203ENST00000466288 COTL1Q14019 142 aa8.9□□□□□ -0.98
CXCR4-203ENST00000466288 HIGD2BQ4VC39 106 aa8.9□□□□□ -0.98
CXCR4-203ENST00000466288 ZC2HC1BQ5TFG8 222 aa8.9□□□□□ -0.98
CXCR4-203ENST00000466288 CST9LQ9H4G1 147 aa8.9□□□□□ -0.98
CXCR4-203ENST00000466288 HIGD1BQ9P298 99 aa8.9□□□□□ -0.98
CXCR4-203ENST00000466288 FGF6P10767 208 aa8.89□□□□□ -0.99
CXCR4-203ENST00000466288 CFAP161Q6P656 301 aa8.89□□□□□ -0.99
CXCR4-203ENST00000466288 TIMM21Q9BVV7 248 aa8.89□□□□□ -0.99
CXCR4-203ENST00000466288 GAGE12HA6NDE8 117 aa8.89□□□□□ -0.99
CXCR4-203ENST00000466288 HERVK_113P61574 105 aa8.89□□□□□ -0.99
CXCR4-203ENST00000466288 TMEM243Q9BU79 118 aa8.88□□□□□ -0.99
CXCR4-203ENST00000466288 C11orf86A6NJI1 115 aa8.87□□□□□ -0.99
CXCR4-203ENST00000466288 E9PLD3 99 aa8.87□□□□□ -0.99
CXCR4-203ENST00000466288 NMUP48645 174 aa8.87□□□□□ -0.99
CXCR4-203ENST00000466288 RPL39P62891 51 aaKnown RBP8.87□□□□□ -0.99
CXCR4-203ENST00000466288 MRPS36P82909 103 aaKnown RBP8.87□□□□□ -0.99
CXCR4-203ENST00000466288 VCX2Q9H322 139 aa8.87□□□□□ -0.99
CXCR4-203ENST00000466288 LINC00474Q9P2X8 69 aa8.87□□□□□ -0.99
CXCR4-203ENST00000466288 GVQW2A0A096LPI5 108 aaPredicted RBP8.86□□□□□ -0.99
CXCR4-203ENST00000466288 A0A0U1RQV1 116 aa8.86□□□□□ -0.99
CXCR4-203ENST00000466288 H7C423 109 aa8.86□□□□□ -0.99
CXCR4-203ENST00000466288 SEC11AP67812 179 aa8.86□□□□□ -0.99
CXCR4-203ENST00000466288 HSD52Q0P140 79 aa8.86□□□□□ -0.99
CXCR4-203ENST00000466288 C2orf91Q6ZV80 131 aa8.86□□□□□ -0.99
CXCR4-203ENST00000466288 AMELXQ99217 191 aa8.86□□□□□ -0.99
CXCR4-203ENST00000466288 CSDC2Q9Y534 153 aaKnown RBP8.86□□□□□ -0.99
CXCR4-203ENST00000466288 IGLV4-3A0A075B6K6 122 aa8.85□□□□□ -0.99
CXCR4-203ENST00000466288 TAL2Q16559 108 aa8.85□□□□□ -0.99
CXCR4-203ENST00000466288 IGLV4-69A0A075B6H9 119 aa8.84□□□□□ -0.99
CXCR4-203ENST00000466288 HINT1P49773 126 aaPredicted RBP8.83□□□□□ -1
CXCR4-203ENST00000466288 BVES-AS1Q5T3Y7 98 aa8.83□□□□□ -1
CXCR4-203ENST00000466288 PSORS1C2Q9UIG4 136 aa8.83□□□□□ -1
CXCR4-203ENST00000466288 UBE2D4Q9Y2X8 147 aa8.83□□□□□ -1
CXCR4-203ENST00000466288 BATFQ16520 125 aa8.83□□□□□ -1
CXCR4-203ENST00000466288 PCP2Q8IVA1 136 aa8.83□□□□□ -1
CXCR4-203ENST00000466288 IGKV2D-26A0A0A0MRZ7 120 aa8.82□□□□□ -1
CXCR4-203ENST00000466288 IGKV3OR2-268A0A0C4DH90 116 aa8.82□□□□□ -1
CXCR4-203ENST00000466288 CHCHD10Q8WYQ3 142 aaPredicted RBP8.82□□□□□ -1
CXCR4-203ENST00000466288 MYMXA0A1B0GTQ4 84 aa8.81□□□□□ -1
CXCR4-203ENST00000466288 A6NDN8 102 aa8.81□□□□□ -1
CXCR4-203ENST00000466288 UBE2L6O14933 153 aa8.81□□□□□ -1
CXCR4-203ENST00000466288 PRR26Q8N8Z3 221 aa8.81□□□□□ -1
CXCR4-203ENST00000466288 A0A1B0GV90 55 aa8.8□□□□□ -1
CXCR4-203ENST00000466288 TINCRA0A1B0GVN0 87 aa8.8□□□□□ -1
CXCR4-203ENST00000466288 ZNF25P17030 456 aaPredicted RBP8.8□□□□□ -1
CXCR4-203ENST00000466288 FAM19A3Q7Z5A8 133 aa8.8□□□□□ -1
CXCR4-203ENST00000466288 ORAOV1Q8WV07 137 aa8.8□□□□□ -1
CXCR4-203ENST00000466288 FOXI1Q12951 378 aa8.79□□□□□ -1
CXCR4-203ENST00000466288 TMEM170BQ5T4T1 132 aa8.79□□□□□ -1
CXCR4-203ENST00000466288 PLEKHB2Q96CS7 222 aa8.79□□□□□ -1
CXCR4-203ENST00000466288 LINC00526Q96FQ7 95 aa8.79□□□□□ -1
CXCR4-203ENST00000466288 PKIGQ9Y2B9 76 aa8.79□□□□□ -1
CXCR4-203ENST00000466288 LEPROTO15243 131 aa8.78□□□□□ -1
CXCR4-203ENST00000466288 CARD19Q96LW7 228 aa8.78□□□□□ -1
CXCR4-203ENST00000466288 A0A1W2PNN7 141 aa8.77□□□□□ -1
CXCR4-203ENST00000466288 TMEM223A0PJW6 202 aa8.77□□□□□ -1
CXCR4-203ENST00000466288 ZNF22P17026 224 aaPredicted RBP8.77□□□□□ -1.01
CXCR4-203ENST00000466288 PTTG1IPP53801 180 aa8.77□□□□□ -1.01
CXCR4-203ENST00000466288 FAM104AQ969W3 186 aa8.77□□□□□ -1.01
CXCR4-203ENST00000466288 TMEM101Q96IK0 257 aa8.77□□□□□ -1.01
CXCR4-203ENST00000466288 IGKV2D-29A0A075B6S2 120 aaPredicted RBP8.76□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms