RNA–Protein interactions for RNA: ENST00000465966.4

DDR1-242, Transcript of discoidin domain receptor tyrosine kinase 1, humanhuman

TSL 1 (best)

Gene DDR1, Length 268 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1-242ENST00000465966 LINC00959A0A1B0GUT2 108 aa5.66□□□□□ -1.5
DDR1-242ENST00000465966 DDTP30046 118 aa5.66□□□□□ -1.5
DDR1-242ENST00000465966 HERVK_113P61574 105 aa5.66□□□□□ -1.5
DDR1-242ENST00000465966 HERVK_113P63121 156 aa5.66□□□□□ -1.5
DDR1-242ENST00000465966 MIEN1Q9BRT3 115 aa5.66□□□□□ -1.5
DDR1-242ENST00000465966 GEMIN7Q9H840 131 aaKnown RBP5.66□□□□□ -1.5
DDR1-242ENST00000465966 UQCR10Q9UDW1 63 aa5.66□□□□□ -1.5
DDR1-242ENST00000465966 TRAV8-3A0A0A6YYJ7 113 aa5.65□□□□□ -1.5
DDR1-242ENST00000465966 LINC00587B1AMM8 73 aa5.65□□□□□ -1.5
DDR1-242ENST00000465966 SPINK8P0C7L1 97 aa5.65□□□□□ -1.5
DDR1-242ENST00000465966 SEC11AP67812 179 aa5.65□□□□□ -1.5
DDR1-242ENST00000465966 REG3AQ06141 175 aa5.65□□□□□ -1.5
DDR1-242ENST00000465966 SLC25A34Q6PIV7 304 aa5.65□□□□□ -1.5
DDR1-242ENST00000465966 C2orf91Q6ZV80 131 aa5.65□□□□□ -1.5
DDR1-242ENST00000465966 PRR34Q9NV39 138 aa5.65□□□□□ -1.5
DDR1-242ENST00000465966 KLK12Q9UKR0 248 aa5.65□□□□□ -1.5
DDR1-242ENST00000465966 SMIM1B2RUZ4 78 aa5.64□□□□□ -1.51
DDR1-242ENST00000465966 LEPROTO15243 131 aa5.64□□□□□ -1.51
DDR1-242ENST00000465966 CCL25O15444 150 aa5.64□□□□□ -1.51
DDR1-242ENST00000465966 SCXQ7RTU7 201 aa5.64□□□□□ -1.51
DDR1-242ENST00000465966 BOD1L2Q8IYS8 172 aa5.64□□□□□ -1.51
DDR1-242ENST00000465966 HMCN2Q8NDA2 5059 aa5.63□□□□□ -1.51
DDR1-242ENST00000465966 IGLV10-54A0A075B6I4 117 aa5.63□□□□□ -1.51
DDR1-242ENST00000465966 IGLV2-33A0A075B6J2 118 aaPredicted RBP5.63□□□□□ -1.51
DDR1-242ENST00000465966 IGHV3OR16-9A0A0B4J2B5 98 aa5.63□□□□□ -1.51
DDR1-242ENST00000465966 IGHV1-58A0A0C4DH39 117 aa5.63□□□□□ -1.51
DDR1-242ENST00000465966 IGLV5-39A0A0G2JS06 123 aa5.63□□□□□ -1.51
DDR1-242ENST00000465966 H3BRM9 83 aa5.63□□□□□ -1.51
DDR1-242ENST00000465966 DLEU1O43261 78 aa5.63□□□□□ -1.51
DDR1-242ENST00000465966 XCL1P47992 114 aa5.63□□□□□ -1.51
DDR1-242ENST00000465966 HNRNPA3P51991 378 aaKnown RBP5.63□□□□□ -1.51
DDR1-242ENST00000465966 SS18Q15532 418 aa5.63□□□□□ -1.51
DDR1-242ENST00000465966 ENHOQ6UWT2 76 aa5.63□□□□□ -1.51
DDR1-242ENST00000465966 CHCHD10Q8WYQ3 142 aaPredicted RBP5.63□□□□□ -1.51
DDR1-242ENST00000465966 UBE2WQ96B02 151 aa5.63□□□□□ -1.51
DDR1-242ENST00000465966 COX11Q9Y6N1 276 aa5.63□□□□□ -1.51
DDR1-242ENST00000465966 J3QQQ9 107 aa5.62□□□□□ -1.51
DDR1-242ENST00000465966 CRPP02741 224 aa5.62□□□□□ -1.51
DDR1-242ENST00000465966 PLEKHB2Q96CS7 222 aa5.62□□□□□ -1.51
DDR1-242ENST00000465966 A0A087WZ39 114 aa5.61□□□□□ -1.51
DDR1-242ENST00000465966 MYMXA0A1B0GTQ4 84 aa5.61□□□□□ -1.51
DDR1-242ENST00000465966 ZNF815PA8K554 130 aa5.61□□□□□ -1.51
DDR1-242ENST00000465966 LECT2O14960 151 aa5.61□□□□□ -1.51
DDR1-242ENST00000465966 LGALS3P17931 250 aaKnown RBP5.61□□□□□ -1.51
DDR1-242ENST00000465966 FOXI1Q12951 378 aa5.61□□□□□ -1.51
DDR1-242ENST00000465966 CD164L2Q6UWJ8 174 aa5.61□□□□□ -1.51
DDR1-242ENST00000465966 C5orf38Q86SI9 138 aa5.61□□□□□ -1.51
DDR1-242ENST00000465966 GAGE12HA6NDE8 117 aa5.6□□□□□ -1.51
DDR1-242ENST00000465966 KRTAP10-4P60372 401 aaPredicted RBP5.6□□□□□ -1.51
DDR1-242ENST00000465966 CTAG1AP78358 180 aa5.6□□□□□ -1.51
DDR1-242ENST00000465966 WFDC2Q14508 124 aa5.6□□□□□ -1.51
DDR1-242ENST00000465966 MIAQ16674 131 aa5.6□□□□□ -1.51
DDR1-242ENST00000465966 KRTAP26-1Q6PEX3 210 aa5.6□□□□□ -1.51
DDR1-242ENST00000465966 CIRBP-AS1Q8TBR5 109 aa5.6□□□□□ -1.51
DDR1-242ENST00000465966 RMI2Q96E14 147 aa5.6□□□□□ -1.51
DDR1-242ENST00000465966 COX7A2LO14548 114 aa5.59□□□□□ -1.51
DDR1-242ENST00000465966 LINC01620Q4KN68 170 aa5.59□□□□□ -1.51
DDR1-242ENST00000465966 NDUFA12Q9UI09 145 aa5.59□□□□□ -1.51
DDR1-242ENST00000465966 TRAV8-4A0A0B4J246 113 aa5.58□□□□□ -1.52
DDR1-242ENST00000465966 NDUFA1O15239 70 aa5.58□□□□□ -1.52
DDR1-242ENST00000465966 RPL37AP61513 92 aaKnown RBP5.58□□□□□ -1.52
DDR1-242ENST00000465966 LINC01561Q8N1V8 128 aa5.58□□□□□ -1.52
DDR1-242ENST00000465966 COX7B2Q8TF08 81 aa5.58□□□□□ -1.52
DDR1-242ENST00000465966 ZNF625Q96I27 306 aaPredicted RBP5.58□□□□□ -1.52
DDR1-242ENST00000465966 HIGD1BQ9P298 99 aa5.58□□□□□ -1.52
DDR1-242ENST00000465966 A0A0J9YXY3 114 aa5.57□□□□□ -1.52
DDR1-242ENST00000465966 SCGB1D4Q6XE38 83 aa5.57□□□□□ -1.52
DDR1-242ENST00000465966 ORAOV1Q8WV07 137 aa5.57□□□□□ -1.52
DDR1-242ENST00000465966 C1orf43Q9BWL3 253 aa5.57□□□□□ -1.52
DDR1-242ENST00000465966 TOMM7Q9P0U1 55 aa5.57□□□□□ -1.52
DDR1-242ENST00000465966 IGKV2D-24A0A075B6R9 120 aa5.56□□□□□ -1.52
DDR1-242ENST00000465966 HINT1P49773 126 aaPredicted RBP5.56□□□□□ -1.52
DDR1-242ENST00000465966 HSD52Q0P140 79 aa5.56□□□□□ -1.52
DDR1-242ENST00000465966 KIAA0087Q14695 138 aa5.56□□□□□ -1.52
DDR1-242ENST00000465966 LITAFQ99732 161 aa5.56□□□□□ -1.52
DDR1-242ENST00000465966 SNHG12Q9BXW3 62 aa5.56□□□□□ -1.52
DDR1-242ENST00000465966 MALP21145 153 aa5.55□□□□□ -1.52
DDR1-242ENST00000465966 C14orf177Q52M58 125 aa5.55□□□□□ -1.52
DDR1-242ENST00000465966 Q8IZM0 81 aa5.55□□□□□ -1.52
DDR1-242ENST00000465966 C15orf56Q8N910 161 aa5.55□□□□□ -1.52
DDR1-242ENST00000465966 SPAG11BQ08648 103 aa5.54□□□□□ -1.52
DDR1-242ENST00000465966 BATFQ16520 125 aa5.54□□□□□ -1.52
DDR1-242ENST00000465966 BVES-AS1Q5T3Y7 98 aa5.54□□□□□ -1.52
DDR1-242ENST00000465966 C2orf82Q6UX34 121 aa5.54□□□□□ -1.52
DDR1-242ENST00000465966 SPANXB1Q9NS25 103 aaPredicted RBP5.54□□□□□ -1.52
DDR1-242ENST00000465966 LRP1Q07954 4544 aaKnown RBP5.54□□□□□ -1.52
DDR1-242ENST00000465966 DNAH8Q96JB1 4490 aa5.54□□□□□ -1.52
DDR1-242ENST00000465966 TMEM238C9JI98 176 aa5.53□□□□□ -1.52
DDR1-242ENST00000465966 M0R143 59 aa5.53□□□□□ -1.52
DDR1-242ENST00000465966 APOMO95445 188 aa5.53□□□□□ -1.52
DDR1-242ENST00000465966 PRSS2P07478 247 aa5.53□□□□□ -1.52
DDR1-242ENST00000465966 FXYD2P54710 66 aa5.53□□□□□ -1.52
DDR1-242ENST00000465966 TAL2Q16559 108 aa5.53□□□□□ -1.52
DDR1-242ENST00000465966 Q6ZRU5 148 aa5.53□□□□□ -1.52
DDR1-242ENST00000465966 LINC00526Q96FQ7 95 aa5.53□□□□□ -1.52
DDR1-242ENST00000465966 HIST1H4GQ99525 98 aa5.53□□□□□ -1.52
DDR1-242ENST00000465966 TIMM17BO60830 172 aa5.52□□□□□ -1.53
DDR1-242ENST00000465966 HERV-K104P63124 156 aa5.52□□□□□ -1.53
DDR1-242ENST00000465966 HIGD2BQ4VC39 106 aa5.52□□□□□ -1.53
DDR1-242ENST00000465966 C6orf226Q5I0X4 101 aa5.52□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 68.9 ms