RNA–Protein interactions for RNA: ENST00000465903.5

SMC4-206, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 3

Gene SMC4, Length 849 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-206ENST00000465903 SMIM1B2RUZ4 78 aa16.26■□□□□ 0.19
SMC4-206ENST00000465903 ATP5LO75964 103 aa16.26■□□□□ 0.19
SMC4-206ENST00000465903 MYCBP2O75592 4640 aa16.25■□□□□ 0.19
SMC4-206ENST00000465903 TRBV30A0A0K0K1B3 111 aa16.25■□□□□ 0.19
SMC4-206ENST00000465903 A0A1W2PNN7 141 aa16.25■□□□□ 0.19
SMC4-206ENST00000465903 PRSS2P07478 247 aa16.25■□□□□ 0.19
SMC4-206ENST00000465903 IGLC3P0DOY3 106 aa16.25■□□□□ 0.19
SMC4-206ENST00000465903 NDUFA6P56556 154 aa16.25■□□□□ 0.19
SMC4-206ENST00000465903 SCO1O75880 301 aa16.24■□□□□ 0.19
SMC4-206ENST00000465903 C6orf226Q5I0X4 101 aa16.24■□□□□ 0.19
SMC4-206ENST00000465903 Q6ZRP5 223 aa16.24■□□□□ 0.19
SMC4-206ENST00000465903 BAGE3Q86Y29 109 aa16.23■□□□□ 0.19
SMC4-206ENST00000465903 C9orf116Q5BN46 136 aaPredicted RBP16.22■□□□□ 0.19
SMC4-206ENST00000465903 HNRNPA3P51991 378 aaKnown RBP16.21■□□□□ 0.19
SMC4-206ENST00000465903 LINC00310P59036 64 aa16.21■□□□□ 0.19
SMC4-206ENST00000465903 SPINK8P0C7L1 97 aa16.2■□□□□ 0.18
SMC4-206ENST00000465903 CKS1BP61024 79 aa16.2■□□□□ 0.18
SMC4-206ENST00000465903 FAM19A2Q8N3H0 131 aa16.2■□□□□ 0.18
SMC4-206ENST00000465903 C7orf33Q8WU49 177 aa16.2■□□□□ 0.18
SMC4-206ENST00000465903 HSBP1O75506 76 aa16.18■□□□□ 0.18
SMC4-206ENST00000465903 ZNF22P17026 224 aaPredicted RBP16.18■□□□□ 0.18
SMC4-206ENST00000465903 GAGE2EQ4V326 116 aa16.17■□□□□ 0.18
SMC4-206ENST00000465903 COX7B2Q8TF08 81 aa16.17■□□□□ 0.18
SMC4-206ENST00000465903 IFI27L1Q96BM0 104 aa16.17■□□□□ 0.18
SMC4-206ENST00000465903 GAGE2DQ9UEU5 116 aa16.17■□□□□ 0.18
SMC4-206ENST00000465903 NDUFC2-KCTD14E9PQ53 114 aa16.16■□□□□ 0.18
SMC4-206ENST00000465903 SERF1AO75920 110 aa16.16■□□□□ 0.18
SMC4-206ENST00000465903 H3BRM9 83 aa16.15■□□□□ 0.18
SMC4-206ENST00000465903 NUPR1O60356 82 aa16.15■□□□□ 0.18
SMC4-206ENST00000465903 C11orf86A6NJI1 115 aa16.14■□□□□ 0.17
SMC4-206ENST00000465903 F8VRH5 84 aa16.14■□□□□ 0.17
SMC4-206ENST00000465903 CXCL5P42830 114 aa16.14■□□□□ 0.17
SMC4-206ENST00000465903 LRP1Q07954 4544 aaKnown RBP16.13■□□□□ 0.17
SMC4-206ENST00000465903 TRAV12-1A0A0B4J245 112 aa16.13■□□□□ 0.17
SMC4-206ENST00000465903 IGLV5-39A0A0G2JS06 123 aa16.13■□□□□ 0.17
SMC4-206ENST00000465903 FAM168BA1KXE4 195 aa16.13■□□□□ 0.17
SMC4-206ENST00000465903 CHTOPQ9Y3Y2 248 aaKnown RBP16.13■□□□□ 0.17
SMC4-206ENST00000465903 KRTAP7-1Q8IUC3 87 aa16.12■□□□□ 0.17
SMC4-206ENST00000465903 FAT3Q8TDW7 4589 aa16.12■□□□□ 0.17
SMC4-206ENST00000465903 C9orf129Q5T035 196 aaKnown RBP16.11■□□□□ 0.17
SMC4-206ENST00000465903 PRR3P79522 188 aaKnown RBP16.1■□□□□ 0.17
SMC4-206ENST00000465903 PHF5AQ7RTV0 110 aaKnown RBP16.1■□□□□ 0.17
SMC4-206ENST00000465903 DMBT1Q9UGM3 2413 aaPredicted RBP16.08■□□□□ 0.17
SMC4-206ENST00000465903 TMEM170BQ5T4T1 132 aa16.07■□□□□ 0.16
SMC4-206ENST00000465903 KRTAP29-1A8MX34 341 aaPredicted RBP16.06■□□□□ 0.16
SMC4-206ENST00000465903 LEPROTL1O95214 131 aa16.06■□□□□ 0.16
SMC4-206ENST00000465903 FAM19A5Q7Z5A7 132 aaPredicted RBP16.05■□□□□ 0.16
SMC4-206ENST00000465903 HIST1H2BKO60814 126 aa16.04■□□□□ 0.16
SMC4-206ENST00000465903 HIST1H2BJP06899 126 aa16.04■□□□□ 0.16
SMC4-206ENST00000465903 HIST1H2BOP23527 126 aa16.04■□□□□ 0.16
SMC4-206ENST00000465903 HIST1H2BBP33778 126 aa16.04■□□□□ 0.16
SMC4-206ENST00000465903 HIST1H2BDP58876 126 aa16.04■□□□□ 0.16
SMC4-206ENST00000465903 HIST1H2BCP62807 126 aa16.04■□□□□ 0.16
SMC4-206ENST00000465903 HIST2H2BEQ16778 126 aa16.04■□□□□ 0.16
SMC4-206ENST00000465903 HIST2H2BFQ5QNW6 126 aaPredicted RBP16.04■□□□□ 0.16
SMC4-206ENST00000465903 HIST1H2BHQ93079 126 aa16.04■□□□□ 0.16
SMC4-206ENST00000465903 HIST1H2BNQ99877 126 aa16.04■□□□□ 0.16
SMC4-206ENST00000465903 HIST1H2BMQ99879 126 aa16.04■□□□□ 0.16
SMC4-206ENST00000465903 XAGE1AQ9HD64 81 aa16.03■□□□□ 0.16
SMC4-206ENST00000465903 TMEM223A0PJW6 202 aa16.01■□□□□ 0.15
SMC4-206ENST00000465903 ODF1Q14990 250 aa16.01■□□□□ 0.15
SMC4-206ENST00000465903 KRTAP11-1Q8IUC1 163 aa16.01■□□□□ 0.15
SMC4-206ENST00000465903 FABP4P15090 132 aa16■□□□□ 0.15
SMC4-206ENST00000465903 PSORS1C2Q9UIG4 136 aa16■□□□□ 0.15
SMC4-206ENST00000465903 SERTAD4-AS1Q5TG53 156 aa15.99■□□□□ 0.15
SMC4-206ENST00000465903 HERC1Q15751 4861 aa15.99■□□□□ 0.15
SMC4-206ENST00000465903 OXTP01178 125 aa15.98■□□□□ 0.15
SMC4-206ENST00000465903 H0Y8G0 127 aa15.97■□□□□ 0.15
SMC4-206ENST00000465903 M0QXV9 152 aa15.97■□□□□ 0.15
SMC4-206ENST00000465903 SRSF9Q13242 221 aaKnown RBP eCLIP15.97■□□□□ 0.15
SMC4-206ENST00000465903 HSPB8Q9UJY1 196 aa15.97■□□□□ 0.15
SMC4-206ENST00000465903 J3QL48 77 aa15.96■□□□□ 0.15
SMC4-206ENST00000465903 ZNF625Q96I27 306 aaPredicted RBP15.94■□□□□ 0.14
SMC4-206ENST00000465903 C22orf24Q9Y442 160 aa15.93■□□□□ 0.14
SMC4-206ENST00000465903 ERG28Q9UKR5 140 aa15.92■□□□□ 0.14
SMC4-206ENST00000465903 PFN2P35080 140 aa15.91■□□□□ 0.14
SMC4-206ENST00000465903 C1orf137Q5JT78 98 aa15.91■□□□□ 0.14
SMC4-206ENST00000465903 SPINK6Q6UWN8 80 aa15.91■□□□□ 0.14
SMC4-206ENST00000465903 PLA2G2DQ9UNK4 145 aa15.9■□□□□ 0.14
SMC4-206ENST00000465903 SFTA2Q6UW10 78 aa15.89■□□□□ 0.13
SMC4-206ENST00000465903 S100A1P23297 94 aa15.88■□□□□ 0.13
SMC4-206ENST00000465903 COX17Q14061 63 aa15.88■□□□□ 0.13
SMC4-206ENST00000465903 PMCHL2Q9BQD1 86 aa15.88■□□□□ 0.13
SMC4-206ENST00000465903 UBE2BP63146 152 aa15.87■□□□□ 0.13
SMC4-206ENST00000465903 MAP1LC3CQ9BXW4 147 aa15.87■□□□□ 0.13
SMC4-206ENST00000465903 COA6Q5JTJ3 125 aaKnown RBP15.86■□□□□ 0.13
SMC4-206ENST00000465903 TP73-AS1Q9UF72 201 aa15.86■□□□□ 0.13
SMC4-206ENST00000465903 ATP6V1G1O75348 118 aa15.85■□□□□ 0.13
SMC4-206ENST00000465903 DPM2O94777 84 aa15.85■□□□□ 0.13
SMC4-206ENST00000465903 PLNP26678 52 aa15.85■□□□□ 0.13
SMC4-206ENST00000465903 IGLV7-43P04211 117 aa15.84■□□□□ 0.13
SMC4-206ENST00000465903 SND1-IT1Q9HBX3 110 aa15.84■□□□□ 0.13
SMC4-206ENST00000465903 IGLV5-37A0A075B6J1 123 aa15.83■□□□□ 0.12
SMC4-206ENST00000465903 IGKCP01834 107 aa15.83■□□□□ 0.12
SMC4-206ENST00000465903 MT1HL1P0DM35 61 aa15.83■□□□□ 0.12
SMC4-206ENST00000465903 LBHQ53QV2 105 aaPredicted RBP15.83■□□□□ 0.12
SMC4-206ENST00000465903 MRPL55Q7Z7F7 128 aaKnown RBP15.83■□□□□ 0.12
SMC4-206ENST00000465903 SYS1-DBNDD2H3BUS1 97 aa15.81■□□□□ 0.12
SMC4-206ENST00000465903 LEPROTO15243 131 aa15.81■□□□□ 0.12
SMC4-206ENST00000465903 TSPEAR-AS2P59090 65 aa15.81■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 80.4 ms