RNA–Protein interactions for RNA: ENST00000465842.1

CHKB-204, Transcript of choline kinase beta, humanhuman

TSL 2

Gene CHKB, Length 428 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHKB-204ENST00000465842 GAGE2DQ9UEU5 116 aa11.85□□□□□ -0.51
CHKB-204ENST00000465842 HNRNPA3P51991 378 aaKnown RBP11.84□□□□□ -0.51
CHKB-204ENST00000465842 C9orf116Q5BN46 136 aaPredicted RBP11.84□□□□□ -0.51
CHKB-204ENST00000465842 A0A096LNJ9 63 aa11.83□□□□□ -0.52
CHKB-204ENST00000465842 A0A1W2PNN7 141 aa11.83□□□□□ -0.52
CHKB-204ENST00000465842 TLX1NBP0CAT3 122 aa11.83□□□□□ -0.52
CHKB-204ENST00000465842 Q6ZRP5 223 aa11.83□□□□□ -0.52
CHKB-204ENST00000465842 KRTAP29-1A8MX34 341 aaPredicted RBP11.82□□□□□ -0.52
CHKB-204ENST00000465842 PRR3P79522 188 aaKnown RBP11.82□□□□□ -0.52
CHKB-204ENST00000465842 ATP5LO75964 103 aa11.81□□□□□ -0.52
CHKB-204ENST00000465842 SMIM1B2RUZ4 78 aa11.8□□□□□ -0.52
CHKB-204ENST00000465842 NDUFC2-KCTD14E9PQ53 114 aa11.8□□□□□ -0.52
CHKB-204ENST00000465842 H3BRM9 83 aa11.8□□□□□ -0.52
CHKB-204ENST00000465842 PDZD11Q5EBL8 140 aa11.8□□□□□ -0.52
CHKB-204ENST00000465842 IGLV5-45A0A087WSX0 123 aa11.79□□□□□ -0.52
CHKB-204ENST00000465842 SPINK8P0C7L1 97 aa11.79□□□□□ -0.52
CHKB-204ENST00000465842 CXCL5P42830 114 aa11.79□□□□□ -0.52
CHKB-204ENST00000465842 FAM19A5Q7Z5A7 132 aaPredicted RBP11.79□□□□□ -0.52
CHKB-204ENST00000465842 COX7B2Q8TF08 81 aa11.79□□□□□ -0.52
CHKB-204ENST00000465842 CHCHD1Q96BP2 118 aaKnown RBP11.79□□□□□ -0.52
CHKB-204ENST00000465842 F8VRH5 84 aa11.78□□□□□ -0.52
CHKB-204ENST00000465842 OXTP01178 125 aa11.78□□□□□ -0.52
CHKB-204ENST00000465842 BAGE3Q86Y29 109 aa11.78□□□□□ -0.52
CHKB-204ENST00000465842 PHF5AQ7RTV0 110 aaKnown RBP11.77□□□□□ -0.53
CHKB-204ENST00000465842 FAM168BA1KXE4 195 aa11.76□□□□□ -0.53
CHKB-204ENST00000465842 TRGC2P03986 189 aa11.76□□□□□ -0.53
CHKB-204ENST00000465842 IGLC3P0DOY3 106 aa11.76□□□□□ -0.53
CHKB-204ENST00000465842 HSBP1O75506 76 aa11.75□□□□□ -0.53
CHKB-204ENST00000465842 DMBT1Q9UGM3 2413 aaPredicted RBP11.74□□□□□ -0.53
CHKB-204ENST00000465842 ZNF22P17026 224 aaPredicted RBP11.72□□□□□ -0.53
CHKB-204ENST00000465842 C9orf129Q5T035 196 aaKnown RBP11.72□□□□□ -0.53
CHKB-204ENST00000465842 CHTOPQ9Y3Y2 248 aaKnown RBP11.72□□□□□ -0.53
CHKB-204ENST00000465842 MYCBP2O75592 4640 aa11.72□□□□□ -0.53
CHKB-204ENST00000465842 M0QXV9 152 aa11.71□□□□□ -0.53
CHKB-204ENST00000465842 TMEM170BQ5T4T1 132 aa11.71□□□□□ -0.53
CHKB-204ENST00000465842 IFI27L1Q96BM0 104 aa11.71□□□□□ -0.53
CHKB-204ENST00000465842 UBE2BP63146 152 aa11.7□□□□□ -0.54
CHKB-204ENST00000465842 FAM19A2Q8N3H0 131 aa11.7□□□□□ -0.54
CHKB-204ENST00000465842 XAGE1AQ9HD64 81 aa11.7□□□□□ -0.54
CHKB-204ENST00000465842 PSORS1C2Q9UIG4 136 aa11.7□□□□□ -0.54
CHKB-204ENST00000465842 C11orf86A6NJI1 115 aa11.69□□□□□ -0.54
CHKB-204ENST00000465842 C1orf137Q5JT78 98 aa11.69□□□□□ -0.54
CHKB-204ENST00000465842 COLCA2A8K830 154 aa11.68□□□□□ -0.54
CHKB-204ENST00000465842 SPINK6Q6UWN8 80 aa11.68□□□□□ -0.54
CHKB-204ENST00000465842 TRAV12-1A0A0B4J245 112 aa11.66□□□□□ -0.54
CHKB-204ENST00000465842 IGLV5-39A0A0G2JS06 123 aa11.66□□□□□ -0.54
CHKB-204ENST00000465842 H0Y8G0 127 aa11.66□□□□□ -0.54
CHKB-204ENST00000465842 SERF1AO75920 110 aa11.66□□□□□ -0.54
CHKB-204ENST00000465842 KRTAP7-1Q8IUC3 87 aa11.65□□□□□ -0.54
CHKB-204ENST00000465842 SERTAD4-AS1Q5TG53 156 aa11.64□□□□□ -0.55
CHKB-204ENST00000465842 REG3GQ6UW15 175 aa11.64□□□□□ -0.55
CHKB-204ENST00000465842 SCO1O75880 301 aa11.63□□□□□ -0.55
CHKB-204ENST00000465842 LEPROTL1O95214 131 aa11.63□□□□□ -0.55
CHKB-204ENST00000465842 PFN2P35080 140 aa11.63□□□□□ -0.55
CHKB-204ENST00000465842 PKHD1L1Q86WI1 4243 aa11.63□□□□□ -0.55
CHKB-204ENST00000465842 SRSF9Q13242 221 aaKnown RBP eCLIP11.62□□□□□ -0.55
CHKB-204ENST00000465842 LBHQ53QV2 105 aaPredicted RBP11.62□□□□□ -0.55
CHKB-204ENST00000465842 C22orf24Q9Y442 160 aa11.62□□□□□ -0.55
CHKB-204ENST00000465842 KRTAP11-1Q8IUC1 163 aa11.61□□□□□ -0.55
CHKB-204ENST00000465842 IGLV7-43P04211 117 aa11.6□□□□□ -0.55
CHKB-204ENST00000465842 LINC00310P59036 64 aa11.6□□□□□ -0.55
CHKB-204ENST00000465842 SFTA2Q6UW10 78 aa11.6□□□□□ -0.55
CHKB-204ENST00000465842 ZNF625Q96I27 306 aaPredicted RBP11.6□□□□□ -0.55
CHKB-204ENST00000465842 HSPB8Q9UJY1 196 aa11.6□□□□□ -0.55
CHKB-204ENST00000465842 ERG28Q9UKR5 140 aa11.6□□□□□ -0.55
CHKB-204ENST00000465842 TMEM223A0PJW6 202 aa11.59□□□□□ -0.55
CHKB-204ENST00000465842 FABP4P15090 132 aa11.59□□□□□ -0.55
CHKB-204ENST00000465842 MRPL55Q7Z7F7 128 aaKnown RBP11.58□□□□□ -0.56
CHKB-204ENST00000465842 NUPR1O60356 82 aa11.57□□□□□ -0.56
CHKB-204ENST00000465842 NKAPP1Q8N9T2 125 aa11.57□□□□□ -0.56
CHKB-204ENST00000465842 MT1HL1P0DM35 61 aa11.56□□□□□ -0.56
CHKB-204ENST00000465842 ODF1Q14990 250 aa11.56□□□□□ -0.56
CHKB-204ENST00000465842 DIRC1Q969H9 104 aa11.56□□□□□ -0.56
CHKB-204ENST00000465842 LINC01600Q96MT4 127 aa11.56□□□□□ -0.56
CHKB-204ENST00000465842 TP73-AS1Q9UF72 201 aa11.56□□□□□ -0.56
CHKB-204ENST00000465842 COX17Q14061 63 aa11.55□□□□□ -0.56
CHKB-204ENST00000465842 PLA2G2DQ9UNK4 145 aa11.55□□□□□ -0.56
CHKB-204ENST00000465842 LRP1Q07954 4544 aaKnown RBP11.54□□□□□ -0.56
CHKB-204ENST00000465842 GAGE10A6NGK3 116 aa11.54□□□□□ -0.56
CHKB-204ENST00000465842 PLNP26678 52 aa11.53□□□□□ -0.56
CHKB-204ENST00000465842 LINC00158P58513 81 aa11.53□□□□□ -0.56
CHKB-204ENST00000465842 SND1-IT1Q9HBX3 110 aa11.53□□□□□ -0.56
CHKB-204ENST00000465842 RPL37AP8A6NKH3 93 aa11.52□□□□□ -0.57
CHKB-204ENST00000465842 HIST1H2BKO60814 126 aa11.52□□□□□ -0.57
CHKB-204ENST00000465842 HIST1H2BJP06899 126 aa11.52□□□□□ -0.57
CHKB-204ENST00000465842 HIST1H2BOP23527 126 aa11.52□□□□□ -0.57
CHKB-204ENST00000465842 HIST1H2BBP33778 126 aa11.52□□□□□ -0.57
CHKB-204ENST00000465842 HIST1H2BDP58876 126 aa11.52□□□□□ -0.57
CHKB-204ENST00000465842 HIST1H2BCP62807 126 aa11.52□□□□□ -0.57
CHKB-204ENST00000465842 HIST2H2BEQ16778 126 aa11.52□□□□□ -0.57
CHKB-204ENST00000465842 HIST2H2BFQ5QNW6 126 aaPredicted RBP11.52□□□□□ -0.57
CHKB-204ENST00000465842 HIST1H2BHQ93079 126 aa11.52□□□□□ -0.57
CHKB-204ENST00000465842 LINC00167Q96N53 147 aa11.52□□□□□ -0.57
CHKB-204ENST00000465842 HIST1H2BNQ99877 126 aa11.52□□□□□ -0.57
CHKB-204ENST00000465842 HIST1H2BMQ99879 126 aa11.52□□□□□ -0.57
CHKB-204ENST00000465842 MAP1LC3CQ9BXW4 147 aa11.52□□□□□ -0.57
CHKB-204ENST00000465842 FAT3Q8TDW7 4589 aa11.52□□□□□ -0.57
CHKB-204ENST00000465842 HERC1Q15751 4861 aa11.51□□□□□ -0.57
CHKB-204ENST00000465842 A0A0U1RRA0 63 aa11.51□□□□□ -0.57
CHKB-204ENST00000465842 ATP6V1G1O75348 118 aa11.51□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 80.1 ms