RNA–Protein interactions for RNA: ENST00000465415.1

CNKSR1-203, Transcript of connector enhancer of kinase suppressor of Ras 1, humanhuman

TSL 2

Gene CNKSR1, Length 624 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNKSR1-203ENST00000465415 PDZD11Q5EBL8 140 aa7.9□□□□□ -1.14
CNKSR1-203ENST00000465415 CHCHD1Q96BP2 118 aaKnown RBP7.9□□□□□ -1.14
CNKSR1-203ENST00000465415 FLG2Q5D862 2391 aaPredicted RBP7.9□□□□□ -1.15
CNKSR1-203ENST00000465415 SMIM1B2RUZ4 78 aa7.89□□□□□ -1.15
CNKSR1-203ENST00000465415 ATP5LO75964 103 aa7.89□□□□□ -1.15
CNKSR1-203ENST00000465415 TRGC2P03986 189 aa7.89□□□□□ -1.15
CNKSR1-203ENST00000465415 TLX1NBP0CAT3 122 aa7.89□□□□□ -1.15
CNKSR1-203ENST00000465415 C6orf226Q5I0X4 101 aa7.89□□□□□ -1.15
CNKSR1-203ENST00000465415 Q6ZRP5 223 aa7.88□□□□□ -1.15
CNKSR1-203ENST00000465415 IGLC3P0DOY3 106 aa7.87□□□□□ -1.15
CNKSR1-203ENST00000465415 CXCL5P42830 114 aa7.87□□□□□ -1.15
CNKSR1-203ENST00000465415 C9orf116Q5BN46 136 aaPredicted RBP7.87□□□□□ -1.15
CNKSR1-203ENST00000465415 BAGE3Q86Y29 109 aa7.87□□□□□ -1.15
CNKSR1-203ENST00000465415 A0A1W2PNN7 141 aa7.86□□□□□ -1.15
CNKSR1-203ENST00000465415 NDUFC2-KCTD14E9PQ53 114 aa7.86□□□□□ -1.15
CNKSR1-203ENST00000465415 F8VRH5 84 aa7.86□□□□□ -1.15
CNKSR1-203ENST00000465415 H3BRM9 83 aa7.86□□□□□ -1.15
CNKSR1-203ENST00000465415 HSBP1O75506 76 aa7.86□□□□□ -1.15
CNKSR1-203ENST00000465415 SPINK8P0C7L1 97 aa7.86□□□□□ -1.15
CNKSR1-203ENST00000465415 HNRNPA3P51991 378 aaKnown RBP7.86□□□□□ -1.15
CNKSR1-203ENST00000465415 GAGE2EQ4V326 116 aa7.86□□□□□ -1.15
CNKSR1-203ENST00000465415 COX7B2Q8TF08 81 aa7.86□□□□□ -1.15
CNKSR1-203ENST00000465415 GAGE2DQ9UEU5 116 aa7.86□□□□□ -1.15
CNKSR1-203ENST00000465415 COLCA2A8K830 154 aa7.85□□□□□ -1.15
CNKSR1-203ENST00000465415 PRR3P79522 188 aaKnown RBP7.85□□□□□ -1.15
CNKSR1-203ENST00000465415 DMBT1Q9UGM3 2413 aaPredicted RBP7.84□□□□□ -1.15
CNKSR1-203ENST00000465415 HERC1Q15751 4861 aa7.84□□□□□ -1.15
CNKSR1-203ENST00000465415 PKHD1L1Q86WI1 4243 aa7.84□□□□□ -1.15
CNKSR1-203ENST00000465415 ZNF22P17026 224 aaPredicted RBP7.84□□□□□ -1.15
CNKSR1-203ENST00000465415 IFI27L1Q96BM0 104 aa7.84□□□□□ -1.15
CNKSR1-203ENST00000465415 SCO1O75880 301 aa7.83□□□□□ -1.16
CNKSR1-203ENST00000465415 SERF1AO75920 110 aa7.83□□□□□ -1.16
CNKSR1-203ENST00000465415 FAM19A5Q7Z5A7 132 aaPredicted RBP7.83□□□□□ -1.16
CNKSR1-203ENST00000465415 FAM19A2Q8N3H0 131 aa7.83□□□□□ -1.16
CNKSR1-203ENST00000465415 FAM168BA1KXE4 195 aa7.82□□□□□ -1.16
CNKSR1-203ENST00000465415 C11orf86A6NJI1 115 aa7.82□□□□□ -1.16
CNKSR1-203ENST00000465415 KRTAP29-1A8MX34 341 aaPredicted RBP7.82□□□□□ -1.16
CNKSR1-203ENST00000465415 J3QL48 77 aa7.82□□□□□ -1.16
CNKSR1-203ENST00000465415 CHTOPQ9Y3Y2 248 aaKnown RBP7.82□□□□□ -1.16
CNKSR1-203ENST00000465415 TRAV12-1A0A0B4J245 112 aa7.81□□□□□ -1.16
CNKSR1-203ENST00000465415 IGLV5-39A0A0G2JS06 123 aa7.81□□□□□ -1.16
CNKSR1-203ENST00000465415 LINC00310P59036 64 aa7.81□□□□□ -1.16
CNKSR1-203ENST00000465415 C9orf129Q5T035 196 aaKnown RBP7.81□□□□□ -1.16
CNKSR1-203ENST00000465415 TMEM170BQ5T4T1 132 aa7.81□□□□□ -1.16
CNKSR1-203ENST00000465415 PHF5AQ7RTV0 110 aaKnown RBP7.81□□□□□ -1.16
CNKSR1-203ENST00000465415 M0QXV9 152 aa7.79□□□□□ -1.16
CNKSR1-203ENST00000465415 OXTP01178 125 aa7.79□□□□□ -1.16
CNKSR1-203ENST00000465415 XAGE1AQ9HD64 81 aa7.79□□□□□ -1.16
CNKSR1-203ENST00000465415 LEPROTL1O95214 131 aa7.78□□□□□ -1.16
CNKSR1-203ENST00000465415 KRTAP7-1Q8IUC3 87 aa7.78□□□□□ -1.16
CNKSR1-203ENST00000465415 PSORS1C2Q9UIG4 136 aa7.78□□□□□ -1.16
CNKSR1-203ENST00000465415 LRP1Q07954 4544 aaKnown RBP7.77□□□□□ -1.16
CNKSR1-203ENST00000465415 FAT3Q8TDW7 4589 aa7.77□□□□□ -1.17
CNKSR1-203ENST00000465415 H0Y8G0 127 aa7.77□□□□□ -1.17
CNKSR1-203ENST00000465415 HSPB8Q9UJY1 196 aa7.77□□□□□ -1.17
CNKSR1-203ENST00000465415 NUPR1O60356 82 aa7.76□□□□□ -1.17
CNKSR1-203ENST00000465415 SERTAD4-AS1Q5TG53 156 aa7.76□□□□□ -1.17
CNKSR1-203ENST00000465415 TMEM223A0PJW6 202 aa7.75□□□□□ -1.17
CNKSR1-203ENST00000465415 FABP4P15090 132 aa7.75□□□□□ -1.17
CNKSR1-203ENST00000465415 UBE2BP63146 152 aa7.75□□□□□ -1.17
CNKSR1-203ENST00000465415 ODF1Q14990 250 aa7.75□□□□□ -1.17
CNKSR1-203ENST00000465415 C1orf137Q5JT78 98 aa7.75□□□□□ -1.17
CNKSR1-203ENST00000465415 SFTA2Q6UW10 78 aa7.75□□□□□ -1.17
CNKSR1-203ENST00000465415 HIST1H2BKO60814 126 aa7.74□□□□□ -1.17
CNKSR1-203ENST00000465415 HIST1H2BJP06899 126 aa7.74□□□□□ -1.17
CNKSR1-203ENST00000465415 HIST1H2BOP23527 126 aa7.74□□□□□ -1.17
CNKSR1-203ENST00000465415 HIST1H2BBP33778 126 aa7.74□□□□□ -1.17
CNKSR1-203ENST00000465415 PFN2P35080 140 aa7.74□□□□□ -1.17
CNKSR1-203ENST00000465415 HIST1H2BDP58876 126 aa7.74□□□□□ -1.17
CNKSR1-203ENST00000465415 HIST1H2BCP62807 126 aa7.74□□□□□ -1.17
CNKSR1-203ENST00000465415 HIST2H2BEQ16778 126 aa7.74□□□□□ -1.17
CNKSR1-203ENST00000465415 HIST2H2BFQ5QNW6 126 aaPredicted RBP7.74□□□□□ -1.17
CNKSR1-203ENST00000465415 SPINK6Q6UWN8 80 aa7.74□□□□□ -1.17
CNKSR1-203ENST00000465415 HIST1H2BHQ93079 126 aa7.74□□□□□ -1.17
CNKSR1-203ENST00000465415 HIST1H2BNQ99877 126 aa7.74□□□□□ -1.17
CNKSR1-203ENST00000465415 HIST1H2BMQ99879 126 aa7.74□□□□□ -1.17
CNKSR1-203ENST00000465415 KRTAP11-1Q8IUC1 163 aa7.73□□□□□ -1.17
CNKSR1-203ENST00000465415 ZNF625Q96I27 306 aaPredicted RBP7.73□□□□□ -1.17
CNKSR1-203ENST00000465415 ERG28Q9UKR5 140 aa7.73□□□□□ -1.17
CNKSR1-203ENST00000465415 PLNP26678 52 aa7.72□□□□□ -1.17
CNKSR1-203ENST00000465415 SRSF9Q13242 221 aaKnown RBP eCLIP7.72□□□□□ -1.17
CNKSR1-203ENST00000465415 C22orf24Q9Y442 160 aa7.72□□□□□ -1.17
CNKSR1-203ENST00000465415 COX17Q14061 63 aa7.71□□□□□ -1.18
CNKSR1-203ENST00000465415 LBHQ53QV2 105 aaPredicted RBP7.71□□□□□ -1.18
CNKSR1-203ENST00000465415 MAP1LC3CQ9BXW4 147 aa7.71□□□□□ -1.18
CNKSR1-203ENST00000465415 TP73-AS1Q9UF72 201 aa7.71□□□□□ -1.18
CNKSR1-203ENST00000465415 DPM2O94777 84 aa7.7□□□□□ -1.18
CNKSR1-203ENST00000465415 IGLV7-43P04211 117 aa7.7□□□□□ -1.18
CNKSR1-203ENST00000465415 REG3GQ6UW15 175 aa7.7□□□□□ -1.18
CNKSR1-203ENST00000465415 MRPL55Q7Z7F7 128 aaKnown RBP7.7□□□□□ -1.18
CNKSR1-203ENST00000465415 PLA2G2DQ9UNK4 145 aa7.7□□□□□ -1.18
CNKSR1-203ENST00000465415 NKAPP1Q8N9T2 125 aa7.69□□□□□ -1.18
CNKSR1-203ENST00000465415 PMCHL2Q9BQD1 86 aa7.69□□□□□ -1.18
CNKSR1-203ENST00000465415 SND1-IT1Q9HBX3 110 aa7.69□□□□□ -1.18
CNKSR1-203ENST00000465415 IGLV5-37A0A075B6J1 123 aa7.68□□□□□ -1.18
CNKSR1-203ENST00000465415 IGKCP01834 107 aa7.67□□□□□ -1.18
CNKSR1-203ENST00000465415 MT1HL1P0DM35 61 aa7.67□□□□□ -1.18
CNKSR1-203ENST00000465415 LINC00158P58513 81 aa7.67□□□□□ -1.18
CNKSR1-203ENST00000465415 HERVK_113P61574 105 aa7.67□□□□□ -1.18
CNKSR1-203ENST00000465415 HERV-K104P63124 156 aa7.67□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 50 ms