RNA–Protein interactions for RNA: ENST00000464304.1

HMG20B-208, Transcript of high mobility group 20B, humanhuman

TSL 2

Gene HMG20B, Length 881 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMG20B-208ENST00000464304 C10orf25Q5T742 122 aa11.98□□□□□ -0.49
HMG20B-208ENST00000464304 CHTOPQ9Y3Y2 248 aaKnown RBP11.98□□□□□ -0.49
HMG20B-208ENST00000464304 C11orf86A6NJI1 115 aa11.97□□□□□ -0.49
HMG20B-208ENST00000464304 F8WDY8 70 aa11.97□□□□□ -0.49
HMG20B-208ENST00000464304 H0Y8G0 127 aa11.97□□□□□ -0.49
HMG20B-208ENST00000464304 SPINK8P0C7L1 97 aa11.97□□□□□ -0.49
HMG20B-208ENST00000464304 ZNF22P17026 224 aaPredicted RBP11.97□□□□□ -0.49
HMG20B-208ENST00000464304 S100A2P29034 98 aa11.97□□□□□ -0.49
HMG20B-208ENST00000464304 UNQ6190/PRO20217Q6UXQ8 127 aa11.97□□□□□ -0.49
HMG20B-208ENST00000464304 C2orf82Q6UX34 121 aa11.96□□□□□ -0.49
HMG20B-208ENST00000464304 Q8IZM0 81 aa11.96□□□□□ -0.49
HMG20B-208ENST00000464304 HIST3H2BBQ8N257 126 aa11.96□□□□□ -0.49
HMG20B-208ENST00000464304 CIRBP-AS1Q8TBR5 109 aa11.96□□□□□ -0.49
HMG20B-208ENST00000464304 MRPL35Q9NZE8 188 aaKnown RBP11.96□□□□□ -0.49
HMG20B-208ENST00000464304 A0A096LNI7 61 aa11.95□□□□□ -0.5
HMG20B-208ENST00000464304 IGKV2-24A0A0C4DH68 120 aa11.95□□□□□ -0.5
HMG20B-208ENST00000464304 H3BRM9 83 aa11.95□□□□□ -0.5
HMG20B-208ENST00000464304 PRSS2P07478 247 aa11.95□□□□□ -0.5
HMG20B-208ENST00000464304 CIRBPQ14011 172 aaKnown RBP11.95□□□□□ -0.5
HMG20B-208ENST00000464304 C6orf48Q9UBA6 75 aa11.95□□□□□ -0.5
HMG20B-208ENST00000464304 F8VRH5 84 aa11.94□□□□□ -0.5
HMG20B-208ENST00000464304 J3QL48 77 aa11.94□□□□□ -0.5
HMG20B-208ENST00000464304 SMR3BP02814 79 aaPredicted RBP11.94□□□□□ -0.5
HMG20B-208ENST00000464304 SNRPEP62304 92 aaKnown RBP11.94□□□□□ -0.5
HMG20B-208ENST00000464304 RNF151Q2KHN1 245 aa11.94□□□□□ -0.5
HMG20B-208ENST00000464304 Q8N1X5 172 aa11.94□□□□□ -0.5
HMG20B-208ENST00000464304 SPACA4Q8TDM5 124 aa11.94□□□□□ -0.5
HMG20B-208ENST00000464304 LOC107984640A0A0U1RRK4 108 aa11.93□□□□□ -0.5
HMG20B-208ENST00000464304 C5orf52A6NGY3 159 aa11.93□□□□□ -0.5
HMG20B-208ENST00000464304 ODF1Q14990 250 aa11.93□□□□□ -0.5
HMG20B-208ENST00000464304 PKIGQ9Y2B9 76 aa11.93□□□□□ -0.5
HMG20B-208ENST00000464304 SYS1-DBNDD2H3BUS1 97 aa11.92□□□□□ -0.5
HMG20B-208ENST00000464304 C6orf226Q5I0X4 101 aa11.92□□□□□ -0.5
HMG20B-208ENST00000464304 TMEM170BQ5T4T1 132 aa11.92□□□□□ -0.5
HMG20B-208ENST00000464304 COX7B2Q8TF08 81 aa11.92□□□□□ -0.5
HMG20B-208ENST00000464304 CKS1BP61024 79 aa11.91□□□□□ -0.5
HMG20B-208ENST00000464304 LINC00528Q8N1L1 170 aa11.91□□□□□ -0.5
HMG20B-208ENST00000464304 HIST1H2BLQ99880 126 aa11.91□□□□□ -0.5
HMG20B-208ENST00000464304 TRBV30A0A0K0K1B3 111 aa11.9□□□□□ -0.5
HMG20B-208ENST00000464304 PLNP26678 52 aa11.9□□□□□ -0.5
HMG20B-208ENST00000464304 KRTDAPP60985 99 aa11.9□□□□□ -0.5
HMG20B-208ENST00000464304 RPL18AQ02543 176 aaKnown RBP11.9□□□□□ -0.5
HMG20B-208ENST00000464304 GAGE2BQ13066 116 aa11.9□□□□□ -0.5
HMG20B-208ENST00000464304 MAJINQ3KP22 176 aa11.9□□□□□ -0.5
HMG20B-208ENST00000464304 PET117Q6UWS5 81 aa11.9□□□□□ -0.5
HMG20B-208ENST00000464304 A0A087WYN8 130 aa11.89□□□□□ -0.51
HMG20B-208ENST00000464304 IGLV5-39A0A0G2JS06 123 aa11.89□□□□□ -0.51
HMG20B-208ENST00000464304 C3orf79P0CE67 100 aa11.89□□□□□ -0.51
HMG20B-208ENST00000464304 PTTG1IPP53801 180 aa11.89□□□□□ -0.51
HMG20B-208ENST00000464304 DPH3Q96FX2 82 aa11.89□□□□□ -0.51
HMG20B-208ENST00000464304 CXCL5P42830 114 aa11.88□□□□□ -0.51
HMG20B-208ENST00000464304 C9orf116Q5BN46 136 aaPredicted RBP11.88□□□□□ -0.51
HMG20B-208ENST00000464304 DPM2O94777 84 aa11.87□□□□□ -0.51
HMG20B-208ENST00000464304 TLX1NBP0CAT3 122 aa11.87□□□□□ -0.51
HMG20B-208ENST00000464304 C21orf62-AS1Q17RA5 79 aa11.87□□□□□ -0.51
HMG20B-208ENST00000464304 TMEM223A0PJW6 202 aa11.86□□□□□ -0.51
HMG20B-208ENST00000464304 C20orf202A1L168 122 aa11.86□□□□□ -0.51
HMG20B-208ENST00000464304 LINC01545Q5VT33 79 aa11.86□□□□□ -0.51
HMG20B-208ENST00000464304 PMCHL2Q9BQD1 86 aa11.86□□□□□ -0.51
HMG20B-208ENST00000464304 IGKCP01834 107 aa11.85□□□□□ -0.51
HMG20B-208ENST00000464304 Q5VSD8 79 aa11.85□□□□□ -0.51
HMG20B-208ENST00000464304 Q6ZRP5 223 aa11.85□□□□□ -0.51
HMG20B-208ENST00000464304 STPG4Q8N801 248 aa11.85□□□□□ -0.51
HMG20B-208ENST00000464304 PLAC8Q9NZF1 115 aa11.85□□□□□ -0.51
HMG20B-208ENST00000464304 LINC00474Q9P2X8 69 aa11.85□□□□□ -0.51
HMG20B-208ENST00000464304 EPM2AB3EWF7 344 aa11.84□□□□□ -0.51
HMG20B-208ENST00000464304 DMBT1Q9UGM3 2413 aaPredicted RBP11.84□□□□□ -0.51
HMG20B-208ENST00000464304 AKR1D1P51857 326 aa11.83□□□□□ -0.52
HMG20B-208ENST00000464304 GAGE2EQ4V326 116 aa11.83□□□□□ -0.52
HMG20B-208ENST00000464304 GAGE2DQ9UEU5 116 aa11.83□□□□□ -0.52
HMG20B-208ENST00000464304 NDUFC2-KCTD14E9PQ53 114 aa11.82□□□□□ -0.52
HMG20B-208ENST00000464304 FAM229AH3BQW9 127 aa11.81□□□□□ -0.52
HMG20B-208ENST00000464304 A0A1W2PNN7 141 aa11.79□□□□□ -0.52
HMG20B-208ENST00000464304 HERVK_113P61574 105 aa11.79□□□□□ -0.52
HMG20B-208ENST00000464304 FAT1Q14517 4588 aa11.78□□□□□ -0.52
HMG20B-208ENST00000464304 C9orf129Q5T035 196 aaKnown RBP11.77□□□□□ -0.53
HMG20B-208ENST00000464304 FAM168BA1KXE4 195 aa11.76□□□□□ -0.53
HMG20B-208ENST00000464304 ZNF625Q96I27 306 aaPredicted RBP11.76□□□□□ -0.53
HMG20B-208ENST00000464304 XAGE1AQ9HD64 81 aa11.75□□□□□ -0.53
HMG20B-208ENST00000464304 PLA2G1BP04054 148 aaKnown RBP11.74□□□□□ -0.53
HMG20B-208ENST00000464304 SFTA2Q6UW10 78 aa11.74□□□□□ -0.53
HMG20B-208ENST00000464304 MYCBP2O75592 4640 aa11.74□□□□□ -0.53
HMG20B-208ENST00000464304 LEPROTO15243 131 aa11.73□□□□□ -0.53
HMG20B-208ENST00000464304 PFN2P35080 140 aa11.73□□□□□ -0.53
HMG20B-208ENST00000464304 TSPEAR-AS2P59090 65 aa11.73□□□□□ -0.53
HMG20B-208ENST00000464304 KRTAP10-4P60372 401 aaPredicted RBP11.73□□□□□ -0.53
HMG20B-208ENST00000464304 RPL37AP61513 92 aaKnown RBP11.73□□□□□ -0.53
HMG20B-208ENST00000464304 FAM19A5Q7Z5A7 132 aaPredicted RBP11.73□□□□□ -0.53
HMG20B-208ENST00000464304 KRTAP7-1Q8IUC3 87 aa11.73□□□□□ -0.53
HMG20B-208ENST00000464304 PLEKHB2Q96CS7 222 aa11.73□□□□□ -0.53
HMG20B-208ENST00000464304 ERG28Q9UKR5 140 aa11.73□□□□□ -0.53
HMG20B-208ENST00000464304 FLG2Q5D862 2391 aaPredicted RBP11.72□□□□□ -0.53
HMG20B-208ENST00000464304 SCGB1D1O95968 90 aa11.72□□□□□ -0.53
HMG20B-208ENST00000464304 INAFM2P0DMQ5 153 aa11.72□□□□□ -0.53
HMG20B-208ENST00000464304 E9PLD3 99 aa11.71□□□□□ -0.53
HMG20B-208ENST00000464304 ATOH7Q8N100 152 aa11.71□□□□□ -0.53
HMG20B-208ENST00000464304 C7orf33Q8WU49 177 aa11.71□□□□□ -0.53
HMG20B-208ENST00000464304 VPS13BQ7Z7G8 4022 aa11.71□□□□□ -0.54
HMG20B-208ENST00000464304 PHF5AQ7RTV0 110 aaKnown RBP11.7□□□□□ -0.54
HMG20B-208ENST00000464304 NDUFA12Q9UI09 145 aa11.7□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms