RNA–Protein interactions for RNA: ENST00000463446.1

EPHA4-210, Transcript of EPH receptor A4, humanhuman

TSL 2

Gene EPHA4, Length 579 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EPHA4-210ENST00000463446 TMEM238C9JI98 176 aa4.9□□□□□ -1.63
EPHA4-210ENST00000463446 TIMM17BO60830 172 aa4.9□□□□□ -1.63
EPHA4-210ENST00000463446 COX8AP10176 69 aa4.9□□□□□ -1.63
EPHA4-210ENST00000463446 ATOH7Q8N100 152 aa4.9□□□□□ -1.63
EPHA4-210ENST00000463446 UQCR10Q9UDW1 63 aa4.9□□□□□ -1.63
EPHA4-210ENST00000463446 PAM16Q9Y3D7 125 aa4.9□□□□□ -1.63
EPHA4-210ENST00000463446 A0A0J9YXY3 114 aa4.89□□□□□ -1.63
EPHA4-210ENST00000463446 ZNF815PA8K554 130 aa4.89□□□□□ -1.63
EPHA4-210ENST00000463446 SRSF9Q13242 221 aaKnown RBP eCLIP4.89□□□□□ -1.63
EPHA4-210ENST00000463446 MEIG1Q5JSS6 88 aa4.89□□□□□ -1.63
EPHA4-210ENST00000463446 Q8N814 137 aa4.89□□□□□ -1.63
EPHA4-210ENST00000463446 CARD19Q96LW7 228 aa4.89□□□□□ -1.63
EPHA4-210ENST00000463446 C12orf57Q99622 126 aa4.89□□□□□ -1.63
EPHA4-210ENST00000463446 KRTAP1-5Q9BYS1 174 aa4.89□□□□□ -1.63
EPHA4-210ENST00000463446 CBY1Q9Y3M2 126 aa4.89□□□□□ -1.63
EPHA4-210ENST00000463446 TGP01266 2768 aa4.89□□□□□ -1.63
EPHA4-210ENST00000463446 A0A087WTM6 91 aa4.88□□□□□ -1.63
EPHA4-210ENST00000463446 LRCOL1A6NCL2 159 aa4.88□□□□□ -1.63
EPHA4-210ENST00000463446 IFITM1P13164 125 aa4.88□□□□□ -1.63
EPHA4-210ENST00000463446 LINC00158P58513 81 aa4.88□□□□□ -1.63
EPHA4-210ENST00000463446 KIAA0087Q14695 138 aa4.88□□□□□ -1.63
EPHA4-210ENST00000463446 Q6ZRN7 208 aaPredicted RBP4.88□□□□□ -1.63
EPHA4-210ENST00000463446 MIEN1Q9BRT3 115 aa4.88□□□□□ -1.63
EPHA4-210ENST00000463446 PPDPFQ9H3Y8 114 aa4.88□□□□□ -1.63
EPHA4-210ENST00000463446 HIGD1BQ9P298 99 aa4.88□□□□□ -1.63
EPHA4-210ENST00000463446 LOC107984640A0A0U1RRK4 108 aa4.87□□□□□ -1.63
EPHA4-210ENST00000463446 TMEM238LA0A1B0GVL6 79 aa4.87□□□□□ -1.63
EPHA4-210ENST00000463446 TLX1NBP0CAT3 122 aa4.87□□□□□ -1.63
EPHA4-210ENST00000463446 TAL2Q16559 108 aa4.87□□□□□ -1.63
EPHA4-210ENST00000463446 HIGD2BQ4VC39 106 aa4.87□□□□□ -1.63
EPHA4-210ENST00000463446 LINC00518Q8N0U6 118 aa4.87□□□□□ -1.63
EPHA4-210ENST00000463446 MAPKAPK5-AS1Q8N8E1 139 aa4.87□□□□□ -1.63
EPHA4-210ENST00000463446 C15orf56Q8N910 161 aa4.87□□□□□ -1.63
EPHA4-210ENST00000463446 C9orf163Q8N9P6 203 aa4.87□□□□□ -1.63
EPHA4-210ENST00000463446 DPH3Q96FX2 82 aa4.87□□□□□ -1.63
EPHA4-210ENST00000463446 ZNF625Q96I27 306 aaPredicted RBP4.87□□□□□ -1.63
EPHA4-210ENST00000463446 IGLV5-52A0A0A0MRZ9 124 aa4.86□□□□□ -1.63
EPHA4-210ENST00000463446 NDUFC2-KCTD14E9PQ53 114 aa4.86□□□□□ -1.63
EPHA4-210ENST00000463446 PTTG1IPP53801 180 aa4.86□□□□□ -1.63
EPHA4-210ENST00000463446 RPL24P83731 157 aaKnown RBP4.86□□□□□ -1.63
EPHA4-210ENST00000463446 ANKRD39Q53RE8 183 aa4.86□□□□□ -1.63
EPHA4-210ENST00000463446 C14orf144Q96I85 54 aa4.86□□□□□ -1.63
EPHA4-210ENST00000463446 ERG28Q9UKR5 140 aa4.86□□□□□ -1.63
EPHA4-210ENST00000463446 UNQ6190/PRO20217Q6UXQ8 127 aa4.85□□□□□ -1.63
EPHA4-210ENST00000463446 HIST1H4GQ99525 98 aa4.85□□□□□ -1.63
EPHA4-210ENST00000463446 SPANXB1Q9NS25 103 aaPredicted RBP4.85□□□□□ -1.63
EPHA4-210ENST00000463446 PRKDCP78527 4128 aaKnown RBP4.85□□□□□ -1.63
EPHA4-210ENST00000463446 LOC107984156A0A0G2JMH3 177 aa4.84□□□□□ -1.63
EPHA4-210ENST00000463446 C16orf90A8MZG2 172 aa4.84□□□□□ -1.63
EPHA4-210ENST00000463446 LECT2O14960 151 aa4.84□□□□□ -1.63
EPHA4-210ENST00000463446 RTL8CO15255 209 aa4.84□□□□□ -1.63
EPHA4-210ENST00000463446 PFN2P35080 140 aa4.84□□□□□ -1.63
EPHA4-210ENST00000463446 ARL17AQ8IVW1 177 aa4.84□□□□□ -1.63
EPHA4-210ENST00000463446 KRTAP4-8Q9BYQ9 185 aa4.84□□□□□ -1.63
EPHA4-210ENST00000463446 IGKV2D-26A0A0A0MRZ7 120 aa4.83□□□□□ -1.64
EPHA4-210ENST00000463446 M0R143 59 aa4.83□□□□□ -1.64
EPHA4-210ENST00000463446 HNRNPA3P51991 378 aaKnown RBP4.83□□□□□ -1.64
EPHA4-210ENST00000463446 MAJINQ3KP22 176 aa4.83□□□□□ -1.64
EPHA4-210ENST00000463446 C2orf82Q6UX34 121 aa4.83□□□□□ -1.64
EPHA4-210ENST00000463446 Q6ZRU5 148 aa4.83□□□□□ -1.64
EPHA4-210ENST00000463446 PCP2Q8IVA1 136 aa4.83□□□□□ -1.64
EPHA4-210ENST00000463446 SPANXDQ9BXN6 97 aa4.83□□□□□ -1.64
EPHA4-210ENST00000463446 SPANXCQ9NY87 97 aa4.83□□□□□ -1.64
EPHA4-210ENST00000463446 TP73-AS1Q9UF72 201 aa4.83□□□□□ -1.64
EPHA4-210ENST00000463446 TENM2Q9NT68 2774 aa4.82□□□□□ -1.64
EPHA4-210ENST00000463446 IGLV2-33A0A075B6J2 118 aaPredicted RBP4.82□□□□□ -1.64
EPHA4-210ENST00000463446 NDUFC2O95298 119 aa4.82□□□□□ -1.64
EPHA4-210ENST00000463446 SMIM13P0DJ93 91 aa4.82□□□□□ -1.64
EPHA4-210ENST00000463446 TNP2Q05952 138 aa4.82□□□□□ -1.64
EPHA4-210ENST00000463446 LBHQ53QV2 105 aaPredicted RBP4.82□□□□□ -1.64
EPHA4-210ENST00000463446 C6orf48Q9UBA6 75 aa4.82□□□□□ -1.64
EPHA4-210ENST00000463446 PLA2G2DQ9UNK4 145 aa4.82□□□□□ -1.64
EPHA4-210ENST00000463446 SNCGO76070 127 aa4.81□□□□□ -1.64
EPHA4-210ENST00000463446 RPL18AQ02543 176 aaKnown RBP4.81□□□□□ -1.64
EPHA4-210ENST00000463446 GAGE2BQ13066 116 aa4.81□□□□□ -1.64
EPHA4-210ENST00000463446 SDIM1Q6ZPB5 146 aa4.81□□□□□ -1.64
EPHA4-210ENST00000463446 TRAV13-2A0A0B4J235 113 aa4.8□□□□□ -1.64
EPHA4-210ENST00000463446 TRBV10-2A0A0K0K1G8 114 aa4.8□□□□□ -1.64
EPHA4-210ENST00000463446 A6NDN8 102 aa4.8□□□□□ -1.64
EPHA4-210ENST00000463446 TSPEAR-AS2P59090 65 aa4.8□□□□□ -1.64
EPHA4-210ENST00000463446 HSD52Q0P140 79 aa4.8□□□□□ -1.64
EPHA4-210ENST00000463446 GAGE2EQ4V326 116 aa4.8□□□□□ -1.64
EPHA4-210ENST00000463446 C10orf25Q5T742 122 aa4.8□□□□□ -1.64
EPHA4-210ENST00000463446 MIR7-3HGQ8N6C7 128 aa4.8□□□□□ -1.64
EPHA4-210ENST00000463446 LINC00526Q96FQ7 95 aa4.8□□□□□ -1.64
EPHA4-210ENST00000463446 SND1-IT1Q9HBX3 110 aa4.8□□□□□ -1.64
EPHA4-210ENST00000463446 GAGE2DQ9UEU5 116 aa4.8□□□□□ -1.64
EPHA4-210ENST00000463446 SLPIP03973 132 aa4.79□□□□□ -1.64
EPHA4-210ENST00000463446 HINT1P49773 126 aaPredicted RBP4.79□□□□□ -1.64
EPHA4-210ENST00000463446 CEND1Q8N111 149 aa4.79□□□□□ -1.64
EPHA4-210ENST00000463446 NKAPP1Q8N9T2 125 aa4.79□□□□□ -1.64
EPHA4-210ENST00000463446 LINC00308Q8TCZ7 52 aa4.79□□□□□ -1.64
EPHA4-210ENST00000463446 TMEM126AQ9H061 195 aa4.79□□□□□ -1.64
EPHA4-210ENST00000463446 A0A0U1RRA0 63 aa4.78□□□□□ -1.64
EPHA4-210ENST00000463446 DDTP30046 118 aa4.78□□□□□ -1.64
EPHA4-210ENST00000463446 C9orf116Q5BN46 136 aaPredicted RBP4.78□□□□□ -1.64
EPHA4-210ENST00000463446 S100A7L2Q5SY68 101 aa4.78□□□□□ -1.64
EPHA4-210ENST00000463446 Q6ZRP5 223 aa4.78□□□□□ -1.64
EPHA4-210ENST00000463446 MUSTN1Q8IVN3 82 aa4.78□□□□□ -1.64
EPHA4-210ENST00000463446 PRO1933Q9H354 126 aa4.78□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 53.9 ms