RNA–Protein interactions for RNA: ENST00000463343.1

SF1-212, Transcript of splicing factor 1, humanhuman

TSL 2

Gene SF1, Length 983 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF1-212ENST00000463343 LINC00528Q8N1L1 170 aa11.23□□□□□ -0.61
SF1-212ENST00000463343 IFI27L1Q96BM0 104 aa11.23□□□□□ -0.61
SF1-212ENST00000463343 PACRGQ96M98 296 aaPredicted RBP11.23□□□□□ -0.61
SF1-212ENST00000463343 TOMM7Q9P0U1 55 aa11.23□□□□□ -0.61
SF1-212ENST00000463343 SMIM1B2RUZ4 78 aa11.22□□□□□ -0.61
SF1-212ENST00000463343 HIST1H2BKO60814 126 aa11.22□□□□□ -0.61
SF1-212ENST00000463343 ATP6V1G1O75348 118 aa11.22□□□□□ -0.61
SF1-212ENST00000463343 HIST1H2BJP06899 126 aa11.22□□□□□ -0.61
SF1-212ENST00000463343 HIST1H2BOP23527 126 aa11.22□□□□□ -0.61
SF1-212ENST00000463343 HIST1H2BBP33778 126 aa11.22□□□□□ -0.61
SF1-212ENST00000463343 HIST1H2BDP58876 126 aa11.22□□□□□ -0.61
SF1-212ENST00000463343 HIST1H2BCP62807 126 aa11.22□□□□□ -0.61
SF1-212ENST00000463343 HIST2H2BEQ16778 126 aa11.22□□□□□ -0.61
SF1-212ENST00000463343 MAJINQ3KP22 176 aa11.22□□□□□ -0.61
SF1-212ENST00000463343 HIST2H2BFQ5QNW6 126 aaPredicted RBP11.22□□□□□ -0.61
SF1-212ENST00000463343 HIST1H2BHQ93079 126 aa11.22□□□□□ -0.61
SF1-212ENST00000463343 HIST1H2BNQ99877 126 aa11.22□□□□□ -0.61
SF1-212ENST00000463343 HIST1H2BMQ99879 126 aa11.22□□□□□ -0.61
SF1-212ENST00000463343 C6orf48Q9UBA6 75 aa11.22□□□□□ -0.61
SF1-212ENST00000463343 PRSS2P07478 247 aa11.21□□□□□ -0.61
SF1-212ENST00000463343 C6orf226Q5I0X4 101 aa11.21□□□□□ -0.61
SF1-212ENST00000463343 Q8IZM0 81 aa11.21□□□□□ -0.61
SF1-212ENST00000463343 PKIGQ9Y2B9 76 aa11.21□□□□□ -0.61
SF1-212ENST00000463343 SPINK8P0C7L1 97 aa11.2□□□□□ -0.62
SF1-212ENST00000463343 GAGE2BQ13066 116 aa11.2□□□□□ -0.62
SF1-212ENST00000463343 PLAC8Q9NZF1 115 aa11.2□□□□□ -0.62
SF1-212ENST00000463343 CHTOPQ9Y3Y2 248 aaKnown RBP11.2□□□□□ -0.62
SF1-212ENST00000463343 TRAV12-1A0A0B4J245 112 aa11.19□□□□□ -0.62
SF1-212ENST00000463343 ZNF22P17026 224 aaPredicted RBP11.19□□□□□ -0.62
SF1-212ENST00000463343 PTTG1IPP53801 180 aa11.19□□□□□ -0.62
SF1-212ENST00000463343 C11orf86A6NJI1 115 aa11.18□□□□□ -0.62
SF1-212ENST00000463343 H3BRM9 83 aa11.18□□□□□ -0.62
SF1-212ENST00000463343 LEPROTL1O95214 131 aa11.18□□□□□ -0.62
SF1-212ENST00000463343 LINC00474Q9P2X8 69 aa11.18□□□□□ -0.62
SF1-212ENST00000463343 TRBV30A0A0K0K1B3 111 aa11.17□□□□□ -0.62
SF1-212ENST00000463343 OXTP01178 125 aa11.17□□□□□ -0.62
SF1-212ENST00000463343 TLX1NBP0CAT3 122 aa11.17□□□□□ -0.62
SF1-212ENST00000463343 CKS1BP61024 79 aa11.17□□□□□ -0.62
SF1-212ENST00000463343 STPG4Q8N801 248 aa11.17□□□□□ -0.62
SF1-212ENST00000463343 COX7B2Q8TF08 81 aa11.17□□□□□ -0.62
SF1-212ENST00000463343 FABP4P15090 132 aa11.16□□□□□ -0.62
SF1-212ENST00000463343 RPL18AQ02543 176 aaKnown RBP11.16□□□□□ -0.62
SF1-212ENST00000463343 C9orf116Q5BN46 136 aaPredicted RBP11.16□□□□□ -0.62
SF1-212ENST00000463343 IGLV5-39A0A0G2JS06 123 aa11.15□□□□□ -0.62
SF1-212ENST00000463343 KRTAP10-4P60372 401 aaPredicted RBP11.15□□□□□ -0.62
SF1-212ENST00000463343 Q6ZRP5 223 aa11.15□□□□□ -0.62
SF1-212ENST00000463343 LRP1Q07954 4544 aaKnown RBP11.15□□□□□ -0.63
SF1-212ENST00000463343 A0A1W2PNN7 141 aa11.13□□□□□ -0.63
SF1-212ENST00000463343 F8VRH5 84 aa11.13□□□□□ -0.63
SF1-212ENST00000463343 TMEM170BQ5T4T1 132 aa11.13□□□□□ -0.63
SF1-212ENST00000463343 HSPB8Q9UJY1 196 aa11.13□□□□□ -0.63
SF1-212ENST00000463343 CXCL5P42830 114 aa11.12□□□□□ -0.63
SF1-212ENST00000463343 ODF1Q14990 250 aa11.12□□□□□ -0.63
SF1-212ENST00000463343 HMCN2Q8NDA2 5059 aa11.11□□□□□ -0.63
SF1-212ENST00000463343 H0Y8G0 127 aa11.11□□□□□ -0.63
SF1-212ENST00000463343 GAGE2EQ4V326 116 aa11.11□□□□□ -0.63
SF1-212ENST00000463343 GAGE2DQ9UEU5 116 aa11.11□□□□□ -0.63
SF1-212ENST00000463343 NDUFC2-KCTD14E9PQ53 114 aa11.1□□□□□ -0.63
SF1-212ENST00000463343 COA6Q5JTJ3 125 aaKnown RBP11.1□□□□□ -0.63
SF1-212ENST00000463343 TMEM223A0PJW6 202 aa11.09□□□□□ -0.63
SF1-212ENST00000463343 RPL37AP61513 92 aaKnown RBP11.09□□□□□ -0.63
SF1-212ENST00000463343 FAT3Q8TDW7 4589 aa11.08□□□□□ -0.64
SF1-212ENST00000463343 FAM168BA1KXE4 195 aa11.06□□□□□ -0.64
SF1-212ENST00000463343 C9orf129Q5T035 196 aaKnown RBP11.06□□□□□ -0.64
SF1-212ENST00000463343 MAP1LC3CQ9BXW4 147 aa11.06□□□□□ -0.64
SF1-212ENST00000463343 KRTAP7-1Q8IUC3 87 aa11.05□□□□□ -0.64
SF1-212ENST00000463343 C7orf33Q8WU49 177 aa11.05□□□□□ -0.64
SF1-212ENST00000463343 PMCHL2Q9BQD1 86 aa11.05□□□□□ -0.64
SF1-212ENST00000463343 PLA2G2DQ9UNK4 145 aa11.04□□□□□ -0.64
SF1-212ENST00000463343 UBR4Q5T4S7 5183 aa11.03□□□□□ -0.64
SF1-212ENST00000463343 DPM2O94777 84 aa11.03□□□□□ -0.64
SF1-212ENST00000463343 XAGE1AQ9HD64 81 aa11.03□□□□□ -0.64
SF1-212ENST00000463343 SYS1-DBNDD2H3BUS1 97 aa11.02□□□□□ -0.65
SF1-212ENST00000463343 PLNP26678 52 aa11.02□□□□□ -0.65
SF1-212ENST00000463343 PHF5AQ7RTV0 110 aaKnown RBP11.02□□□□□ -0.65
SF1-212ENST00000463343 ZNF625Q96I27 306 aaPredicted RBP11.02□□□□□ -0.65
SF1-212ENST00000463343 FAM19A5Q7Z5A7 132 aaPredicted RBP11.01□□□□□ -0.65
SF1-212ENST00000463343 IGKCP01834 107 aa11□□□□□ -0.65
SF1-212ENST00000463343 HNRNPA3P51991 378 aaKnown RBP11□□□□□ -0.65
SF1-212ENST00000463343 PFN2P35080 140 aa10.99□□□□□ -0.65
SF1-212ENST00000463343 ERG28Q9UKR5 140 aa10.99□□□□□ -0.65
SF1-212ENST00000463343 SFTA2Q6UW10 78 aa10.98□□□□□ -0.65
SF1-212ENST00000463343 PET117Q6UWS5 81 aa10.98□□□□□ -0.65
SF1-212ENST00000463343 LEPROTO15243 131 aa10.97□□□□□ -0.65
SF1-212ENST00000463343 C3orf79P0CE67 100 aa10.97□□□□□ -0.65
SF1-212ENST00000463343 PRR3P79522 188 aaKnown RBP10.97□□□□□ -0.65
SF1-212ENST00000463343 LINC01545Q5VT33 79 aa10.97□□□□□ -0.65
SF1-212ENST00000463343 PKHD1L1Q86WI1 4243 aa10.96□□□□□ -0.65
SF1-212ENST00000463343 KRTAP11-1Q8IUC1 163 aa10.96□□□□□ -0.65
SF1-212ENST00000463343 M0QXV9 152 aa10.95□□□□□ -0.66
SF1-212ENST00000463343 TSPEAR-AS2P59090 65 aa10.95□□□□□ -0.66
SF1-212ENST00000463343 COX17Q14061 63 aa10.95□□□□□ -0.66
SF1-212ENST00000463343 PLEKHB2Q96CS7 222 aa10.95□□□□□ -0.66
SF1-212ENST00000463343 C22orf24Q9Y442 160 aa10.95□□□□□ -0.66
SF1-212ENST00000463343 KRTDAPP60985 99 aa10.94□□□□□ -0.66
SF1-212ENST00000463343 NDUFA12Q9UI09 145 aa10.94□□□□□ -0.66
SF1-212ENST00000463343 PSORS1C2Q9UIG4 136 aa10.94□□□□□ -0.66
SF1-212ENST00000463343 HERVK_113P61574 105 aa10.93□□□□□ -0.66
SF1-212ENST00000463343 J3QQQ9 107 aa10.92□□□□□ -0.66
SF1-212ENST00000463343 LINC00158P58513 81 aa10.92□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 122.4 ms