RNA–Protein interactions for RNA: ENST00000462352.5

CPNE1-221, Transcript of copine 1, humanhuman

TSL 2

Gene CPNE1, Length 625 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-221ENST00000462352 FAM30AQ9NZY2 134 aa7.58□□□□□ -1.2
CPNE1-221ENST00000462352 IGLV5-39A0A0G2JS06 123 aa7.57□□□□□ -1.2
CPNE1-221ENST00000462352 CKS1BP61024 79 aa7.57□□□□□ -1.2
CPNE1-221ENST00000462352 HIST3H2BBQ8N257 126 aa7.57□□□□□ -1.2
CPNE1-221ENST00000462352 RYR1P21817 5038 aa7.56□□□□□ -1.2
CPNE1-221ENST00000462352 TMEM223A0PJW6 202 aa7.56□□□□□ -1.2
CPNE1-221ENST00000462352 CDK2AP2O75956 126 aa7.56□□□□□ -1.2
CPNE1-221ENST00000462352 DPM2O94777 84 aa7.56□□□□□ -1.2
CPNE1-221ENST00000462352 C3orf79P0CE67 100 aa7.56□□□□□ -1.2
CPNE1-221ENST00000462352 PLNP26678 52 aa7.56□□□□□ -1.2
CPNE1-221ENST00000462352 SNRPEP62304 92 aaKnown RBP7.56□□□□□ -1.2
CPNE1-221ENST00000462352 RNF151Q2KHN1 245 aa7.56□□□□□ -1.2
CPNE1-221ENST00000462352 PET117Q6UWS5 81 aa7.56□□□□□ -1.2
CPNE1-221ENST00000462352 C6orf48Q9UBA6 75 aa7.56□□□□□ -1.2
CPNE1-221ENST00000462352 IGKCP01834 107 aa7.55□□□□□ -1.2
CPNE1-221ENST00000462352 S100A2P29034 98 aa7.55□□□□□ -1.2
CPNE1-221ENST00000462352 CXCL5P42830 114 aa7.55□□□□□ -1.2
CPNE1-221ENST00000462352 XGP55808 180 aa7.55□□□□□ -1.2
CPNE1-221ENST00000462352 KRTDAPP60985 99 aa7.55□□□□□ -1.2
CPNE1-221ENST00000462352 PKIGQ9Y2B9 76 aa7.55□□□□□ -1.2
CPNE1-221ENST00000462352 TMA7Q9Y2S6 64 aaKnown RBP7.55□□□□□ -1.2
CPNE1-221ENST00000462352 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP7.55□□□□□ -1.2
CPNE1-221ENST00000462352 TRBV30A0A0K0K1B3 111 aa7.54□□□□□ -1.2
CPNE1-221ENST00000462352 LOC107984640A0A0U1RRK4 108 aa7.54□□□□□ -1.2
CPNE1-221ENST00000462352 C5orf52A6NGY3 159 aa7.54□□□□□ -1.2
CPNE1-221ENST00000462352 PANO1I0J062 215 aa7.54□□□□□ -1.2
CPNE1-221ENST00000462352 HAMPP81172 84 aa7.54□□□□□ -1.2
CPNE1-221ENST00000462352 LINC01545Q5VT33 79 aa7.54□□□□□ -1.2
CPNE1-221ENST00000462352 HIST1H2BLQ99880 126 aa7.54□□□□□ -1.2
CPNE1-221ENST00000462352 A0A096LNI7 61 aa7.53□□□□□ -1.2
CPNE1-221ENST00000462352 IGKV2-24A0A0C4DH68 120 aa7.53□□□□□ -1.2
CPNE1-221ENST00000462352 CHTF8P0CG12 524 aa7.53□□□□□ -1.2
CPNE1-221ENST00000462352 CIRBPQ14011 172 aaKnown RBP7.53□□□□□ -1.2
CPNE1-221ENST00000462352 RPL18AQ02543 176 aaKnown RBP7.52□□□□□ -1.21
CPNE1-221ENST00000462352 C9orf116Q5BN46 136 aaPredicted RBP7.52□□□□□ -1.21
CPNE1-221ENST00000462352 SCXQ7RTU7 201 aa7.52□□□□□ -1.21
CPNE1-221ENST00000462352 SPACA4Q8TDM5 124 aa7.52□□□□□ -1.21
CPNE1-221ENST00000462352 HSPG2P98160 4391 aa7.52□□□□□ -1.21
CPNE1-221ENST00000462352 TLX1NBP0CAT3 122 aa7.51□□□□□ -1.21
CPNE1-221ENST00000462352 PTTG1IPP53801 180 aa7.51□□□□□ -1.21
CPNE1-221ENST00000462352 GAGE2BQ13066 116 aa7.51□□□□□ -1.21
CPNE1-221ENST00000462352 CIRBP-AS1Q8TBR5 109 aa7.51□□□□□ -1.21
CPNE1-221ENST00000462352 C20orf202A1L168 122 aa7.5□□□□□ -1.21
CPNE1-221ENST00000462352 HERVK_113P61574 105 aa7.5□□□□□ -1.21
CPNE1-221ENST00000462352 MAJINQ3KP22 176 aa7.5□□□□□ -1.21
CPNE1-221ENST00000462352 Q6ZRP5 223 aa7.5□□□□□ -1.21
CPNE1-221ENST00000462352 DPH3Q96FX2 82 aa7.5□□□□□ -1.21
CPNE1-221ENST00000462352 LINC00474Q9P2X8 69 aa7.5□□□□□ -1.21
CPNE1-221ENST00000462352 NDUFC2-KCTD14E9PQ53 114 aa7.49□□□□□ -1.21
CPNE1-221ENST00000462352 LEPROTO15243 131 aa7.49□□□□□ -1.21
CPNE1-221ENST00000462352 ZNF625Q96I27 306 aaPredicted RBP7.49□□□□□ -1.21
CPNE1-221ENST00000462352 HERC2O95714 4834 aa7.49□□□□□ -1.21
CPNE1-221ENST00000462352 A0A087WYN8 130 aa7.48□□□□□ -1.21
CPNE1-221ENST00000462352 TSPEAR-AS2P59090 65 aa7.48□□□□□ -1.21
CPNE1-221ENST00000462352 GAGE2EQ4V326 116 aa7.48□□□□□ -1.21
CPNE1-221ENST00000462352 SFTA2Q6UW10 78 aa7.48□□□□□ -1.21
CPNE1-221ENST00000462352 PLEKHB2Q96CS7 222 aa7.48□□□□□ -1.21
CPNE1-221ENST00000462352 GAGE2DQ9UEU5 116 aa7.48□□□□□ -1.21
CPNE1-221ENST00000462352 J3QQQ9 107 aa7.47□□□□□ -1.21
CPNE1-221ENST00000462352 STPG4Q8N801 248 aa7.47□□□□□ -1.21
CPNE1-221ENST00000462352 E9PLD3 99 aa7.46□□□□□ -1.22
CPNE1-221ENST00000462352 SMR3BP02814 79 aaPredicted RBP7.46□□□□□ -1.22
CPNE1-221ENST00000462352 PLAC8Q9NZF1 115 aa7.46□□□□□ -1.22
CPNE1-221ENST00000462352 NDUFA12Q9UI09 145 aa7.46□□□□□ -1.22
CPNE1-221ENST00000462352 ERG28Q9UKR5 140 aa7.46□□□□□ -1.22
CPNE1-221ENST00000462352 LGALS3P17931 250 aaKnown RBP7.45□□□□□ -1.22
CPNE1-221ENST00000462352 PFN2P35080 140 aa7.45□□□□□ -1.22
CPNE1-221ENST00000462352 AKR1D1P51857 326 aa7.45□□□□□ -1.22
CPNE1-221ENST00000462352 ATOH7Q8N100 152 aa7.45□□□□□ -1.22
CPNE1-221ENST00000462352 KRTAP17-1Q9BYP8 105 aa7.45□□□□□ -1.22
CPNE1-221ENST00000462352 FAT1Q14517 4588 aa7.45□□□□□ -1.22
CPNE1-221ENST00000462352 MYMXA0A1B0GTQ4 84 aa7.44□□□□□ -1.22
CPNE1-221ENST00000462352 A0A1W2PNN7 141 aa7.44□□□□□ -1.22
CPNE1-221ENST00000462352 HERV-K104P63124 156 aa7.44□□□□□ -1.22
CPNE1-221ENST00000462352 C9orf129Q5T035 196 aaKnown RBP7.44□□□□□ -1.22
CPNE1-221ENST00000462352 NMUP48645 174 aa7.43□□□□□ -1.22
CPNE1-221ENST00000462352 COX17Q14061 63 aa7.43□□□□□ -1.22
CPNE1-221ENST00000462352 Q8N1X5 172 aa7.43□□□□□ -1.22
CPNE1-221ENST00000462352 XAGE1AQ9HD64 81 aa7.43□□□□□ -1.22
CPNE1-221ENST00000462352 IGKV2D-26A0A0A0MRZ7 120 aa7.42□□□□□ -1.22
CPNE1-221ENST00000462352 FAM168BA1KXE4 195 aa7.42□□□□□ -1.22
CPNE1-221ENST00000462352 EPM2AB3EWF7 344 aa7.42□□□□□ -1.22
CPNE1-221ENST00000462352 SMCPP49901 116 aaPredicted RBP7.42□□□□□ -1.22
CPNE1-221ENST00000462352 MEIG1Q5JSS6 88 aa7.42□□□□□ -1.22
CPNE1-221ENST00000462352 LINC00528Q8N1L1 170 aa7.42□□□□□ -1.22
CPNE1-221ENST00000462352 A0A0U1RRA0 63 aa7.41□□□□□ -1.22
CPNE1-221ENST00000462352 SCGB1D1O95968 90 aa7.41□□□□□ -1.22
CPNE1-221ENST00000462352 SMIM13P0DJ93 91 aa7.41□□□□□ -1.22
CPNE1-221ENST00000462352 LINC00158P58513 81 aa7.41□□□□□ -1.22
CPNE1-221ENST00000462352 ANKRD39Q53RE8 183 aa7.41□□□□□ -1.22
CPNE1-221ENST00000462352 FAM19A5Q7Z5A7 132 aaPredicted RBP7.41□□□□□ -1.22
CPNE1-221ENST00000462352 J3QL48 77 aa7.4□□□□□ -1.22
CPNE1-221ENST00000462352 C4orf48Q5BLP8 95 aa7.4□□□□□ -1.22
CPNE1-221ENST00000462352 KRTAP7-1Q8IUC3 87 aa7.4□□□□□ -1.22
CPNE1-221ENST00000462352 LINC00587B1AMM8 73 aa7.39□□□□□ -1.23
CPNE1-221ENST00000462352 FAM229AH3BQW9 127 aa7.39□□□□□ -1.23
CPNE1-221ENST00000462352 SERTAD4-AS1Q5TG53 156 aa7.39□□□□□ -1.23
CPNE1-221ENST00000462352 Q5VSD8 79 aa7.39□□□□□ -1.23
CPNE1-221ENST00000462352 TTTY13Q9BZ97 58 aa7.39□□□□□ -1.23
CPNE1-221ENST00000462352 SND1-IT1Q9HBX3 110 aa7.39□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 159.3 ms