RNA–Protein interactions for RNA: ENST00000462335.1

PKP4-208, Transcript of plakophilin 4, humanhuman

TSL 4

Gene PKP4, Length 561 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKP4-208ENST00000462335 C2orf82Q6UX34 121 aa6.12□□□□□ -1.43
PKP4-208ENST00000462335 SPACA4Q8TDM5 124 aa6.12□□□□□ -1.43
PKP4-208ENST00000462335 GAGE2DQ9UEU5 116 aa6.12□□□□□ -1.43
PKP4-208ENST00000462335 LRP1BQ9NZR2 4599 aa6.11□□□□□ -1.43
PKP4-208ENST00000462335 A0A096LNJ9 63 aa6.11□□□□□ -1.43
PKP4-208ENST00000462335 F8VRH5 84 aa6.11□□□□□ -1.43
PKP4-208ENST00000462335 IGLC3P0DOY3 106 aa6.11□□□□□ -1.43
PKP4-208ENST00000462335 PTTG1IPP53801 180 aa6.11□□□□□ -1.43
PKP4-208ENST00000462335 RPL37AP61513 92 aaKnown RBP6.11□□□□□ -1.43
PKP4-208ENST00000462335 MAP1LC3CQ9BXW4 147 aa6.11□□□□□ -1.43
PKP4-208ENST00000462335 DNAH5Q8TE73 4624 aa6.11□□□□□ -1.43
PKP4-208ENST00000462335 KIAA1109Q2LD37 5005 aa6.1□□□□□ -1.43
PKP4-208ENST00000462335 TRAV12-1A0A0B4J245 112 aa6.1□□□□□ -1.43
PKP4-208ENST00000462335 C10orf25Q5T742 122 aa6.1□□□□□ -1.43
PKP4-208ENST00000462335 IGLV5-45A0A087WSX0 123 aa6.09□□□□□ -1.43
PKP4-208ENST00000462335 SMIM1B2RUZ4 78 aa6.09□□□□□ -1.43
PKP4-208ENST00000462335 NDUFC2-KCTD14E9PQ53 114 aa6.09□□□□□ -1.43
PKP4-208ENST00000462335 PANO1I0J062 215 aa6.09□□□□□ -1.43
PKP4-208ENST00000462335 ATP6V1G1O75348 118 aa6.09□□□□□ -1.43
PKP4-208ENST00000462335 KIAA0087Q14695 138 aa6.09□□□□□ -1.43
PKP4-208ENST00000462335 KRTAP17-1Q9BYP8 105 aa6.09□□□□□ -1.43
PKP4-208ENST00000462335 PLAC8Q9NZF1 115 aa6.09□□□□□ -1.43
PKP4-208ENST00000462335 C6orf48Q9UBA6 75 aa6.09□□□□□ -1.43
PKP4-208ENST00000462335 HIST1H2BKO60814 126 aa6.08□□□□□ -1.44
PKP4-208ENST00000462335 HIST1H2BJP06899 126 aa6.08□□□□□ -1.44
PKP4-208ENST00000462335 ZNF22P17026 224 aaPredicted RBP6.08□□□□□ -1.44
PKP4-208ENST00000462335 HIST1H2BOP23527 126 aa6.08□□□□□ -1.44
PKP4-208ENST00000462335 HIST1H2BBP33778 126 aa6.08□□□□□ -1.44
PKP4-208ENST00000462335 HIST1H2BDP58876 126 aa6.08□□□□□ -1.44
PKP4-208ENST00000462335 HIST1H2BCP62807 126 aa6.08□□□□□ -1.44
PKP4-208ENST00000462335 CIRBPQ14011 172 aaKnown RBP6.08□□□□□ -1.44
PKP4-208ENST00000462335 HIST2H2BEQ16778 126 aa6.08□□□□□ -1.44
PKP4-208ENST00000462335 HIST2H2BFQ5QNW6 126 aaPredicted RBP6.08□□□□□ -1.44
PKP4-208ENST00000462335 SFTA2Q6UW10 78 aa6.08□□□□□ -1.44
PKP4-208ENST00000462335 HIST1H2BHQ93079 126 aa6.08□□□□□ -1.44
PKP4-208ENST00000462335 HIST1H2BNQ99877 126 aa6.08□□□□□ -1.44
PKP4-208ENST00000462335 HIST1H2BMQ99879 126 aa6.08□□□□□ -1.44
PKP4-208ENST00000462335 C11orf86A6NJI1 115 aa6.07□□□□□ -1.44
PKP4-208ENST00000462335 TLX1NBP0CAT3 122 aa6.07□□□□□ -1.44
PKP4-208ENST00000462335 PLNP26678 52 aa6.07□□□□□ -1.44
PKP4-208ENST00000462335 HERVK_113P61574 105 aa6.07□□□□□ -1.44
PKP4-208ENST00000462335 C9orf116Q5BN46 136 aaPredicted RBP6.07□□□□□ -1.44
PKP4-208ENST00000462335 DPM2O94777 84 aa6.06□□□□□ -1.44
PKP4-208ENST00000462335 Q6ZRP5 223 aa6.06□□□□□ -1.44
PKP4-208ENST00000462335 FAM19A5Q7Z5A7 132 aaPredicted RBP6.06□□□□□ -1.44
PKP4-208ENST00000462335 NUPR1O60356 82 aa6.05□□□□□ -1.44
PKP4-208ENST00000462335 PFN2P35080 140 aa6.05□□□□□ -1.44
PKP4-208ENST00000462335 UBE2BP63146 152 aa6.05□□□□□ -1.44
PKP4-208ENST00000462335 KRTAP4-5Q9BYR2 181 aa6.05□□□□□ -1.44
PKP4-208ENST00000462335 HSPG2P98160 4391 aa6.05□□□□□ -1.44
PKP4-208ENST00000462335 RYR1P21817 5038 aa6.05□□□□□ -1.44
PKP4-208ENST00000462335 APOBP04114 4563 aaKnown RBP6.04□□□□□ -1.44
PKP4-208ENST00000462335 LINC00587B1AMM8 73 aa6.04□□□□□ -1.44
PKP4-208ENST00000462335 IGKCP01834 107 aa6.04□□□□□ -1.44
PKP4-208ENST00000462335 S100A6P06703 90 aa6.04□□□□□ -1.44
PKP4-208ENST00000462335 LINC00158P58513 81 aa6.04□□□□□ -1.44
PKP4-208ENST00000462335 LBHQ53QV2 105 aaPredicted RBP6.04□□□□□ -1.44
PKP4-208ENST00000462335 ZNF625Q96I27 306 aaPredicted RBP6.04□□□□□ -1.44
PKP4-208ENST00000462335 XAGE1AQ9HD64 81 aa6.04□□□□□ -1.44
PKP4-208ENST00000462335 IGLV5-39A0A0G2JS06 123 aa6.03□□□□□ -1.44
PKP4-208ENST00000462335 MYMXA0A1B0GTQ4 84 aa6.03□□□□□ -1.44
PKP4-208ENST00000462335 A0A1W2PNN7 141 aa6.03□□□□□ -1.44
PKP4-208ENST00000462335 TMEM223A0PJW6 202 aa6.03□□□□□ -1.44
PKP4-208ENST00000462335 C20orf202A1L168 122 aa6.03□□□□□ -1.44
PKP4-208ENST00000462335 S100A2P29034 98 aa6.03□□□□□ -1.44
PKP4-208ENST00000462335 ODF1Q14990 250 aa6.03□□□□□ -1.44
PKP4-208ENST00000462335 MEIG1Q5JSS6 88 aa6.03□□□□□ -1.44
PKP4-208ENST00000462335 PLEKHB2Q96CS7 222 aa6.03□□□□□ -1.44
PKP4-208ENST00000462335 PMCHL2Q9BQD1 86 aa6.03□□□□□ -1.44
PKP4-208ENST00000462335 HERC2O95714 4834 aa6.03□□□□□ -1.44
PKP4-208ENST00000462335 J3QL48 77 aa6.02□□□□□ -1.45
PKP4-208ENST00000462335 M0QXV9 152 aa6.02□□□□□ -1.45
PKP4-208ENST00000462335 LGALS3P17931 250 aaKnown RBP6.02□□□□□ -1.45
PKP4-208ENST00000462335 LINC00310P59036 64 aa6.02□□□□□ -1.45
PKP4-208ENST00000462335 KRTDAPP60985 99 aa6.02□□□□□ -1.45
PKP4-208ENST00000462335 COX17Q14061 63 aa6.02□□□□□ -1.45
PKP4-208ENST00000462335 NKAPP1Q8N9T2 125 aa6.02□□□□□ -1.45
PKP4-208ENST00000462335 ERG28Q9UKR5 140 aa6.02□□□□□ -1.45
PKP4-208ENST00000462335 FAM168BA1KXE4 195 aa6.01□□□□□ -1.45
PKP4-208ENST00000462335 SYS1-DBNDD2H3BUS1 97 aa6.01□□□□□ -1.45
PKP4-208ENST00000462335 HERV-K104P63124 156 aa6.01□□□□□ -1.45
PKP4-208ENST00000462335 RPL24P83731 157 aaKnown RBP6.01□□□□□ -1.45
PKP4-208ENST00000462335 PET117Q6UWS5 81 aa6.01□□□□□ -1.45
PKP4-208ENST00000462335 PHF5AQ7RTV0 110 aaKnown RBP6.01□□□□□ -1.45
PKP4-208ENST00000462335 A0A0U1RRA0 63 aa6□□□□□ -1.45
PKP4-208ENST00000462335 LEPROTO15243 131 aa6□□□□□ -1.45
PKP4-208ENST00000462335 AKR1D1P51857 326 aa6□□□□□ -1.45
PKP4-208ENST00000462335 C1orf137Q5JT78 98 aa6□□□□□ -1.45
PKP4-208ENST00000462335 NDUFA12Q9UI09 145 aa6□□□□□ -1.45
PKP4-208ENST00000462335 DNAH8Q96JB1 4490 aa5.99□□□□□ -1.45
PKP4-208ENST00000462335 C9orf129Q5T035 196 aaKnown RBP5.99□□□□□ -1.45
PKP4-208ENST00000462335 J3QQQ9 107 aa5.98□□□□□ -1.45
PKP4-208ENST00000462335 PRR3P79522 188 aaKnown RBP5.98□□□□□ -1.45
PKP4-208ENST00000462335 COA6Q5JTJ3 125 aaKnown RBP5.98□□□□□ -1.45
PKP4-208ENST00000462335 C22orf24Q9Y442 160 aa5.98□□□□□ -1.45
PKP4-208ENST00000462335 NMUP48645 174 aa5.97□□□□□ -1.45
PKP4-208ENST00000462335 MRPL55Q7Z7F7 128 aaKnown RBP5.97□□□□□ -1.45
PKP4-208ENST00000462335 MIEN1Q9BRT3 115 aa5.97□□□□□ -1.45
PKP4-208ENST00000462335 SND1-IT1Q9HBX3 110 aa5.97□□□□□ -1.45
PKP4-208ENST00000462335 PSORS1C2Q9UIG4 136 aa5.97□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms