RNA–Protein interactions for RNA: ENST00000462276.1

RTF1-202, Transcript of RTF1 homolog, Paf1/RNA polymerase II complex component, humanhuman

TSL 4

Gene RTF1, Length 485 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTF1-202ENST00000462276 RTL8CO15255 209 aa7.01□□□□□ -1.29
RTF1-202ENST00000462276 DLEU1O43261 78 aa7.01□□□□□ -1.29
RTF1-202ENST00000462276 CNBPP62633 177 aaKnown RBP7.01□□□□□ -1.29
RTF1-202ENST00000462276 RNF151Q2KHN1 245 aa7.01□□□□□ -1.29
RTF1-202ENST00000462276 MAJINQ3KP22 176 aa7.01□□□□□ -1.29
RTF1-202ENST00000462276 PKIGQ9Y2B9 76 aa7.01□□□□□ -1.29
RTF1-202ENST00000462276 IGKV2D-26A0A0A0MRZ7 120 aa7□□□□□ -1.29
RTF1-202ENST00000462276 TRBV30A0A0K0K1B3 111 aa7□□□□□ -1.29
RTF1-202ENST00000462276 COX8AP10176 69 aa7□□□□□ -1.29
RTF1-202ENST00000462276 SYCNQ0VAF6 134 aa7□□□□□ -1.29
RTF1-202ENST00000462276 HIGD2BQ4VC39 106 aa7□□□□□ -1.29
RTF1-202ENST00000462276 Q8N814 137 aa7□□□□□ -1.29
RTF1-202ENST00000462276 ZNF625Q96I27 306 aaPredicted RBP7□□□□□ -1.29
RTF1-202ENST00000462276 CAMK2N2Q96S95 79 aa7□□□□□ -1.29
RTF1-202ENST00000462276 C12orf57Q99622 126 aa7□□□□□ -1.29
RTF1-202ENST00000462276 ZNF815PA8K554 130 aa6.99□□□□□ -1.29
RTF1-202ENST00000462276 LECT2O14960 151 aa6.99□□□□□ -1.29
RTF1-202ENST00000462276 CIRBPQ14011 172 aaKnown RBP6.99□□□□□ -1.29
RTF1-202ENST00000462276 COX17Q14061 63 aa6.99□□□□□ -1.29
RTF1-202ENST00000462276 LINC00518Q8N0U6 118 aa6.99□□□□□ -1.29
RTF1-202ENST00000462276 TSPEAR-AS2P59090 65 aa6.98□□□□□ -1.29
RTF1-202ENST00000462276 WFDC2Q14508 124 aa6.98□□□□□ -1.29
RTF1-202ENST00000462276 SLC25A34Q6PIV7 304 aa6.98□□□□□ -1.29
RTF1-202ENST00000462276 BOD1L2Q8IYS8 172 aa6.98□□□□□ -1.29
RTF1-202ENST00000462276 CARD19Q96LW7 228 aa6.98□□□□□ -1.29
RTF1-202ENST00000462276 PGPEP1Q9NXJ5 209 aa6.98□□□□□ -1.29
RTF1-202ENST00000462276 HERC2O95714 4834 aa6.97□□□□□ -1.29
RTF1-202ENST00000462276 TIMM17BO60830 172 aa6.97□□□□□ -1.29
RTF1-202ENST00000462276 GCSHP23434 173 aa6.97□□□□□ -1.29
RTF1-202ENST00000462276 TNP2Q05952 138 aa6.97□□□□□ -1.29
RTF1-202ENST00000462276 CDPF1Q6NVV7 123 aa6.97□□□□□ -1.29
RTF1-202ENST00000462276 C2orf82Q6UX34 121 aa6.97□□□□□ -1.29
RTF1-202ENST00000462276 UNQ6190/PRO20217Q6UXQ8 127 aa6.97□□□□□ -1.29
RTF1-202ENST00000462276 PCP2Q8IVA1 136 aa6.97□□□□□ -1.29
RTF1-202ENST00000462276 SCGB1D4Q6XE38 83 aa6.96□□□□□ -1.3
RTF1-202ENST00000462276 Q6ZVH6 145 aa6.96□□□□□ -1.3
RTF1-202ENST00000462276 C14orf144Q96I85 54 aa6.96□□□□□ -1.3
RTF1-202ENST00000462276 UQCR10Q9UDW1 63 aa6.96□□□□□ -1.3
RTF1-202ENST00000462276 DNAH2Q9P225 4427 aa6.95□□□□□ -1.3
RTF1-202ENST00000462276 A0A0J9YXY3 114 aa6.95□□□□□ -1.3
RTF1-202ENST00000462276 SLPIP03973 132 aa6.95□□□□□ -1.3
RTF1-202ENST00000462276 TLX1NBP0CAT3 122 aa6.95□□□□□ -1.3
RTF1-202ENST00000462276 Q6ZRU5 148 aa6.95□□□□□ -1.3
RTF1-202ENST00000462276 LINC00526Q96FQ7 95 aa6.95□□□□□ -1.3
RTF1-202ENST00000462276 ERG28Q9UKR5 140 aa6.95□□□□□ -1.3
RTF1-202ENST00000462276 TMEM238C9JI98 176 aa6.94□□□□□ -1.3
RTF1-202ENST00000462276 TSTD3H0UI37 97 aa6.94□□□□□ -1.3
RTF1-202ENST00000462276 MEIG1Q5JSS6 88 aa6.94□□□□□ -1.3
RTF1-202ENST00000462276 C10orf25Q5T742 122 aa6.94□□□□□ -1.3
RTF1-202ENST00000462276 C9orf163Q8N9P6 203 aa6.94□□□□□ -1.3
RTF1-202ENST00000462276 COPS9Q8WXC6 57 aa6.94□□□□□ -1.3
RTF1-202ENST00000462276 MIEN1Q9BRT3 115 aa6.94□□□□□ -1.3
RTF1-202ENST00000462276 KRTAP17-1Q9BYP8 105 aa6.94□□□□□ -1.3
RTF1-202ENST00000462276 HIGD1BQ9P298 99 aa6.94□□□□□ -1.3
RTF1-202ENST00000462276 C6orf48Q9UBA6 75 aa6.94□□□□□ -1.3
RTF1-202ENST00000462276 DNAH17Q9UFH2 4485 aa6.93□□□□□ -1.3
RTF1-202ENST00000462276 FRAS1Q86XX4 4008 aa6.93□□□□□ -1.3
RTF1-202ENST00000462276 IGLV2-33A0A075B6J2 118 aaPredicted RBP6.93□□□□□ -1.3
RTF1-202ENST00000462276 NDUFC2-KCTD14E9PQ53 114 aa6.93□□□□□ -1.3
RTF1-202ENST00000462276 TTTY13Q9BZ97 58 aa6.93□□□□□ -1.3
RTF1-202ENST00000462276 PPDPFQ9H3Y8 114 aa6.93□□□□□ -1.3
RTF1-202ENST00000462276 DNAH10Q8IVF4 4471 aa6.93□□□□□ -1.3
RTF1-202ENST00000462276 IGLV5-52A0A0A0MRZ9 124 aa6.92□□□□□ -1.3
RTF1-202ENST00000462276 LOC107984640A0A0U1RRK4 108 aa6.92□□□□□ -1.3
RTF1-202ENST00000462276 PTTG1IPP53801 180 aa6.92□□□□□ -1.3
RTF1-202ENST00000462276 LINC00158P58513 81 aa6.92□□□□□ -1.3
RTF1-202ENST00000462276 LINC00474Q9P2X8 69 aa6.92□□□□□ -1.3
RTF1-202ENST00000462276 IFITM1P13164 125 aa6.91□□□□□ -1.3
RTF1-202ENST00000462276 SPANXB1Q9NS25 103 aaPredicted RBP6.91□□□□□ -1.3
RTF1-202ENST00000462276 PCLOQ9Y6V0 5065 aa6.91□□□□□ -1.3
RTF1-202ENST00000462276 SMIM13P0DJ93 91 aa6.9□□□□□ -1.3
RTF1-202ENST00000462276 PFN2P35080 140 aa6.9□□□□□ -1.3
RTF1-202ENST00000462276 TAL2Q16559 108 aa6.9□□□□□ -1.3
RTF1-202ENST00000462276 LITAFQ99732 161 aa6.9□□□□□ -1.3
RTF1-202ENST00000462276 SPANXDQ9BXN6 97 aa6.9□□□□□ -1.3
RTF1-202ENST00000462276 SPANXCQ9NY87 97 aa6.9□□□□□ -1.3
RTF1-202ENST00000462276 LOC107984156A0A0G2JMH3 177 aa6.89□□□□□ -1.31
RTF1-202ENST00000462276 C16orf90A8MZG2 172 aa6.89□□□□□ -1.31
RTF1-202ENST00000462276 SRSF9Q13242 221 aaKnown RBP eCLIP6.89□□□□□ -1.31
RTF1-202ENST00000462276 C9orf116Q5BN46 136 aaPredicted RBP6.89□□□□□ -1.31
RTF1-202ENST00000462276 SDIM1Q6ZPB5 146 aa6.89□□□□□ -1.31
RTF1-202ENST00000462276 ARL17AQ8IVW1 177 aa6.89□□□□□ -1.31
RTF1-202ENST00000462276 MIR7-3HGQ8N6C7 128 aa6.89□□□□□ -1.31
RTF1-202ENST00000462276 PRO1933Q9H354 126 aa6.89□□□□□ -1.31
RTF1-202ENST00000462276 TP73-AS1Q9UF72 201 aa6.89□□□□□ -1.31
RTF1-202ENST00000462276 HNRNPA3P51991 378 aaKnown RBP6.88□□□□□ -1.31
RTF1-202ENST00000462276 ADAMTSL4-AS1Q5T5F5 129 aa6.88□□□□□ -1.31
RTF1-202ENST00000462276 RYR1P21817 5038 aa6.87□□□□□ -1.31
RTF1-202ENST00000462276 Q6ZRP5 223 aa6.87□□□□□ -1.31
RTF1-202ENST00000462276 C2orf91Q6ZV80 131 aa6.87□□□□□ -1.31
RTF1-202ENST00000462276 HIST1H4GQ99525 98 aa6.87□□□□□ -1.31
RTF1-202ENST00000462276 SND1-IT1Q9HBX3 110 aa6.87□□□□□ -1.31
RTF1-202ENST00000462276 A0A0U1RRA0 63 aa6.86□□□□□ -1.31
RTF1-202ENST00000462276 A0A1B0GVY2 172 aa6.86□□□□□ -1.31
RTF1-202ENST00000462276 KRTAP10-2P60368 255 aa6.86□□□□□ -1.31
RTF1-202ENST00000462276 RPL18AQ02543 176 aaKnown RBP6.86□□□□□ -1.31
RTF1-202ENST00000462276 HSD52Q0P140 79 aa6.86□□□□□ -1.31
RTF1-202ENST00000462276 LINC00308Q8TCZ7 52 aa6.86□□□□□ -1.31
RTF1-202ENST00000462276 RPL24P83731 157 aaKnown RBP6.85□□□□□ -1.31
RTF1-202ENST00000462276 GAGE2BQ13066 116 aa6.85□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 68 ms