RNA–Protein interactions for RNA: ENST00000461855.3

SPTAN1-204, Transcript of spectrin alpha, non-erythrocytic 1, humanhuman

TSL 2

Gene SPTAN1, Length 857 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTAN1-204ENST00000461855 Q6ZRP5 223 aa6.35□□□□□ -1.39
SPTAN1-204ENST00000461855 GEMIN7Q9H840 131 aaKnown RBP6.35□□□□□ -1.39
SPTAN1-204ENST00000461855 SMIM1B2RUZ4 78 aa6.34□□□□□ -1.39
SPTAN1-204ENST00000461855 GAGE2BQ13066 116 aa6.34□□□□□ -1.39
SPTAN1-204ENST00000461855 C2orf82Q6UX34 121 aa6.34□□□□□ -1.39
SPTAN1-204ENST00000461855 CHCHD1Q96BP2 118 aaKnown RBP6.34□□□□□ -1.39
SPTAN1-204ENST00000461855 DMBT1Q9UGM3 2413 aaPredicted RBP6.33□□□□□ -1.4
SPTAN1-204ENST00000461855 COLCA2A8K830 154 aa6.33□□□□□ -1.4
SPTAN1-204ENST00000461855 IGLC3P0DOY3 106 aa6.33□□□□□ -1.4
SPTAN1-204ENST00000461855 C9orf116Q5BN46 136 aaPredicted RBP6.33□□□□□ -1.4
SPTAN1-204ENST00000461855 C7orf33Q8WU49 177 aa6.33□□□□□ -1.4
SPTAN1-204ENST00000461855 NDUFC2-KCTD14E9PQ53 114 aa6.32□□□□□ -1.4
SPTAN1-204ENST00000461855 ATP5LO75964 103 aa6.32□□□□□ -1.4
SPTAN1-204ENST00000461855 TRGC2P03986 189 aa6.32□□□□□ -1.4
SPTAN1-204ENST00000461855 RPL18AQ02543 176 aaKnown RBP6.32□□□□□ -1.4
SPTAN1-204ENST00000461855 ODF1Q14990 250 aa6.32□□□□□ -1.4
SPTAN1-204ENST00000461855 PMCHL1Q16048 86 aa6.32□□□□□ -1.4
SPTAN1-204ENST00000461855 C6orf226Q5I0X4 101 aa6.32□□□□□ -1.4
SPTAN1-204ENST00000461855 KRTAP7-1Q8IUC3 87 aa6.32□□□□□ -1.4
SPTAN1-204ENST00000461855 LINC00469Q8N7U9 141 aa6.32□□□□□ -1.4
SPTAN1-204ENST00000461855 F8VRH5 84 aa6.31□□□□□ -1.4
SPTAN1-204ENST00000461855 OXTP01178 125 aa6.31□□□□□ -1.4
SPTAN1-204ENST00000461855 PRSS2P07478 247 aa6.31□□□□□ -1.4
SPTAN1-204ENST00000461855 CXCL5P42830 114 aa6.31□□□□□ -1.4
SPTAN1-204ENST00000461855 PRR3P79522 188 aaKnown RBP6.31□□□□□ -1.4
SPTAN1-204ENST00000461855 PACRGQ96M98 296 aaPredicted RBP6.31□□□□□ -1.4
SPTAN1-204ENST00000461855 IGLV5-39A0A0G2JS06 123 aa6.3□□□□□ -1.4
SPTAN1-204ENST00000461855 LINC00310P59036 64 aa6.3□□□□□ -1.4
SPTAN1-204ENST00000461855 CKS1BP61024 79 aa6.3□□□□□ -1.4
SPTAN1-204ENST00000461855 C9orf129Q5T035 196 aaKnown RBP6.3□□□□□ -1.4
SPTAN1-204ENST00000461855 TOMM7Q9P0U1 55 aa6.3□□□□□ -1.4
SPTAN1-204ENST00000461855 TRAV12-1A0A0B4J245 112 aa6.29□□□□□ -1.4
SPTAN1-204ENST00000461855 ZNF22P17026 224 aaPredicted RBP6.29□□□□□ -1.4
SPTAN1-204ENST00000461855 SRSF9Q13242 221 aaKnown RBP eCLIP6.29□□□□□ -1.4
SPTAN1-204ENST00000461855 COX7B2Q8TF08 81 aa6.29□□□□□ -1.4
SPTAN1-204ENST00000461855 FAM168BA1KXE4 195 aa6.28□□□□□ -1.4
SPTAN1-204ENST00000461855 H3BRM9 83 aa6.28□□□□□ -1.4
SPTAN1-204ENST00000461855 SPINK8P0C7L1 97 aa6.28□□□□□ -1.4
SPTAN1-204ENST00000461855 GAGE2EQ4V326 116 aa6.28□□□□□ -1.4
SPTAN1-204ENST00000461855 BAGE3Q86Y29 109 aa6.28□□□□□ -1.4
SPTAN1-204ENST00000461855 GAGE2DQ9UEU5 116 aa6.28□□□□□ -1.4
SPTAN1-204ENST00000461855 C11orf86A6NJI1 115 aa6.27□□□□□ -1.41
SPTAN1-204ENST00000461855 PHF5AQ7RTV0 110 aaKnown RBP6.27□□□□□ -1.41
SPTAN1-204ENST00000461855 IFI27L1Q96BM0 104 aa6.27□□□□□ -1.41
SPTAN1-204ENST00000461855 HSBP1O75506 76 aa6.26□□□□□ -1.41
SPTAN1-204ENST00000461855 NDUFA6P56556 154 aa6.26□□□□□ -1.41
SPTAN1-204ENST00000461855 SPINK6Q6UWN8 80 aa6.26□□□□□ -1.41
SPTAN1-204ENST00000461855 KRTAP11-1Q8IUC1 163 aa6.26□□□□□ -1.41
SPTAN1-204ENST00000461855 PSORS1C2Q9UIG4 136 aa6.26□□□□□ -1.41
SPTAN1-204ENST00000461855 CHTOPQ9Y3Y2 248 aaKnown RBP6.26□□□□□ -1.41
SPTAN1-204ENST00000461855 TNXBP22105 4242 aa6.26□□□□□ -1.41
SPTAN1-204ENST00000461855 J3QL48 77 aa6.25□□□□□ -1.41
SPTAN1-204ENST00000461855 NUPR1O60356 82 aa6.25□□□□□ -1.41
SPTAN1-204ENST00000461855 SERF1AO75920 110 aa6.25□□□□□ -1.41
SPTAN1-204ENST00000461855 MT1HL1P0DM35 61 aa6.25□□□□□ -1.41
SPTAN1-204ENST00000461855 FAM19A2Q8N3H0 131 aa6.25□□□□□ -1.41
SPTAN1-204ENST00000461855 FAM19A5Q7Z5A7 132 aaPredicted RBP6.24□□□□□ -1.41
SPTAN1-204ENST00000461855 PLA2G2DQ9UNK4 145 aa6.24□□□□□ -1.41
SPTAN1-204ENST00000461855 TMEM223A0PJW6 202 aa6.23□□□□□ -1.41
SPTAN1-204ENST00000461855 M0QXV9 152 aa6.23□□□□□ -1.41
SPTAN1-204ENST00000461855 SCO1O75880 301 aa6.23□□□□□ -1.41
SPTAN1-204ENST00000461855 SERTAD4-AS1Q5TG53 156 aa6.23□□□□□ -1.41
SPTAN1-204ENST00000461855 ZNF625Q96I27 306 aaPredicted RBP6.23□□□□□ -1.41
SPTAN1-204ENST00000461855 XAGE1AQ9HD64 81 aa6.23□□□□□ -1.41
SPTAN1-204ENST00000461855 TP73-AS1Q9UF72 201 aa6.23□□□□□ -1.41
SPTAN1-204ENST00000461855 IGLV5-37A0A075B6J1 123 aa6.22□□□□□ -1.41
SPTAN1-204ENST00000461855 LEPROTL1O95214 131 aa6.22□□□□□ -1.41
SPTAN1-204ENST00000461855 TMEM170BQ5T4T1 132 aa6.22□□□□□ -1.41
SPTAN1-204ENST00000461855 SFTA2Q6UW10 78 aa6.22□□□□□ -1.41
SPTAN1-204ENST00000461855 LINC01600Q96MT4 127 aa6.22□□□□□ -1.41
SPTAN1-204ENST00000461855 C22orf24Q9Y442 160 aa6.22□□□□□ -1.41
SPTAN1-204ENST00000461855 HMCN2Q8NDA2 5059 aa6.21□□□□□ -1.41
SPTAN1-204ENST00000461855 HIST1H2BKO60814 126 aa6.21□□□□□ -1.42
SPTAN1-204ENST00000461855 IGLV7-43P04211 117 aa6.21□□□□□ -1.42
SPTAN1-204ENST00000461855 HIST1H2BJP06899 126 aa6.21□□□□□ -1.42
SPTAN1-204ENST00000461855 HIST1H2BOP23527 126 aa6.21□□□□□ -1.42
SPTAN1-204ENST00000461855 HIST1H2BBP33778 126 aa6.21□□□□□ -1.42
SPTAN1-204ENST00000461855 SMCPP49901 116 aaPredicted RBP6.21□□□□□ -1.42
SPTAN1-204ENST00000461855 HIST1H2BDP58876 126 aa6.21□□□□□ -1.42
SPTAN1-204ENST00000461855 HIST1H2BCP62807 126 aa6.21□□□□□ -1.42
SPTAN1-204ENST00000461855 COX17Q14061 63 aa6.21□□□□□ -1.42
SPTAN1-204ENST00000461855 HIST2H2BEQ16778 126 aa6.21□□□□□ -1.42
SPTAN1-204ENST00000461855 HIST2H2BFQ5QNW6 126 aaPredicted RBP6.21□□□□□ -1.42
SPTAN1-204ENST00000461855 HIST1H2BHQ93079 126 aa6.21□□□□□ -1.42
SPTAN1-204ENST00000461855 HIST1H2BNQ99877 126 aa6.21□□□□□ -1.42
SPTAN1-204ENST00000461855 HIST1H2BMQ99879 126 aa6.21□□□□□ -1.42
SPTAN1-204ENST00000461855 C1orf137Q5JT78 98 aa6.2□□□□□ -1.42
SPTAN1-204ENST00000461855 HSPB8Q9UJY1 196 aa6.2□□□□□ -1.42
SPTAN1-204ENST00000461855 KRTAP10-8P60410 259 aa6.19□□□□□ -1.42
SPTAN1-204ENST00000461855 LBHQ53QV2 105 aaPredicted RBP6.19□□□□□ -1.42
SPTAN1-204ENST00000461855 ERG28Q9UKR5 140 aa6.19□□□□□ -1.42
SPTAN1-204ENST00000461855 COA6Q5JTJ3 125 aaKnown RBP6.18□□□□□ -1.42
SPTAN1-204ENST00000461855 MRPL55Q7Z7F7 128 aaKnown RBP6.18□□□□□ -1.42
SPTAN1-204ENST00000461855 FABP4P15090 132 aa6.17□□□□□ -1.42
SPTAN1-204ENST00000461855 PLNP26678 52 aa6.17□□□□□ -1.42
SPTAN1-204ENST00000461855 PFN2P35080 140 aa6.17□□□□□ -1.42
SPTAN1-204ENST00000461855 UBE2BP63146 152 aa6.17□□□□□ -1.42
SPTAN1-204ENST00000461855 REG3GQ6UW15 175 aa6.17□□□□□ -1.42
SPTAN1-204ENST00000461855 LINC00167Q96N53 147 aa6.17□□□□□ -1.42
SPTAN1-204ENST00000461855 SND1-IT1Q9HBX3 110 aa6.17□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 80.1 ms