RNA–Protein interactions for RNA: ENST00000460431.1

SMARCD3-204, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 3, humanhuman

TSL 3

Gene SMARCD3, Length 673 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD3-204ENST00000460431 HNRNPA3P51991 378 aaKnown RBP10.3□□□□□ -0.76
SMARCD3-204ENST00000460431 PMCHL1Q16048 86 aa10.3□□□□□ -0.76
SMARCD3-204ENST00000460431 PDZD11Q5EBL8 140 aa10.3□□□□□ -0.76
SMARCD3-204ENST00000460431 C6orf226Q5I0X4 101 aa10.3□□□□□ -0.76
SMARCD3-204ENST00000460431 LINC00469Q8N7U9 141 aa10.3□□□□□ -0.76
SMARCD3-204ENST00000460431 PACRGQ96M98 296 aaPredicted RBP10.3□□□□□ -0.76
SMARCD3-204ENST00000460431 TOMM7Q9P0U1 55 aa10.3□□□□□ -0.76
SMARCD3-204ENST00000460431 Q6ZRP5 223 aa10.29□□□□□ -0.76
SMARCD3-204ENST00000460431 SMIM1B2RUZ4 78 aa10.28□□□□□ -0.76
SMARCD3-204ENST00000460431 CKS1BP61024 79 aa10.28□□□□□ -0.76
SMARCD3-204ENST00000460431 C9orf116Q5BN46 136 aaPredicted RBP10.28□□□□□ -0.76
SMARCD3-204ENST00000460431 CHCHD1Q96BP2 118 aaKnown RBP10.28□□□□□ -0.76
SMARCD3-204ENST00000460431 ATP5LO75964 103 aa10.27□□□□□ -0.77
SMARCD3-204ENST00000460431 LRP1Q07954 4544 aaKnown RBP10.27□□□□□ -0.77
SMARCD3-204ENST00000460431 NDUFC2-KCTD14E9PQ53 114 aa10.26□□□□□ -0.77
SMARCD3-204ENST00000460431 TRGC2P03986 189 aa10.26□□□□□ -0.77
SMARCD3-204ENST00000460431 IGLC3P0DOY3 106 aa10.26□□□□□ -0.77
SMARCD3-204ENST00000460431 NDUFA6P56556 154 aa10.26□□□□□ -0.77
SMARCD3-204ENST00000460431 PKHD1L1Q86WI1 4243 aa10.25□□□□□ -0.77
SMARCD3-204ENST00000460431 GAGE2EQ4V326 116 aa10.25□□□□□ -0.77
SMARCD3-204ENST00000460431 GAGE2DQ9UEU5 116 aa10.25□□□□□ -0.77
SMARCD3-204ENST00000460431 COLCA2A8K830 154 aa10.24□□□□□ -0.77
SMARCD3-204ENST00000460431 OXTP01178 125 aa10.24□□□□□ -0.77
SMARCD3-204ENST00000460431 PRR3P79522 188 aaKnown RBP10.24□□□□□ -0.77
SMARCD3-204ENST00000460431 F8VRH5 84 aa10.23□□□□□ -0.77
SMARCD3-204ENST00000460431 H3BRM9 83 aa10.23□□□□□ -0.77
SMARCD3-204ENST00000460431 SPINK8P0C7L1 97 aa10.23□□□□□ -0.77
SMARCD3-204ENST00000460431 CXCL5P42830 114 aa10.23□□□□□ -0.77
SMARCD3-204ENST00000460431 COX7B2Q8TF08 81 aa10.23□□□□□ -0.77
SMARCD3-204ENST00000460431 FAM168BA1KXE4 195 aa10.22□□□□□ -0.77
SMARCD3-204ENST00000460431 BAGE3Q86Y29 109 aa10.22□□□□□ -0.77
SMARCD3-204ENST00000460431 ZNF22P17026 224 aaPredicted RBP10.2□□□□□ -0.78
SMARCD3-204ENST00000460431 C9orf129Q5T035 196 aaKnown RBP10.2□□□□□ -0.78
SMARCD3-204ENST00000460431 PHF5AQ7RTV0 110 aaKnown RBP10.2□□□□□ -0.78
SMARCD3-204ENST00000460431 KRTAP7-1Q8IUC3 87 aa10.2□□□□□ -0.78
SMARCD3-204ENST00000460431 IFI27L1Q96BM0 104 aa10.2□□□□□ -0.78
SMARCD3-204ENST00000460431 FAT3Q8TDW7 4589 aa10.2□□□□□ -0.78
SMARCD3-204ENST00000460431 IGLV5-39A0A0G2JS06 123 aa10.19□□□□□ -0.78
SMARCD3-204ENST00000460431 HSBP1O75506 76 aa10.19□□□□□ -0.78
SMARCD3-204ENST00000460431 FAM19A2Q8N3H0 131 aa10.19□□□□□ -0.78
SMARCD3-204ENST00000460431 TRAV12-1A0A0B4J245 112 aa10.18□□□□□ -0.78
SMARCD3-204ENST00000460431 C11orf86A6NJI1 115 aa10.18□□□□□ -0.78
SMARCD3-204ENST00000460431 SERTAD4-AS1Q5TG53 156 aa10.18□□□□□ -0.78
SMARCD3-204ENST00000460431 FAM19A5Q7Z5A7 132 aaPredicted RBP10.18□□□□□ -0.78
SMARCD3-204ENST00000460431 CHTOPQ9Y3Y2 248 aaKnown RBP10.18□□□□□ -0.78
SMARCD3-204ENST00000460431 LINC00310P59036 64 aa10.17□□□□□ -0.78
SMARCD3-204ENST00000460431 SERF1AO75920 110 aa10.16□□□□□ -0.78
SMARCD3-204ENST00000460431 SRSF9Q13242 221 aaKnown RBP eCLIP10.16□□□□□ -0.78
SMARCD3-204ENST00000460431 PSORS1C2Q9UIG4 136 aa10.16□□□□□ -0.78
SMARCD3-204ENST00000460431 SCO1O75880 301 aa10.15□□□□□ -0.78
SMARCD3-204ENST00000460431 TMEM170BQ5T4T1 132 aa10.15□□□□□ -0.78
SMARCD3-204ENST00000460431 XAGE1AQ9HD64 81 aa10.15□□□□□ -0.78
SMARCD3-204ENST00000460431 NUPR1O60356 82 aa10.14□□□□□ -0.79
SMARCD3-204ENST00000460431 SPINK6Q6UWN8 80 aa10.14□□□□□ -0.79
SMARCD3-204ENST00000460431 M0QXV9 152 aa10.13□□□□□ -0.79
SMARCD3-204ENST00000460431 KRTAP11-1Q8IUC1 163 aa10.13□□□□□ -0.79
SMARCD3-204ENST00000460431 LEPROTL1O95214 131 aa10.12□□□□□ -0.79
SMARCD3-204ENST00000460431 ODF1Q14990 250 aa10.12□□□□□ -0.79
SMARCD3-204ENST00000460431 C1orf137Q5JT78 98 aa10.11□□□□□ -0.79
SMARCD3-204ENST00000460431 HMCN2Q8NDA2 5059 aa10.1□□□□□ -0.79
SMARCD3-204ENST00000460431 TMEM223A0PJW6 202 aa10.1□□□□□ -0.79
SMARCD3-204ENST00000460431 MT1HL1P0DM35 61 aa10.1□□□□□ -0.79
SMARCD3-204ENST00000460431 C22orf24Q9Y442 160 aa10.1□□□□□ -0.79
SMARCD3-204ENST00000460431 UBE2BP63146 152 aa10.08□□□□□ -0.8
SMARCD3-204ENST00000460431 SFTA2Q6UW10 78 aa10.08□□□□□ -0.8
SMARCD3-204ENST00000460431 ZNF625Q96I27 306 aaPredicted RBP10.08□□□□□ -0.8
SMARCD3-204ENST00000460431 TP73-AS1Q9UF72 201 aa10.08□□□□□ -0.8
SMARCD3-204ENST00000460431 HSPB8Q9UJY1 196 aa10.08□□□□□ -0.8
SMARCD3-204ENST00000460431 PLA2G2DQ9UNK4 145 aa10.08□□□□□ -0.8
SMARCD3-204ENST00000460431 HIST1H2BKO60814 126 aa10.07□□□□□ -0.8
SMARCD3-204ENST00000460431 IGLV7-43P04211 117 aa10.07□□□□□ -0.8
SMARCD3-204ENST00000460431 HIST1H2BJP06899 126 aa10.07□□□□□ -0.8
SMARCD3-204ENST00000460431 FABP4P15090 132 aa10.07□□□□□ -0.8
SMARCD3-204ENST00000460431 HIST1H2BOP23527 126 aa10.07□□□□□ -0.8
SMARCD3-204ENST00000460431 HIST1H2BBP33778 126 aa10.07□□□□□ -0.8
SMARCD3-204ENST00000460431 PFN2P35080 140 aa10.07□□□□□ -0.8
SMARCD3-204ENST00000460431 HIST1H2BDP58876 126 aa10.07□□□□□ -0.8
SMARCD3-204ENST00000460431 HIST1H2BCP62807 126 aa10.07□□□□□ -0.8
SMARCD3-204ENST00000460431 COX17Q14061 63 aa10.07□□□□□ -0.8
SMARCD3-204ENST00000460431 HIST2H2BEQ16778 126 aa10.07□□□□□ -0.8
SMARCD3-204ENST00000460431 HIST2H2BFQ5QNW6 126 aaPredicted RBP10.07□□□□□ -0.8
SMARCD3-204ENST00000460431 HIST1H2BHQ93079 126 aa10.07□□□□□ -0.8
SMARCD3-204ENST00000460431 HIST1H2BNQ99877 126 aa10.07□□□□□ -0.8
SMARCD3-204ENST00000460431 HIST1H2BMQ99879 126 aa10.07□□□□□ -0.8
SMARCD3-204ENST00000460431 ERG28Q9UKR5 140 aa10.07□□□□□ -0.8
SMARCD3-204ENST00000460431 H0Y8G0 127 aa10.06□□□□□ -0.8
SMARCD3-204ENST00000460431 LBHQ53QV2 105 aaPredicted RBP10.06□□□□□ -0.8
SMARCD3-204ENST00000460431 LINC01600Q96MT4 127 aa10.06□□□□□ -0.8
SMARCD3-204ENST00000460431 REG3GQ6UW15 175 aa10.05□□□□□ -0.8
SMARCD3-204ENST00000460431 IGLV5-37A0A075B6J1 123 aa10.04□□□□□ -0.8
SMARCD3-204ENST00000460431 MRPL55Q7Z7F7 128 aaKnown RBP10.04□□□□□ -0.8
SMARCD3-204ENST00000460431 SND1-IT1Q9HBX3 110 aa10.03□□□□□ -0.8
SMARCD3-204ENST00000460431 PLNP26678 52 aa10.02□□□□□ -0.81
SMARCD3-204ENST00000460431 LINC00167Q96N53 147 aa10.01□□□□□ -0.81
SMARCD3-204ENST00000460431 DPM2O94777 84 aa10□□□□□ -0.81
SMARCD3-204ENST00000460431 DIRC1Q969H9 104 aa10□□□□□ -0.81
SMARCD3-204ENST00000460431 MAP1LC3CQ9BXW4 147 aa10□□□□□ -0.81
SMARCD3-204ENST00000460431 KRTAP10-8P60410 259 aa9.99□□□□□ -0.81
SMARCD3-204ENST00000460431 NKAPP1Q8N9T2 125 aa9.99□□□□□ -0.81
SMARCD3-204ENST00000460431 PMCHL2Q9BQD1 86 aa9.99□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms