RNA–Protein interactions for RNA: ENST00000460035.1

CCDC12-204, Transcript of coiled-coil domain containing 12, humanhuman

TSL 2

Gene CCDC12, Length 572 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC12-204ENST00000460035 COX7B2Q8TF08 81 aa6.96□□□□□ -1.3
CCDC12-204ENST00000460035 PKIGQ9Y2B9 76 aa6.96□□□□□ -1.3
CCDC12-204ENST00000460035 LOC107984640A0A0U1RRK4 108 aa6.95□□□□□ -1.3
CCDC12-204ENST00000460035 CHTF8P0CG12 524 aa6.95□□□□□ -1.3
CCDC12-204ENST00000460035 GAGE2BQ13066 116 aa6.95□□□□□ -1.3
CCDC12-204ENST00000460035 RNF151Q2KHN1 245 aa6.95□□□□□ -1.3
CCDC12-204ENST00000460035 C6orf48Q9UBA6 75 aa6.95□□□□□ -1.3
CCDC12-204ENST00000460035 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP6.95□□□□□ -1.3
CCDC12-204ENST00000460035 PANO1I0J062 215 aa6.94□□□□□ -1.3
CCDC12-204ENST00000460035 SMR3BP02814 79 aaPredicted RBP6.94□□□□□ -1.3
CCDC12-204ENST00000460035 CIRBPQ14011 172 aaKnown RBP6.94□□□□□ -1.3
CCDC12-204ENST00000460035 ODF1Q14990 250 aa6.94□□□□□ -1.3
CCDC12-204ENST00000460035 MAJINQ3KP22 176 aa6.94□□□□□ -1.3
CCDC12-204ENST00000460035 SCXQ7RTU7 201 aa6.94□□□□□ -1.3
CCDC12-204ENST00000460035 CIRBP-AS1Q8TBR5 109 aa6.94□□□□□ -1.3
CCDC12-204ENST00000460035 PMCHL2Q9BQD1 86 aa6.94□□□□□ -1.3
CCDC12-204ENST00000460035 A0A096LNI7 61 aa6.93□□□□□ -1.3
CCDC12-204ENST00000460035 TRBV30A0A0K0K1B3 111 aa6.93□□□□□ -1.3
CCDC12-204ENST00000460035 S100A6P06703 90 aa6.93□□□□□ -1.3
CCDC12-204ENST00000460035 RPL18AQ02543 176 aaKnown RBP6.93□□□□□ -1.3
CCDC12-204ENST00000460035 HSPG2P98160 4391 aa6.92□□□□□ -1.3
CCDC12-204ENST00000460035 IGLV5-39A0A0G2JS06 123 aa6.92□□□□□ -1.3
CCDC12-204ENST00000460035 TMEM223A0PJW6 202 aa6.92□□□□□ -1.3
CCDC12-204ENST00000460035 SYS1-DBNDD2H3BUS1 97 aa6.92□□□□□ -1.3
CCDC12-204ENST00000460035 DPM2O94777 84 aa6.92□□□□□ -1.3
CCDC12-204ENST00000460035 CXCL5P42830 114 aa6.92□□□□□ -1.3
CCDC12-204ENST00000460035 C9orf116Q5BN46 136 aaPredicted RBP6.92□□□□□ -1.3
CCDC12-204ENST00000460035 LINC00474Q9P2X8 69 aa6.92□□□□□ -1.3
CCDC12-204ENST00000460035 A0A087WYN8 130 aa6.91□□□□□ -1.3
CCDC12-204ENST00000460035 IGKCP01834 107 aa6.91□□□□□ -1.3
CCDC12-204ENST00000460035 PLNP26678 52 aa6.91□□□□□ -1.3
CCDC12-204ENST00000460035 PTTG1IPP53801 180 aa6.91□□□□□ -1.3
CCDC12-204ENST00000460035 KRTDAPP60985 99 aa6.91□□□□□ -1.3
CCDC12-204ENST00000460035 GAGE2EQ4V326 116 aa6.91□□□□□ -1.3
CCDC12-204ENST00000460035 SPACA4Q8TDM5 124 aa6.91□□□□□ -1.3
CCDC12-204ENST00000460035 GAGE2DQ9UEU5 116 aa6.91□□□□□ -1.3
CCDC12-204ENST00000460035 HERC2O95714 4834 aa6.9□□□□□ -1.3
CCDC12-204ENST00000460035 TLX1NBP0CAT3 122 aa6.9□□□□□ -1.3
CCDC12-204ENST00000460035 S100A2P29034 98 aa6.9□□□□□ -1.3
CCDC12-204ENST00000460035 PET117Q6UWS5 81 aa6.9□□□□□ -1.3
CCDC12-204ENST00000460035 STPG4Q8N801 248 aa6.9□□□□□ -1.3
CCDC12-204ENST00000460035 NDUFC2-KCTD14E9PQ53 114 aa6.89□□□□□ -1.31
CCDC12-204ENST00000460035 FAM229AH3BQW9 127 aa6.89□□□□□ -1.31
CCDC12-204ENST00000460035 C3orf79P0CE67 100 aa6.89□□□□□ -1.31
CCDC12-204ENST00000460035 Q6ZRP5 223 aa6.89□□□□□ -1.31
CCDC12-204ENST00000460035 Q8N1X5 172 aa6.89□□□□□ -1.31
CCDC12-204ENST00000460035 HERVK_113P61574 105 aa6.88□□□□□ -1.31
CCDC12-204ENST00000460035 SNRPEP62304 92 aaKnown RBP6.88□□□□□ -1.31
CCDC12-204ENST00000460035 HIST3H2BBQ8N257 126 aa6.88□□□□□ -1.31
CCDC12-204ENST00000460035 ZNF625Q96I27 306 aaPredicted RBP6.88□□□□□ -1.31
CCDC12-204ENST00000460035 EPM2AB3EWF7 344 aa6.87□□□□□ -1.31
CCDC12-204ENST00000460035 LINC01545Q5VT33 79 aa6.87□□□□□ -1.31
CCDC12-204ENST00000460035 LINC00528Q8N1L1 170 aa6.87□□□□□ -1.31
CCDC12-204ENST00000460035 KRTAP17-1Q9BYP8 105 aa6.87□□□□□ -1.31
CCDC12-204ENST00000460035 PLAC8Q9NZF1 115 aa6.87□□□□□ -1.31
CCDC12-204ENST00000460035 C20orf202A1L168 122 aa6.86□□□□□ -1.31
CCDC12-204ENST00000460035 LEPROTO15243 131 aa6.86□□□□□ -1.31
CCDC12-204ENST00000460035 PFN2P35080 140 aa6.86□□□□□ -1.31
CCDC12-204ENST00000460035 SFTA2Q6UW10 78 aa6.86□□□□□ -1.31
CCDC12-204ENST00000460035 HIST1H2BLQ99880 126 aa6.86□□□□□ -1.31
CCDC12-204ENST00000460035 A0A1W2PNN7 141 aa6.85□□□□□ -1.31
CCDC12-204ENST00000460035 Q5VSD8 79 aa6.85□□□□□ -1.31
CCDC12-204ENST00000460035 PLEKHB2Q96CS7 222 aa6.85□□□□□ -1.31
CCDC12-204ENST00000460035 XAGE1AQ9HD64 81 aa6.85□□□□□ -1.31
CCDC12-204ENST00000460035 FAM168BA1KXE4 195 aa6.84□□□□□ -1.31
CCDC12-204ENST00000460035 LGALS3P17931 250 aaKnown RBP6.84□□□□□ -1.31
CCDC12-204ENST00000460035 C7orf33Q8WU49 177 aa6.84□□□□□ -1.31
CCDC12-204ENST00000460035 KRTAP4-5Q9BYR2 181 aa6.84□□□□□ -1.31
CCDC12-204ENST00000460035 NDUFA12Q9UI09 145 aa6.84□□□□□ -1.31
CCDC12-204ENST00000460035 ERG28Q9UKR5 140 aa6.84□□□□□ -1.31
CCDC12-204ENST00000460035 A0A0U1RRA0 63 aa6.83□□□□□ -1.32
CCDC12-204ENST00000460035 MYMXA0A1B0GTQ4 84 aa6.83□□□□□ -1.32
CCDC12-204ENST00000460035 C5orf52A6NGY3 159 aa6.83□□□□□ -1.32
CCDC12-204ENST00000460035 J3QQQ9 107 aa6.83□□□□□ -1.32
CCDC12-204ENST00000460035 PLA2G1BP04054 148 aaKnown RBP6.83□□□□□ -1.32
CCDC12-204ENST00000460035 LINC00158P58513 81 aa6.83□□□□□ -1.32
CCDC12-204ENST00000460035 C9orf129Q5T035 196 aaKnown RBP6.83□□□□□ -1.32
CCDC12-204ENST00000460035 FAM19A5Q7Z5A7 132 aaPredicted RBP6.83□□□□□ -1.32
CCDC12-204ENST00000460035 TSPEAR-AS2P59090 65 aa6.82□□□□□ -1.32
CCDC12-204ENST00000460035 RPL37AP61513 92 aaKnown RBP6.82□□□□□ -1.32
CCDC12-204ENST00000460035 MEIG1Q5JSS6 88 aa6.82□□□□□ -1.32
CCDC12-204ENST00000460035 FAT1Q14517 4588 aa6.81□□□□□ -1.32
CCDC12-204ENST00000460035 E9PLD3 99 aa6.81□□□□□ -1.32
CCDC12-204ENST00000460035 HERV-K104P63124 156 aa6.81□□□□□ -1.32
CCDC12-204ENST00000460035 COX17Q14061 63 aa6.81□□□□□ -1.32
CCDC12-204ENST00000460035 PHF5AQ7RTV0 110 aaKnown RBP6.81□□□□□ -1.32
CCDC12-204ENST00000460035 ATOH7Q8N100 152 aa6.81□□□□□ -1.32
CCDC12-204ENST00000460035 SMIM13P0DJ93 91 aa6.8□□□□□ -1.32
CCDC12-204ENST00000460035 NMUP48645 174 aa6.8□□□□□ -1.32
CCDC12-204ENST00000460035 AKR1D1P51857 326 aa6.8□□□□□ -1.32
CCDC12-204ENST00000460035 VPS13BQ7Z7G8 4022 aa6.79□□□□□ -1.32
CCDC12-204ENST00000460035 FLG2Q5D862 2391 aaPredicted RBP6.79□□□□□ -1.32
CCDC12-204ENST00000460035 LINC00587B1AMM8 73 aa6.79□□□□□ -1.32
CCDC12-204ENST00000460035 M0QXV9 152 aa6.79□□□□□ -1.32
CCDC12-204ENST00000460035 SCGB1D1O95968 90 aa6.79□□□□□ -1.32
CCDC12-204ENST00000460035 SERTAD4-AS1Q5TG53 156 aa6.79□□□□□ -1.32
CCDC12-204ENST00000460035 SND1-IT1Q9HBX3 110 aa6.79□□□□□ -1.32
CCDC12-204ENST00000460035 TMA7Q9Y2S6 64 aaKnown RBP6.79□□□□□ -1.32
CCDC12-204ENST00000460035 INAFM2P0DMQ5 153 aa6.78□□□□□ -1.32
CCDC12-204ENST00000460035 KRTAP7-1Q8IUC3 87 aa6.78□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 77 ms