RNA–Protein interactions for RNA: ENST00000457642.1

HMGN1P18-201, Transcript of high mobility group nucleosome binding domain 1 pseudogene 18, humanhuman

BASIC

Gene HMGN1P18, Length 277 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1P18-201ENST00000457642 SLPIP03973 132 aa2.31□□□□□ -2.04
HMGN1P18-201ENST00000457642 MIFP14174 115 aa2.31□□□□□ -2.04
HMGN1P18-201ENST00000457642 RBM3P98179 157 aaKnown RBP2.31□□□□□ -2.04
HMGN1P18-201ENST00000457642 REG3AQ06141 175 aa2.31□□□□□ -2.04
HMGN1P18-201ENST00000457642 SPAG11BQ08648 103 aa2.31□□□□□ -2.04
HMGN1P18-201ENST00000457642 CLPSL2Q6UWE3 100 aa2.31□□□□□ -2.04
HMGN1P18-201ENST00000457642 LINC00269Q8N2A0 174 aa2.31□□□□□ -2.04
HMGN1P18-201ENST00000457642 BBC3Q96PG8 261 aaPredicted RBP2.31□□□□□ -2.04
HMGN1P18-201ENST00000457642 DSCR8Q96T75 97 aa2.31□□□□□ -2.04
HMGN1P18-201ENST00000457642 LINC00846Q9NV44 126 aa2.31□□□□□ -2.04
HMGN1P18-201ENST00000457642 LAMTOR3Q9UHA4 124 aa2.31□□□□□ -2.04
HMGN1P18-201ENST00000457642 C22orf24Q9Y442 160 aa2.31□□□□□ -2.04
HMGN1P18-201ENST00000457642 MYO9AB2RTY4 2548 aa2.31□□□□□ -2.04
HMGN1P18-201ENST00000457642 USP9YO00507 2555 aaPredicted RBP2.31□□□□□ -2.04
HMGN1P18-201ENST00000457642 LAMA5O15230 3695 aa2.3□□□□□ -2.04
HMGN1P18-201ENST00000457642 WNK1Q9H4A3 2382 aa2.3□□□□□ -2.04
HMGN1P18-201ENST00000457642 MYO18BQ8IUG5 2567 aa2.3□□□□□ -2.04
HMGN1P18-201ENST00000457642 USP9XQ93008 2570 aaPredicted RBP2.3□□□□□ -2.04
HMGN1P18-201ENST00000457642 LOC110117498A0A087WWA1 95 aa2.3□□□□□ -2.04
HMGN1P18-201ENST00000457642 A0A096LPF7 62 aa2.3□□□□□ -2.04
HMGN1P18-201ENST00000457642 NDUFC2-KCTD14E9PQ53 114 aa2.3□□□□□ -2.04
HMGN1P18-201ENST00000457642 SPART-AS1P0CW21 52 aa2.3□□□□□ -2.04
HMGN1P18-201ENST00000457642 C6orf99Q4VX62 202 aa2.3□□□□□ -2.04
HMGN1P18-201ENST00000457642 LELP1Q5T871 98 aa2.3□□□□□ -2.04
HMGN1P18-201ENST00000457642 LINC00575Q6W349 94 aa2.3□□□□□ -2.04
HMGN1P18-201ENST00000457642 C3orf56Q8N813 242 aa2.3□□□□□ -2.04
HMGN1P18-201ENST00000457642 LINC00482Q8N8I6 264 aa2.3□□□□□ -2.04
HMGN1P18-201ENST00000457642 DIRC1Q969H9 104 aa2.3□□□□□ -2.04
HMGN1P18-201ENST00000457642 X6R8D5 127 aa2.3□□□□□ -2.04
HMGN1P18-201ENST00000457642 CACNA1AO00555 2505 aa2.3□□□□□ -2.04
HMGN1P18-201ENST00000457642 PIEZO1Q92508 2521 aa2.29□□□□□ -2.04
HMGN1P18-201ENST00000457642 IGLV10-54A0A075B6I4 117 aa2.29□□□□□ -2.04
HMGN1P18-201ENST00000457642 TRAV23DV6A0A075B6W5 121 aa2.29□□□□□ -2.04
HMGN1P18-201ENST00000457642 GVQW2A0A096LPI5 108 aaPredicted RBP2.29□□□□□ -2.04
HMGN1P18-201ENST00000457642 HTN3P15516 51 aa2.29□□□□□ -2.04
HMGN1P18-201ENST00000457642 COX7BP24311 80 aa2.29□□□□□ -2.04
HMGN1P18-201ENST00000457642 RPS28P62857 69 aaKnown RBP2.29□□□□□ -2.04
HMGN1P18-201ENST00000457642 KIAA0087Q14695 138 aa2.29□□□□□ -2.04
HMGN1P18-201ENST00000457642 DEFB135Q30KP9 77 aa2.29□□□□□ -2.04
HMGN1P18-201ENST00000457642 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP2.29□□□□□ -2.04
HMGN1P18-201ENST00000457642 C6orf223Q8N319 242 aa2.29□□□□□ -2.04
HMGN1P18-201ENST00000457642 UPK3BQ9BT76 320 aa2.29□□□□□ -2.04
HMGN1P18-201ENST00000457642 PTPN13Q12923 2485 aa2.28□□□□□ -2.04
HMGN1P18-201ENST00000457642 A0A087WVE0 104 aa2.28□□□□□ -2.04
HMGN1P18-201ENST00000457642 A0A0J9YWU9 116 aa2.28□□□□□ -2.04
HMGN1P18-201ENST00000457642 TRBV7-6A0A0J9YX20 115 aa2.28□□□□□ -2.04
HMGN1P18-201ENST00000457642 F8WDY8 70 aa2.28□□□□□ -2.04
HMGN1P18-201ENST00000457642 IGHV4-30-4P0DP06 118 aa2.28□□□□□ -2.04
HMGN1P18-201ENST00000457642 PLA2G2AP14555 144 aa2.28□□□□□ -2.04
HMGN1P18-201ENST00000457642 CXCL6P80162 114 aa2.28□□□□□ -2.04
HMGN1P18-201ENST00000457642 ENHOQ6UWT2 76 aa2.28□□□□□ -2.04
HMGN1P18-201ENST00000457642 Q6ZQT0 140 aa2.28□□□□□ -2.04
HMGN1P18-201ENST00000457642 C2orf48Q96LS8 159 aa2.28□□□□□ -2.04
HMGN1P18-201ENST00000457642 CAMK2N2Q96S95 79 aa2.28□□□□□ -2.04
HMGN1P18-201ENST00000457642 LRRK2Q5S007 2527 aa2.28□□□□□ -2.04
HMGN1P18-201ENST00000457642 NOTCH3Q9UM47 2321 aa2.28□□□□□ -2.05
HMGN1P18-201ENST00000457642 DCHS1Q96JQ0 3298 aa2.27□□□□□ -2.05
HMGN1P18-201ENST00000457642 ZNF462Q96JM2 2506 aa2.27□□□□□ -2.05
HMGN1P18-201ENST00000457642 C2CD3Q4AC94 2353 aa2.27□□□□□ -2.05
HMGN1P18-201ENST00000457642 TRAV7A0A075B6U4 112 aa2.27□□□□□ -2.05
HMGN1P18-201ENST00000457642 LOC107984640A0A0U1RRK4 108 aa2.27□□□□□ -2.05
HMGN1P18-201ENST00000457642 FAM236DA0A1B0GTK5 79 aa2.27□□□□□ -2.05
HMGN1P18-201ENST00000457642 CYSRT1A8MQ03 144 aa2.27□□□□□ -2.05
HMGN1P18-201ENST00000457642 J3QKU1 62 aa2.27□□□□□ -2.05
HMGN1P18-201ENST00000457642 M0R378 163 aa2.27□□□□□ -2.05
HMGN1P18-201ENST00000457642 DEFB4AO15263 64 aa2.27□□□□□ -2.05
HMGN1P18-201ENST00000457642 ZNF73O43830 326 aaPredicted RBP2.27□□□□□ -2.05
HMGN1P18-201ENST00000457642 IGLV6-57P01721 117 aa2.27□□□□□ -2.05
HMGN1P18-201ENST00000457642 FAM236CP0DP71 79 aa2.27□□□□□ -2.05
HMGN1P18-201ENST00000457642 NANOS2P60321 138 aaKnown RBP2.27□□□□□ -2.05
HMGN1P18-201ENST00000457642 PRR3P79522 188 aaKnown RBP2.27□□□□□ -2.05
HMGN1P18-201ENST00000457642 HAMPP81172 84 aa2.27□□□□□ -2.05
HMGN1P18-201ENST00000457642 KRTAP1-1Q07627 177 aa2.27□□□□□ -2.05
HMGN1P18-201ENST00000457642 EGFEM1PQ0D2K5 195 aa2.27□□□□□ -2.05
HMGN1P18-201ENST00000457642 C9orf116Q5BN46 136 aaPredicted RBP2.27□□□□□ -2.05
HMGN1P18-201ENST00000457642 C9orf129Q5T035 196 aaKnown RBP2.27□□□□□ -2.05
HMGN1P18-201ENST00000457642 LYPD5Q6UWN5 251 aa2.27□□□□□ -2.05
HMGN1P18-201ENST00000457642 UNQ6190/PRO20217Q6UXQ8 127 aa2.27□□□□□ -2.05
HMGN1P18-201ENST00000457642 Q6ZQY7 126 aa2.27□□□□□ -2.05
HMGN1P18-201ENST00000457642 KLK12Q9UKR0 248 aa2.27□□□□□ -2.05
HMGN1P18-201ENST00000457642 ITPR1Q14643 2758 aa2.27□□□□□ -2.05
HMGN1P18-201ENST00000457642 POLQO75417 2590 aa2.27□□□□□ -2.05
HMGN1P18-201ENST00000457642 TLN2Q9Y4G6 2542 aa2.27□□□□□ -2.05
HMGN1P18-201ENST00000457642 IGSF10Q6WRI0 2623 aa2.26□□□□□ -2.05
HMGN1P18-201ENST00000457642 CSMD1Q96PZ7 3565 aa2.26□□□□□ -2.05
HMGN1P18-201ENST00000457642 H3BNG1 76 aa2.26□□□□□ -2.05
HMGN1P18-201ENST00000457642 NDUFC1O43677 76 aa2.26□□□□□ -2.05
HMGN1P18-201ENST00000457642 ATP5EP56381 51 aaPredicted RBP2.26□□□□□ -2.05
HMGN1P18-201ENST00000457642 LINC01547P58512 204 aaPredicted RBP2.26□□□□□ -2.05
HMGN1P18-201ENST00000457642 ELOF1P60002 83 aaKnown RBP2.26□□□□□ -2.05
HMGN1P18-201ENST00000457642 C5orf47Q569G3 176 aa2.26□□□□□ -2.05
HMGN1P18-201ENST00000457642 Q6ZVQ6 151 aa2.26□□□□□ -2.05
HMGN1P18-201ENST00000457642 NKAPP1Q8N9T2 125 aa2.26□□□□□ -2.05
HMGN1P18-201ENST00000457642 Q8NAQ8 132 aa2.26□□□□□ -2.05
HMGN1P18-201ENST00000457642 DPH3Q96FX2 82 aa2.26□□□□□ -2.05
HMGN1P18-201ENST00000457642 C1orf43Q9BWL3 253 aa2.26□□□□□ -2.05
HMGN1P18-201ENST00000457642 PRR34Q9NV39 138 aa2.26□□□□□ -2.05
HMGN1P18-201ENST00000457642 SONP18583 2426 aaKnown RBP2.26□□□□□ -2.05
HMGN1P18-201ENST00000457642 FLNCQ14315 2725 aa2.25□□□□□ -2.05
HMGN1P18-201ENST00000457642 CFAP46Q8IYW2 2715 aa2.25□□□□□ -2.05
Retrieved 100 of 20,778 RNA–protein pairs in 48.5 ms