RNA–Protein interactions for RNA: ENST00000457312.1

SF3B4-202, Transcript of splicing factor 3b subunit 4, humanhuman

TSL 5

Gene SF3B4, Length 826 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B4-202ENST00000457312 GPR98Q8WXG9 6306 aa8.27□□□□□ -1.09
SF3B4-202ENST00000457312 SMKR1H3BMG3 65 aa8.26□□□□□ -1.09
SF3B4-202ENST00000457312 SUMO2P61956 95 aaKnown RBP8.26□□□□□ -1.09
SF3B4-202ENST00000457312 A0A1B0GV50 99 aa8.25□□□□□ -1.09
SF3B4-202ENST00000457312 Q6ZN92 141 aa8.25□□□□□ -1.09
SF3B4-202ENST00000457312 NRACQ8N912 160 aa8.25□□□□□ -1.09
SF3B4-202ENST00000457312 ALKBH7Q9BT30 221 aaPredicted RBP8.25□□□□□ -1.09
SF3B4-202ENST00000457312 GNG4P50150 75 aa8.24□□□□□ -1.09
SF3B4-202ENST00000457312 TRBV20OR9-2A0A075B6H5 130 aa8.23□□□□□ -1.09
SF3B4-202ENST00000457312 BORCS7-ASMTA0A0B4J1R7 106 aa8.23□□□□□ -1.09
SF3B4-202ENST00000457312 RAB4AP20338 218 aa8.23□□□□□ -1.09
SF3B4-202ENST00000457312 LGALS3P17931 250 aaKnown RBP8.22□□□□□ -1.09
SF3B4-202ENST00000457312 SSNA1O43805 119 aa8.21□□□□□ -1.1
SF3B4-202ENST00000457312 VPREB1P12018 145 aa8.21□□□□□ -1.1
SF3B4-202ENST00000457312 CCL20P78556 96 aa8.21□□□□□ -1.1
SF3B4-202ENST00000457312 AMN1Q8IY45 258 aa8.21□□□□□ -1.1
SF3B4-202ENST00000457312 KCNRGQ8N5I3 272 aa8.21□□□□□ -1.1
SF3B4-202ENST00000457312 TMEM191AQ9H0A3 160 aa8.2□□□□□ -1.1
SF3B4-202ENST00000457312 BIN3Q9NQY0 253 aa8.2□□□□□ -1.1
SF3B4-202ENST00000457312 SFT2D1Q8WV19 159 aa8.19□□□□□ -1.1
SF3B4-202ENST00000457312 CXCL5P42830 114 aa8.18□□□□□ -1.1
SF3B4-202ENST00000457312 GAGE2AQ6NT46 116 aa8.18□□□□□ -1.1
SF3B4-202ENST00000457312 FAM231DQ6ZW35 169 aa8.18□□□□□ -1.1
SF3B4-202ENST00000457312 IGLV4-3A0A075B6K6 122 aa8.17□□□□□ -1.1
SF3B4-202ENST00000457312 PPP1R2P9O14990 202 aa8.17□□□□□ -1.1
SF3B4-202ENST00000457312 SMCR5Q8TEV8 140 aa8.17□□□□□ -1.1
SF3B4-202ENST00000457312 MBD3L1Q8WWY6 194 aa8.17□□□□□ -1.1
SF3B4-202ENST00000457312 TIMM17AQ99595 171 aa8.17□□□□□ -1.1
SF3B4-202ENST00000457312 PPP1R17O96001 155 aa8.16□□□□□ -1.1
SF3B4-202ENST00000457312 ENKURQ8TC29 256 aa8.16□□□□□ -1.1
SF3B4-202ENST00000457312 C20orf202A1L168 122 aa8.15□□□□□ -1.1
SF3B4-202ENST00000457312 NPSP0C0P6 89 aa8.15□□□□□ -1.1
SF3B4-202ENST00000457312 IFI27P40305 119 aaPredicted RBP8.14□□□□□ -1.11
SF3B4-202ENST00000457312 RAB5BP61020 215 aa8.14□□□□□ -1.11
SF3B4-202ENST00000457312 AKAP14Q86UN6 197 aa8.14□□□□□ -1.11
SF3B4-202ENST00000457312 K7EN84 100 aa8.13□□□□□ -1.11
SF3B4-202ENST00000457312 TCAPO15273 167 aa8.13□□□□□ -1.11
SF3B4-202ENST00000457312 KRTAP5-9P26371 169 aa8.13□□□□□ -1.11
SF3B4-202ENST00000457312 Q8NDZ9 215 aa8.13□□□□□ -1.11
SF3B4-202ENST00000457312 FAM213BQ8TBF2 198 aa8.13□□□□□ -1.11
SF3B4-202ENST00000457312 TMEM141Q96I45 108 aa8.13□□□□□ -1.11
SF3B4-202ENST00000457312 LIMD2Q9BT23 127 aa8.12□□□□□ -1.11
SF3B4-202ENST00000457312 ZC2HC1BQ5TFG8 222 aa8.11□□□□□ -1.11
SF3B4-202ENST00000457312 TEX43Q6ZNM6 134 aa8.11□□□□□ -1.11
SF3B4-202ENST00000457312 PYGO1Q9Y3Y4 419 aa8.11□□□□□ -1.11
SF3B4-202ENST00000457312 FAM19A3Q7Z5A8 133 aa8.1□□□□□ -1.11
SF3B4-202ENST00000457312 EIF5A2Q9GZV4 153 aaKnown RBP8.1□□□□□ -1.11
SF3B4-202ENST00000457312 CHTOPQ9Y3Y2 248 aaKnown RBP8.1□□□□□ -1.11
SF3B4-202ENST00000457312 Q5BKY6 102 aa8.09□□□□□ -1.11
SF3B4-202ENST00000457312 C9orf153Q5TBE3 101 aa8.09□□□□□ -1.11
SF3B4-202ENST00000457312 BORCS7Q96B45 105 aa8.09□□□□□ -1.11
SF3B4-202ENST00000457312 C20orf78Q9BR46 151 aa8.09□□□□□ -1.11
SF3B4-202ENST00000457312 C2orf88Q9BSF0 95 aa8.09□□□□□ -1.11
SF3B4-202ENST00000457312 SMIM2Q9BVW6 85 aa8.09□□□□□ -1.11
SF3B4-202ENST00000457312 MED9Q9NWA0 146 aa8.09□□□□□ -1.11
SF3B4-202ENST00000457312 A0A1B0GUT8 65 aa8.08□□□□□ -1.12
SF3B4-202ENST00000457312 MANBALQ9NQG1 85 aa8.08□□□□□ -1.12
SF3B4-202ENST00000457312 GNG13Q9P2W3 67 aa8.08□□□□□ -1.12
SF3B4-202ENST00000457312 CDKN2A-AS1Q9UH64 79 aa8.08□□□□□ -1.12
SF3B4-202ENST00000457312 GIPP09681 153 aaPredicted RBP8.06□□□□□ -1.12
SF3B4-202ENST00000457312 RPL24P83731 157 aaKnown RBP8.06□□□□□ -1.12
SF3B4-202ENST00000457312 A8MWL6 223 aa8.05□□□□□ -1.12
SF3B4-202ENST00000457312 KIAA1644Q3SXP7 199 aa8.05□□□□□ -1.12
SF3B4-202ENST00000457312 TRBV24-1A0A075B6N3 115 aa8.04□□□□□ -1.12
SF3B4-202ENST00000457312 SMIM1B2RUZ4 78 aa8.04□□□□□ -1.12
SF3B4-202ENST00000457312 GATCO43716 136 aaKnown RBP8.04□□□□□ -1.12
SF3B4-202ENST00000457312 ERC2-IT1O76042 136 aa8.04□□□□□ -1.12
SF3B4-202ENST00000457312 RAB14P61106 215 aa8.04□□□□□ -1.12
SF3B4-202ENST00000457312 COX7B2Q8TF08 81 aa8.04□□□□□ -1.12
SF3B4-202ENST00000457312 AMELXQ99217 191 aa8.04□□□□□ -1.12
SF3B4-202ENST00000457312 SND1-IT1Q9HBX3 110 aa8.04□□□□□ -1.12
SF3B4-202ENST00000457312 H2AFB1P0C5Y9 115 aa8.03□□□□□ -1.12
SF3B4-202ENST00000457312 MRPL51Q4U2R6 128 aaKnown RBP8.03□□□□□ -1.12
SF3B4-202ENST00000457312 OCC1Q8TAD7 63 aa8.03□□□□□ -1.12
SF3B4-202ENST00000457312 HIGD1CA8MV81 97 aa8.02□□□□□ -1.13
SF3B4-202ENST00000457312 SPRR1AP35321 89 aa8.02□□□□□ -1.13
SF3B4-202ENST00000457312 HRCT1Q6UXD1 115 aa8.02□□□□□ -1.13
SF3B4-202ENST00000457312 FXYD6-FXYD2A0A087WZ82 144 aa8.01□□□□□ -1.13
SF3B4-202ENST00000457312 PRYO14603 147 aa8.01□□□□□ -1.13
SF3B4-202ENST00000457312 PDE6DO43924 150 aa8.01□□□□□ -1.13
SF3B4-202ENST00000457312 HERVK_113P63121 156 aa8.01□□□□□ -1.13
SF3B4-202ENST00000457312 CT83Q5H943 113 aa8.01□□□□□ -1.13
SF3B4-202ENST00000457312 C20orf166-AS1Q96NR2 134 aa8.01□□□□□ -1.13
SF3B4-202ENST00000457312 PFN2P35080 140 aa8□□□□□ -1.13
SF3B4-202ENST00000457312 C2orf66Q6UXQ4 117 aa8□□□□□ -1.13
SF3B4-202ENST00000457312 UMAD1C9J7I0 102 aa7.99□□□□□ -1.13
SF3B4-202ENST00000457312 ETDCA0A1B0GVM5 59 aa7.97□□□□□ -1.13
SF3B4-202ENST00000457312 LINC00862A6NCI5 91 aa7.97□□□□□ -1.13
SF3B4-202ENST00000457312 PDZD11Q5EBL8 140 aa7.97□□□□□ -1.13
SF3B4-202ENST00000457312 FAM104BQ5XKR9 115 aa7.97□□□□□ -1.13
SF3B4-202ENST00000457312 KRTAP2-2Q9BYT5 123 aa7.97□□□□□ -1.13
SF3B4-202ENST00000457312 KRTAP2-1Q9BYU5 128 aa7.97□□□□□ -1.13
SF3B4-202ENST00000457312 VCX2Q9H322 139 aa7.97□□□□□ -1.13
SF3B4-202ENST00000457312 PRSS47A8MTI9 375 aa7.95□□□□□ -1.14
SF3B4-202ENST00000457312 NPYP01303 97 aa7.95□□□□□ -1.14
SF3B4-202ENST00000457312 CKS2P33552 79 aa7.95□□□□□ -1.14
SF3B4-202ENST00000457312 SEC11AP67812 179 aa7.95□□□□□ -1.14
SF3B4-202ENST00000457312 ATP5LO75964 103 aa7.94□□□□□ -1.14
SF3B4-202ENST00000457312 ATP11AUNQ6ZP68 121 aa7.94□□□□□ -1.14
SF3B4-202ENST00000457312 RIGQ13278 110 aa7.93□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 52.8 ms