RNA–Protein interactions for RNA: ENST00000457035.5

ATG4A-206, Transcript of autophagy related 4A cysteine peptidase, humanhuman

TSL 3

Gene ATG4A, Length 939 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4A-206ENST00000457035 VPS13BQ7Z7G8 4022 aa6.44□□□□□ -1.38
ATG4A-206ENST00000457035 NDUFA6P56556 154 aa6.44□□□□□ -1.38
ATG4A-206ENST00000457035 SPAG11BQ08648 103 aa6.44□□□□□ -1.38
ATG4A-206ENST00000457035 SYCNQ0VAF6 134 aa6.44□□□□□ -1.38
ATG4A-206ENST00000457035 ANKRD39Q53RE8 183 aa6.44□□□□□ -1.38
ATG4A-206ENST00000457035 LCE1DQ5T752 114 aa6.44□□□□□ -1.38
ATG4A-206ENST00000457035 IFI27L1Q96BM0 104 aa6.44□□□□□ -1.38
ATG4A-206ENST00000457035 F8WDY8 70 aa6.43□□□□□ -1.38
ATG4A-206ENST00000457035 PANO1I0J062 215 aa6.43□□□□□ -1.38
ATG4A-206ENST00000457035 IGLC3P0DOY3 106 aa6.43□□□□□ -1.38
ATG4A-206ENST00000457035 HAMPP81172 84 aa6.43□□□□□ -1.38
ATG4A-206ENST00000457035 Q6ZRU5 148 aa6.43□□□□□ -1.38
ATG4A-206ENST00000457035 CARD19Q96LW7 228 aa6.43□□□□□ -1.38
ATG4A-206ENST00000457035 CAMK2N2Q96S95 79 aa6.43□□□□□ -1.38
ATG4A-206ENST00000457035 TRAV12-1A0A0B4J245 112 aa6.42□□□□□ -1.38
ATG4A-206ENST00000457035 LEPROTL1O95214 131 aa6.42□□□□□ -1.38
ATG4A-206ENST00000457035 CIRBPQ14011 172 aaKnown RBP6.42□□□□□ -1.38
ATG4A-206ENST00000457035 C10orf25Q5T742 122 aa6.42□□□□□ -1.38
ATG4A-206ENST00000457035 UNQ6190/PRO20217Q6UXQ8 127 aa6.42□□□□□ -1.38
ATG4A-206ENST00000457035 LINC00469Q8N7U9 141 aa6.42□□□□□ -1.38
ATG4A-206ENST00000457035 CHAC1Q9BUX1 264 aa6.42□□□□□ -1.38
ATG4A-206ENST00000457035 SMIM1B2RUZ4 78 aa6.41□□□□□ -1.38
ATG4A-206ENST00000457035 RNF151Q2KHN1 245 aa6.41□□□□□ -1.38
ATG4A-206ENST00000457035 COA6Q5JTJ3 125 aaKnown RBP6.41□□□□□ -1.38
ATG4A-206ENST00000457035 MRPL35Q9NZE8 188 aaKnown RBP6.41□□□□□ -1.38
ATG4A-206ENST00000457035 TMA7Q9Y2S6 64 aaKnown RBP6.41□□□□□ -1.38
ATG4A-206ENST00000457035 C11orf86A6NJI1 115 aa6.4□□□□□ -1.38
ATG4A-206ENST00000457035 EPM2AB3EWF7 344 aa6.4□□□□□ -1.38
ATG4A-206ENST00000457035 NDUFA1O15239 70 aa6.4□□□□□ -1.38
ATG4A-206ENST00000457035 CHTF8P0CG12 524 aa6.4□□□□□ -1.38
ATG4A-206ENST00000457035 FABP4P15090 132 aa6.4□□□□□ -1.38
ATG4A-206ENST00000457035 ZNF22P17026 224 aaPredicted RBP6.4□□□□□ -1.38
ATG4A-206ENST00000457035 C2orf82Q6UX34 121 aa6.4□□□□□ -1.38
ATG4A-206ENST00000457035 SCXQ7RTU7 201 aa6.4□□□□□ -1.38
ATG4A-206ENST00000457035 Q8IZM0 81 aa6.4□□□□□ -1.38
ATG4A-206ENST00000457035 CIRBP-AS1Q8TBR5 109 aa6.4□□□□□ -1.38
ATG4A-206ENST00000457035 PACRGQ96M98 296 aaPredicted RBP6.4□□□□□ -1.38
ATG4A-206ENST00000457035 CHTOPQ9Y3Y2 248 aaKnown RBP6.4□□□□□ -1.38
ATG4A-206ENST00000457035 SMR3BP02814 79 aaPredicted RBP6.39□□□□□ -1.39
ATG4A-206ENST00000457035 SPINK8P0C7L1 97 aa6.39□□□□□ -1.39
ATG4A-206ENST00000457035 C6orf226Q5I0X4 101 aa6.39□□□□□ -1.39
ATG4A-206ENST00000457035 SPACA4Q8TDM5 124 aa6.39□□□□□ -1.39
ATG4A-206ENST00000457035 TOMM7Q9P0U1 55 aa6.39□□□□□ -1.39
ATG4A-206ENST00000457035 C6orf48Q9UBA6 75 aa6.39□□□□□ -1.39
ATG4A-206ENST00000457035 HSPB8Q9UJY1 196 aa6.39□□□□□ -1.39
ATG4A-206ENST00000457035 A0A096LNI7 61 aa6.38□□□□□ -1.39
ATG4A-206ENST00000457035 IGLV5-39A0A0G2JS06 123 aa6.38□□□□□ -1.39
ATG4A-206ENST00000457035 TRBV30A0A0K0K1B3 111 aa6.38□□□□□ -1.39
ATG4A-206ENST00000457035 LOC107984640A0A0U1RRK4 108 aa6.38□□□□□ -1.39
ATG4A-206ENST00000457035 F8VRH5 84 aa6.38□□□□□ -1.39
ATG4A-206ENST00000457035 H3BRM9 83 aa6.38□□□□□ -1.39
ATG4A-206ENST00000457035 PRSS2P07478 247 aa6.38□□□□□ -1.39
ATG4A-206ENST00000457035 ODF1Q14990 250 aa6.38□□□□□ -1.39
ATG4A-206ENST00000457035 A0A087WYN8 130 aa6.37□□□□□ -1.39
ATG4A-206ENST00000457035 IGKV2-24A0A0C4DH68 120 aa6.37□□□□□ -1.39
ATG4A-206ENST00000457035 TLX1NBP0CAT3 122 aa6.37□□□□□ -1.39
ATG4A-206ENST00000457035 PTTG1IPP53801 180 aa6.37□□□□□ -1.39
ATG4A-206ENST00000457035 LCE4AQ5TA78 99 aa6.37□□□□□ -1.39
ATG4A-206ENST00000457035 COX7B2Q8TF08 81 aa6.37□□□□□ -1.39
ATG4A-206ENST00000457035 DPH3Q96FX2 82 aa6.37□□□□□ -1.39
ATG4A-206ENST00000457035 H0Y8G0 127 aa6.36□□□□□ -1.39
ATG4A-206ENST00000457035 INAFM2P0DMQ5 153 aa6.36□□□□□ -1.39
ATG4A-206ENST00000457035 CKS1BP61024 79 aa6.36□□□□□ -1.39
ATG4A-206ENST00000457035 GAGE2BQ13066 116 aa6.36□□□□□ -1.39
ATG4A-206ENST00000457035 MAJINQ3KP22 176 aa6.36□□□□□ -1.39
ATG4A-206ENST00000457035 C9orf116Q5BN46 136 aaPredicted RBP6.36□□□□□ -1.39
ATG4A-206ENST00000457035 TMEM170BQ5T4T1 132 aa6.36□□□□□ -1.39
ATG4A-206ENST00000457035 PLAC8Q9NZF1 115 aa6.36□□□□□ -1.39
ATG4A-206ENST00000457035 PKIGQ9Y2B9 76 aa6.36□□□□□ -1.39
ATG4A-206ENST00000457035 TMEM223A0PJW6 202 aa6.35□□□□□ -1.39
ATG4A-206ENST00000457035 CXCL5P42830 114 aa6.35□□□□□ -1.39
ATG4A-206ENST00000457035 Q5VSD8 79 aa6.35□□□□□ -1.39
ATG4A-206ENST00000457035 Q6ZRP5 223 aa6.35□□□□□ -1.39
ATG4A-206ENST00000457035 MAP1LC3CQ9BXW4 147 aa6.35□□□□□ -1.39
ATG4A-206ENST00000457035 LINC00474Q9P2X8 69 aa6.35□□□□□ -1.39
ATG4A-206ENST00000457035 SRRM2Q9UQ35 2752 aaKnown RBP6.35□□□□□ -1.39
ATG4A-206ENST00000457035 STPG4Q8N801 248 aa6.34□□□□□ -1.39
ATG4A-206ENST00000457035 KRTAP4-7Q9BYR0 210 aa6.34□□□□□ -1.39
ATG4A-206ENST00000457035 A0A1W2PNN7 141 aa6.33□□□□□ -1.4
ATG4A-206ENST00000457035 NDUFC2-KCTD14E9PQ53 114 aa6.33□□□□□ -1.4
ATG4A-206ENST00000457035 SYS1-DBNDD2H3BUS1 97 aa6.33□□□□□ -1.4
ATG4A-206ENST00000457035 RPL18AQ02543 176 aaKnown RBP6.33□□□□□ -1.4
ATG4A-206ENST00000457035 PMCHL2Q9BQD1 86 aa6.33□□□□□ -1.4
ATG4A-206ENST00000457035 FLG2Q5D862 2391 aaPredicted RBP6.32□□□□□ -1.4
ATG4A-206ENST00000457035 DPM2O94777 84 aa6.32□□□□□ -1.4
ATG4A-206ENST00000457035 GAGE2EQ4V326 116 aa6.32□□□□□ -1.4
ATG4A-206ENST00000457035 GAGE2DQ9UEU5 116 aa6.32□□□□□ -1.4
ATG4A-206ENST00000457035 IGKCP01834 107 aa6.31□□□□□ -1.4
ATG4A-206ENST00000457035 C3orf79P0CE67 100 aa6.31□□□□□ -1.4
ATG4A-206ENST00000457035 PLNP26678 52 aa6.31□□□□□ -1.4
ATG4A-206ENST00000457035 KRTAP10-4P60372 401 aaPredicted RBP6.31□□□□□ -1.4
ATG4A-206ENST00000457035 LINC01545Q5VT33 79 aa6.31□□□□□ -1.4
ATG4A-206ENST00000457035 PET117Q6UWS5 81 aa6.31□□□□□ -1.4
ATG4A-206ENST00000457035 PKHD1L1Q86WI1 4243 aa6.3□□□□□ -1.4
ATG4A-206ENST00000457035 C9orf129Q5T035 196 aaKnown RBP6.3□□□□□ -1.4
ATG4A-206ENST00000457035 KRTAP7-1Q8IUC3 87 aa6.3□□□□□ -1.4
ATG4A-206ENST00000457035 HIST3H2BBQ8N257 126 aa6.3□□□□□ -1.4
ATG4A-206ENST00000457035 ZNF625Q96I27 306 aaPredicted RBP6.3□□□□□ -1.4
ATG4A-206ENST00000457035 FAM168BA1KXE4 195 aa6.29□□□□□ -1.4
ATG4A-206ENST00000457035 KRTAP9-7A8MTY7 169 aa6.28□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 50.2 ms