RNA–Protein interactions for RNA: ENST00000456953.5

SNHG17-208, Transcript of small nucleolar RNA host gene 17, humanhuman

TSL 3 BASIC

Gene SNHG17, Length 546 nt, Biotype lincRNA, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG17-208ENST00000456953 A0A0U1RQV1 116 aa8.18□□□□□ -1.1
SNHG17-208ENST00000456953 H0Y8G0 127 aa8.18□□□□□ -1.1
SNHG17-208ENST00000456953 SNRPEP62304 92 aaKnown RBP8.18□□□□□ -1.1
SNHG17-208ENST00000456953 SRSF9Q13242 221 aaKnown RBP eCLIP8.18□□□□□ -1.1
SNHG17-208ENST00000456953 LINC00173Q6ZV60 143 aa8.18□□□□□ -1.1
SNHG17-208ENST00000456953 STPG4Q8N801 248 aa8.18□□□□□ -1.1
SNHG17-208ENST00000456953 PACRGQ96M98 296 aaPredicted RBP8.18□□□□□ -1.1
SNHG17-208ENST00000456953 MAP1LC3CQ9BXW4 147 aa8.18□□□□□ -1.1
SNHG17-208ENST00000456953 IGKV2-24A0A0C4DH68 120 aa8.17□□□□□ -1.1
SNHG17-208ENST00000456953 GAGE12HA6NDE8 117 aa8.17□□□□□ -1.1
SNHG17-208ENST00000456953 UBE2D1P51668 147 aa8.17□□□□□ -1.1
SNHG17-208ENST00000456953 SEC11AP67812 179 aa8.17□□□□□ -1.1
SNHG17-208ENST00000456953 HIST3H2BBQ8N257 126 aa8.17□□□□□ -1.1
SNHG17-208ENST00000456953 GEMIN7Q9H840 131 aaKnown RBP8.17□□□□□ -1.1
SNHG17-208ENST00000456953 TRAV12-1A0A0B4J245 112 aa8.15□□□□□ -1.1
SNHG17-208ENST00000456953 C5orf52A6NGY3 159 aa8.15□□□□□ -1.1
SNHG17-208ENST00000456953 KRTDAPP60985 99 aa8.15□□□□□ -1.1
SNHG17-208ENST00000456953 LINC00242Q5T6M2 205 aa8.15□□□□□ -1.1
SNHG17-208ENST00000456953 CD164L2Q6UWJ8 174 aa8.15□□□□□ -1.1
SNHG17-208ENST00000456953 CHTOPQ9Y3Y2 248 aaKnown RBP8.15□□□□□ -1.1
SNHG17-208ENST00000456953 CFAP161Q6P656 301 aa8.14□□□□□ -1.11
SNHG17-208ENST00000456953 Q6ZRP5 223 aa8.14□□□□□ -1.11
SNHG17-208ENST00000456953 C15orf56Q8N910 161 aa8.14□□□□□ -1.11
SNHG17-208ENST00000456953 HIST1H2BLQ99880 126 aa8.14□□□□□ -1.11
SNHG17-208ENST00000456953 LINC00474Q9P2X8 69 aa8.14□□□□□ -1.11
SNHG17-208ENST00000456953 SYS1-DBNDD2H3BUS1 97 aa8.13□□□□□ -1.11
SNHG17-208ENST00000456953 COX7A2LO14548 114 aa8.13□□□□□ -1.11
SNHG17-208ENST00000456953 MALP21145 153 aa8.13□□□□□ -1.11
SNHG17-208ENST00000456953 HERVK_113P63121 156 aa8.13□□□□□ -1.11
SNHG17-208ENST00000456953 FOXI1Q12951 378 aa8.13□□□□□ -1.11
SNHG17-208ENST00000456953 TINCRA0A1B0GVN0 87 aa8.12□□□□□ -1.11
SNHG17-208ENST00000456953 C5orf38Q86SI9 138 aa8.12□□□□□ -1.11
SNHG17-208ENST00000456953 LINC00469Q8N7U9 141 aa8.12□□□□□ -1.11
SNHG17-208ENST00000456953 MRPL35Q9NZE8 188 aaKnown RBP8.12□□□□□ -1.11
SNHG17-208ENST00000456953 A0A096LNI7 61 aa8.11□□□□□ -1.11
SNHG17-208ENST00000456953 IGHV3OR16-9A0A0B4J2B5 98 aa8.11□□□□□ -1.11
SNHG17-208ENST00000456953 F8VRH5 84 aa8.11□□□□□ -1.11
SNHG17-208ENST00000456953 C3orf79P0CE67 100 aa8.11□□□□□ -1.11
SNHG17-208ENST00000456953 IGLC3P0DOY3 106 aa8.11□□□□□ -1.11
SNHG17-208ENST00000456953 PET117Q6UWS5 81 aa8.11□□□□□ -1.11
SNHG17-208ENST00000456953 FAM19A3Q7Z5A8 133 aa8.11□□□□□ -1.11
SNHG17-208ENST00000456953 IGLV4-69A0A075B6H9 119 aa8.1□□□□□ -1.11
SNHG17-208ENST00000456953 C20orf202A1L168 122 aa8.1□□□□□ -1.11
SNHG17-208ENST00000456953 H3BRM9 83 aa8.1□□□□□ -1.11
SNHG17-208ENST00000456953 APOMO95445 188 aa8.1□□□□□ -1.11
SNHG17-208ENST00000456953 HIGD2BQ4VC39 106 aa8.1□□□□□ -1.11
SNHG17-208ENST00000456953 PMCHL2Q9BQD1 86 aa8.1□□□□□ -1.11
SNHG17-208ENST00000456953 PKIGQ9Y2B9 76 aa8.1□□□□□ -1.11
SNHG17-208ENST00000456953 A0A087WZ39 114 aa8.09□□□□□ -1.11
SNHG17-208ENST00000456953 IGHV1-58A0A0C4DH39 117 aa8.09□□□□□ -1.11
SNHG17-208ENST00000456953 C11orf86A6NJI1 115 aa8.09□□□□□ -1.11
SNHG17-208ENST00000456953 DPM2O94777 84 aa8.09□□□□□ -1.11
SNHG17-208ENST00000456953 PLNP26678 52 aa8.09□□□□□ -1.11
SNHG17-208ENST00000456953 TMEM170BQ5T4T1 132 aa8.09□□□□□ -1.11
SNHG17-208ENST00000456953 CDKN2A-AS1Q9UH64 79 aa8.09□□□□□ -1.11
SNHG17-208ENST00000456953 PSORS1C2Q9UIG4 136 aa8.09□□□□□ -1.11
SNHG17-208ENST00000456953 GVQW2A0A096LPI5 108 aaPredicted RBP8.08□□□□□ -1.12
SNHG17-208ENST00000456953 OR10D4PQ8NGN7 298 aa8.08□□□□□ -1.12
SNHG17-208ENST00000456953 IGLV5-45A0A087WSX0 123 aa8.07□□□□□ -1.12
SNHG17-208ENST00000456953 IGKCP01834 107 aa8.07□□□□□ -1.12
SNHG17-208ENST00000456953 ZNF22P17026 224 aaPredicted RBP8.07□□□□□ -1.12
SNHG17-208ENST00000456953 LCE2AQ5TA79 106 aaPredicted RBP8.07□□□□□ -1.12
SNHG17-208ENST00000456953 LINC01545Q5VT33 79 aa8.07□□□□□ -1.12
SNHG17-208ENST00000456953 LINC01561Q8N1V8 128 aa8.06□□□□□ -1.12
SNHG17-208ENST00000456953 ORAOV1Q8WV07 137 aa8.06□□□□□ -1.12
SNHG17-208ENST00000456953 ZNF561-AS1K7EIQ3 104 aa8.05□□□□□ -1.12
SNHG17-208ENST00000456953 PRSS2P07478 247 aa8.05□□□□□ -1.12
SNHG17-208ENST00000456953 SPINK8P0C7L1 97 aa8.05□□□□□ -1.12
SNHG17-208ENST00000456953 AKR1D1P51857 326 aa8.05□□□□□ -1.12
SNHG17-208ENST00000456953 SPAG11BQ08648 103 aa8.05□□□□□ -1.12
SNHG17-208ENST00000456953 SMIM1B2RUZ4 78 aa8.04□□□□□ -1.12
SNHG17-208ENST00000456953 TOMM7Q9P0U1 55 aa8.04□□□□□ -1.12
SNHG17-208ENST00000456953 TMEM223A0PJW6 202 aa8.03□□□□□ -1.12
SNHG17-208ENST00000456953 SCGB1D1O95968 90 aa8.03□□□□□ -1.12
SNHG17-208ENST00000456953 HERVK_113P61574 105 aa8.03□□□□□ -1.12
SNHG17-208ENST00000456953 PRR4Q16378 134 aa8.02□□□□□ -1.13
SNHG17-208ENST00000456953 C6orf226Q5I0X4 101 aa8.02□□□□□ -1.13
SNHG17-208ENST00000456953 PRR26Q8N8Z3 221 aa8.02□□□□□ -1.13
SNHG17-208ENST00000456953 LINC00526Q96FQ7 95 aa8.02□□□□□ -1.13
SNHG17-208ENST00000456953 CKS1BP61024 79 aa8.01□□□□□ -1.13
SNHG17-208ENST00000456953 ATOH7Q8N100 152 aa8.01□□□□□ -1.13
SNHG17-208ENST00000456953 COX7B2Q8TF08 81 aa8.01□□□□□ -1.13
SNHG17-208ENST00000456953 CARD19Q96LW7 228 aa8.01□□□□□ -1.13
SNHG17-208ENST00000456953 CAMK2N2Q96S95 79 aa8.01□□□□□ -1.13
SNHG17-208ENST00000456953 Q8IZM0 81 aa8□□□□□ -1.13
SNHG17-208ENST00000456953 IGLV5-39A0A0G2JS06 123 aa7.99□□□□□ -1.13
SNHG17-208ENST00000456953 HSBP1L1C9JCN9 74 aa7.99□□□□□ -1.13
SNHG17-208ENST00000456953 NDUFA1O15239 70 aa7.99□□□□□ -1.13
SNHG17-208ENST00000456953 PTTG1IPP53801 180 aa7.99□□□□□ -1.13
SNHG17-208ENST00000456953 SYCNQ0VAF6 134 aa7.99□□□□□ -1.13
SNHG17-208ENST00000456953 DIRC1Q969H9 104 aa7.99□□□□□ -1.13
SNHG17-208ENST00000456953 C2orf48Q96LS8 159 aa7.99□□□□□ -1.13
SNHG17-208ENST00000456953 F8WDY8 70 aa7.98□□□□□ -1.13
SNHG17-208ENST00000456953 CXCL5P42830 114 aa7.98□□□□□ -1.13
SNHG17-208ENST00000456953 KIAA0087Q14695 138 aa7.98□□□□□ -1.13
SNHG17-208ENST00000456953 PLEKHB2Q96CS7 222 aa7.98□□□□□ -1.13
SNHG17-208ENST00000456953 LEPROTO15243 131 aa7.97□□□□□ -1.13
SNHG17-208ENST00000456953 LGALS3P17931 250 aaKnown RBP7.97□□□□□ -1.13
SNHG17-208ENST00000456953 C1orf137Q5JT78 98 aa7.97□□□□□ -1.13
SNHG17-208ENST00000456953 C2orf82Q6UX34 121 aa7.97□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 67.7 ms