RNA–Protein interactions for RNA: ENST00000456315.6

DEPDC1-202, Transcript of DEP domain containing 1, humanhuman

TSL 1 (best) BASIC

Gene DEPDC1, Length 5,331 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC1-202ENST00000456315 IGHV1-69P01742 117 aa3.16□□□□□ -1.9
DEPDC1-202ENST00000456315 LINC00612Q8N6U2 182 aa3.16□□□□□ -1.9
DEPDC1-202ENST00000456315 IL17DQ8TAD2 202 aa3.16□□□□□ -1.9
DEPDC1-202ENST00000456315 TM2D3Q9BRN9 247 aa3.16□□□□□ -1.9
DEPDC1-202ENST00000456315 Q8N3U1 123 aa3.15□□□□□ -1.9
DEPDC1-202ENST00000456315 C11orf68Q9H3H3 251 aaKnown RBP3.15□□□□□ -1.9
DEPDC1-202ENST00000456315 A0A0U1RQV1 116 aa3.15□□□□□ -1.91
DEPDC1-202ENST00000456315 PAPPA-AS1Q5QFB9 102 aa3.15□□□□□ -1.91
DEPDC1-202ENST00000456315 VPS13DQ5THJ4 4388 aa3.15□□□□□ -1.91
DEPDC1-202ENST00000456315 IGLV4-60A0A075B6I1 120 aa3.15□□□□□ -1.91
DEPDC1-202ENST00000456315 LOC100131303A0A0U1RQF7 123 aa3.15□□□□□ -1.91
DEPDC1-202ENST00000456315 MALP21145 153 aa3.15□□□□□ -1.91
DEPDC1-202ENST00000456315 Q8N9L7 120 aa3.15□□□□□ -1.91
DEPDC1-202ENST00000456315 IGHV4-38-2P0DP08 117 aa3.14□□□□□ -1.91
DEPDC1-202ENST00000456315 MRPL53Q96EL3 112 aaKnown RBP3.14□□□□□ -1.91
DEPDC1-202ENST00000456315 NDUFA1O15239 70 aa3.14□□□□□ -1.91
DEPDC1-202ENST00000456315 ZNF843Q8N446 348 aa3.14□□□□□ -1.91
DEPDC1-202ENST00000456315 XCL1P47992 114 aa3.14□□□□□ -1.91
DEPDC1-202ENST00000456315 LYRM7Q5U5X0 104 aa3.14□□□□□ -1.91
DEPDC1-202ENST00000456315 C11orf71Q6IPW1 123 aa3.14□□□□□ -1.91
DEPDC1-202ENST00000456315 ENHOQ6UWT2 76 aa3.14□□□□□ -1.91
DEPDC1-202ENST00000456315 DEFB124Q8NES8 71 aa3.14□□□□□ -1.91
DEPDC1-202ENST00000456315 XCL2Q9UBD3 114 aa3.14□□□□□ -1.91
DEPDC1-202ENST00000456315 IGHV3OR16-9A0A0B4J2B5 98 aa3.14□□□□□ -1.91
DEPDC1-202ENST00000456315 DEFB136Q30KP8 78 aa3.13□□□□□ -1.91
DEPDC1-202ENST00000456315 DNAH3Q8TD57 4116 aa3.13□□□□□ -1.91
DEPDC1-202ENST00000456315 TRACP01848 142 aa3.13□□□□□ -1.91
DEPDC1-202ENST00000456315 C9orf116Q5BN46 136 aaPredicted RBP3.13□□□□□ -1.91
DEPDC1-202ENST00000456315 IGFL3Q6UXB1 125 aa3.13□□□□□ -1.91
DEPDC1-202ENST00000456315 PRIMA1Q86XR5 153 aa3.13□□□□□ -1.91
DEPDC1-202ENST00000456315 CCL21O00585 134 aa3.13□□□□□ -1.91
DEPDC1-202ENST00000456315 LY6EQ16553 131 aa3.13□□□□□ -1.91
DEPDC1-202ENST00000456315 FAM222AQ5U5X8 452 aa3.13□□□□□ -1.91
DEPDC1-202ENST00000456315 HIST2H2BCQ6DN03 193 aa3.13□□□□□ -1.91
DEPDC1-202ENST00000456315 A0A087WZ39 114 aa3.13□□□□□ -1.91
DEPDC1-202ENST00000456315 MED14OSP0DP75 135 aa3.13□□□□□ -1.91
DEPDC1-202ENST00000456315 SPANXA1Q9NS26 97 aa3.13□□□□□ -1.91
DEPDC1-202ENST00000456315 GHRHP01286 108 aa3.12□□□□□ -1.91
DEPDC1-202ENST00000456315 C1orf43Q9BWL3 253 aa3.12□□□□□ -1.91
DEPDC1-202ENST00000456315 IGHV3-53P01767 116 aa3.12□□□□□ -1.91
DEPDC1-202ENST00000456315 CCKP06307 115 aa3.12□□□□□ -1.91
DEPDC1-202ENST00000456315 LRCOL1A6NCL2 159 aa3.12□□□□□ -1.91
DEPDC1-202ENST00000456315 GIG44P09565 113 aaPredicted RBP3.12□□□□□ -1.91
DEPDC1-202ENST00000456315 COX6CP09669 75 aa3.12□□□□□ -1.91
DEPDC1-202ENST00000456315 SCXQ7RTU7 201 aa3.12□□□□□ -1.91
DEPDC1-202ENST00000456315 CDC42SE2Q9NRR3 84 aa3.12□□□□□ -1.91
DEPDC1-202ENST00000456315 TMEM258P61165 79 aa3.12□□□□□ -1.91
DEPDC1-202ENST00000456315 ZNF415Q09FC8 603 aa3.12□□□□□ -1.91
DEPDC1-202ENST00000456315 ATOX1O00244 68 aa3.11□□□□□ -1.91
DEPDC1-202ENST00000456315 BBC3Q96PG8 261 aaPredicted RBP3.11□□□□□ -1.91
DEPDC1-202ENST00000456315 HYDINQ4G0P3 5121 aa3.11□□□□□ -1.91
DEPDC1-202ENST00000456315 WFDC10AQ9H1F0 79 aa3.11□□□□□ -1.91
DEPDC1-202ENST00000456315 SND1-IT1Q9HBX3 110 aa3.11□□□□□ -1.91
DEPDC1-202ENST00000456315 PRKDCP78527 4128 aaKnown RBP3.11□□□□□ -1.91
DEPDC1-202ENST00000456315 H3BUX3 64 aa3.11□□□□□ -1.91
DEPDC1-202ENST00000456315 TRBV7-4A0A0J9YYF1 115 aa3.1□□□□□ -1.91
DEPDC1-202ENST00000456315 TIMM17BO60830 172 aa3.1□□□□□ -1.91
DEPDC1-202ENST00000456315 IGLV1-40P01703 118 aa3.1□□□□□ -1.91
DEPDC1-202ENST00000456315 KRTAP21-3Q3LHN1 58 aa3.1□□□□□ -1.91
DEPDC1-202ENST00000456315 LINC01356Q8N9X3 169 aa3.1□□□□□ -1.91
DEPDC1-202ENST00000456315 PKHD1P08F94 4074 aa3.1□□□□□ -1.91
DEPDC1-202ENST00000456315 NDUFA4O00483 81 aa3.1□□□□□ -1.91
DEPDC1-202ENST00000456315 RPL36AP83881 106 aaKnown RBP3.1□□□□□ -1.91
DEPDC1-202ENST00000456315 KLKP1Q107X0 134 aa3.1□□□□□ -1.91
DEPDC1-202ENST00000456315 C10orf25Q5T742 122 aa3.1□□□□□ -1.91
DEPDC1-202ENST00000456315 RPL36ALQ969Q0 106 aaKnown RBP3.1□□□□□ -1.91
DEPDC1-202ENST00000456315 PRO0628Q9UI54 55 aa3.1□□□□□ -1.91
DEPDC1-202ENST00000456315 C1orf158Q8N1D5 194 aa3.1□□□□□ -1.91
DEPDC1-202ENST00000456315 IGHV4-61A0A0C4DH41 118 aa3.1□□□□□ -1.91
DEPDC1-202ENST00000456315 IGKV3OR2-268A0A0C4DH90 116 aa3.1□□□□□ -1.91
DEPDC1-202ENST00000456315 PLAC8L1A1L4L8 177 aa3.09□□□□□ -1.91
DEPDC1-202ENST00000456315 UCNP55089 124 aa3.09□□□□□ -1.91
DEPDC1-202ENST00000456315 ADORA2A-AS1P86434 159 aa3.09□□□□□ -1.91
DEPDC1-202ENST00000456315 Q6JHZ5 121 aa3.09□□□□□ -1.91
DEPDC1-202ENST00000456315 MAPK1IP1LQ8NDC0 245 aa3.09□□□□□ -1.91
DEPDC1-202ENST00000456315 PAX4O43316 350 aa3.09□□□□□ -1.91
DEPDC1-202ENST00000456315 ACYP1P07311 99 aa3.09□□□□□ -1.91
DEPDC1-202ENST00000456315 TOMM7Q9P0U1 55 aa3.09□□□□□ -1.91
DEPDC1-202ENST00000456315 MYCBP2O75592 4640 aa3.09□□□□□ -1.91
DEPDC1-202ENST00000456315 LINC01006Q8NI28 216 aa3.09□□□□□ -1.91
DEPDC1-202ENST00000456315 PPP1R17O96001 155 aa3.09□□□□□ -1.92
DEPDC1-202ENST00000456315 DEFB131AP59861 70 aa3.09□□□□□ -1.92
DEPDC1-202ENST00000456315 PSMB8P28062 276 aa3.08□□□□□ -1.92
DEPDC1-202ENST00000456315 F8WEM9 126 aa3.08□□□□□ -1.92
DEPDC1-202ENST00000456315 KIAA0087Q14695 138 aa3.08□□□□□ -1.92
DEPDC1-202ENST00000456315 ODF3L2Q3SX64 289 aa3.08□□□□□ -1.92
DEPDC1-202ENST00000456315 CD164L2Q6UWJ8 174 aa3.08□□□□□ -1.92
DEPDC1-202ENST00000456315 OR13C6PQ8NH95 151 aa3.08□□□□□ -1.92
DEPDC1-202ENST00000456315 DNAL4O96015 105 aa3.07□□□□□ -1.92
DEPDC1-202ENST00000456315 IGHV4-59P01825 116 aa3.07□□□□□ -1.92
DEPDC1-202ENST00000456315 LINC01547P58512 204 aaPredicted RBP3.07□□□□□ -1.92
DEPDC1-202ENST00000456315 C6orf99Q4VX62 202 aa3.07□□□□□ -1.92
DEPDC1-202ENST00000456315 UBE2E2Q96LR5 201 aa3.07□□□□□ -1.92
DEPDC1-202ENST00000456315 DNAH2Q9P225 4427 aa3.07□□□□□ -1.92
DEPDC1-202ENST00000456315 MPLKIPQ8TAP9 179 aa3.07□□□□□ -1.92
DEPDC1-202ENST00000456315 MINOS1-NBL1R4GNA1 71 aa3.07□□□□□ -1.92
DEPDC1-202ENST00000456315 Q6ZVQ6 151 aa3.07□□□□□ -1.92
DEPDC1-202ENST00000456315 NBL1P41271 181 aa3.06□□□□□ -1.92
DEPDC1-202ENST00000456315 Q6ZRP5 223 aa3.06□□□□□ -1.92
DEPDC1-202ENST00000456315 Q6ZTC4 211 aa3.06□□□□□ -1.92
Retrieved 100 of 20,778 RNA–protein pairs in 52.4 ms