RNA–Protein interactions for RNA: ENST00000456040.1

R3HDM1-212, Transcript of R3H domain containing 1, humanhuman

TSL 5

Gene R3HDM1, Length 851 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
R3HDM1-212ENST00000456040 CHD3Q12873 2000 aaKnown RBP1.56□□□□□ -2.16
R3HDM1-212ENST00000456040 NBEAQ8NFP9 2946 aa1.55□□□□□ -2.16
R3HDM1-212ENST00000456040 WDFY3Q8IZQ1 3526 aa1.55□□□□□ -2.16
R3HDM1-212ENST00000456040 ZFYVE26Q68DK2 2539 aa1.55□□□□□ -2.16
R3HDM1-212ENST00000456040 IGHV1-24A0A0C4DH33 117 aa1.55□□□□□ -2.16
R3HDM1-212ENST00000456040 A0A0G2JQZ4 141 aa1.55□□□□□ -2.16
R3HDM1-212ENST00000456040 TCRBV4S1A1TA0A5B7 111 aa1.55□□□□□ -2.16
R3HDM1-212ENST00000456040 SDHAF1A6NFY7 115 aa1.55□□□□□ -2.16
R3HDM1-212ENST00000456040 FAM223BA6NKX1 122 aa1.55□□□□□ -2.16
R3HDM1-212ENST00000456040 ZNF705FA8MVS1 300 aaPredicted RBP1.55□□□□□ -2.16
R3HDM1-212ENST00000456040 J3QKU1 62 aa1.55□□□□□ -2.16
R3HDM1-212ENST00000456040 NDUFA3O95167 84 aa1.55□□□□□ -2.16
R3HDM1-212ENST00000456040 S100A8P05109 93 aa1.55□□□□□ -2.16
R3HDM1-212ENST00000456040 MIFP14174 115 aa1.55□□□□□ -2.16
R3HDM1-212ENST00000456040 GNG4P50150 75 aa1.55□□□□□ -2.16
R3HDM1-212ENST00000456040 UBE2G1P62253 170 aa1.55□□□□□ -2.16
R3HDM1-212ENST00000456040 UBE2L3P68036 154 aaKnown RBP1.55□□□□□ -2.16
R3HDM1-212ENST00000456040 PDE6HQ13956 83 aa1.55□□□□□ -2.16
R3HDM1-212ENST00000456040 FXYD3Q14802 87 aa1.55□□□□□ -2.16
R3HDM1-212ENST00000456040 MIC13Q5XKP0 118 aa1.55□□□□□ -2.16
R3HDM1-212ENST00000456040 CYP2G1PQ6ZSU1 146 aa1.55□□□□□ -2.16
R3HDM1-212ENST00000456040 Q6ZTI0 123 aa1.55□□□□□ -2.16
R3HDM1-212ENST00000456040 FAM223AQ8IWN6 122 aa1.55□□□□□ -2.16
R3HDM1-212ENST00000456040 FAM19A2Q8N3H0 131 aa1.55□□□□□ -2.16
R3HDM1-212ENST00000456040 TMEM254Q8TBM7 123 aa1.55□□□□□ -2.16
R3HDM1-212ENST00000456040 C10orf105Q8TEF2 133 aa1.55□□□□□ -2.16
R3HDM1-212ENST00000456040 ZCCHC13Q8WW36 166 aaKnown RBP1.55□□□□□ -2.16
R3HDM1-212ENST00000456040 LEAP2Q969E1 77 aa1.55□□□□□ -2.16
R3HDM1-212ENST00000456040 LINC00052Q96N35 136 aa1.55□□□□□ -2.16
R3HDM1-212ENST00000456040 TIMM21Q9BVV7 248 aa1.55□□□□□ -2.16
R3HDM1-212ENST00000456040 REG4Q9BYZ8 158 aa1.55□□□□□ -2.16
R3HDM1-212ENST00000456040 BPESC1Q9GZL8 116 aa1.55□□□□□ -2.16
R3HDM1-212ENST00000456040 RPRMQ9NS64 109 aa1.55□□□□□ -2.16
R3HDM1-212ENST00000456040 PRO2289Q9P1D8 64 aa1.55□□□□□ -2.16
R3HDM1-212ENST00000456040 HILPDAQ9Y5L2 63 aa1.55□□□□□ -2.16
R3HDM1-212ENST00000456040 SPEGQ15772 3267 aa1.55□□□□□ -2.16
R3HDM1-212ENST00000456040 LOC400499M0QZD8 3231 aa1.55□□□□□ -2.16
R3HDM1-212ENST00000456040 SPG11Q96JI7 2443 aa1.55□□□□□ -2.16
R3HDM1-212ENST00000456040 USP9XQ93008 2570 aaPredicted RBP1.54□□□□□ -2.16
R3HDM1-212ENST00000456040 USP24Q9UPU5 2620 aa1.54□□□□□ -2.16
R3HDM1-212ENST00000456040 UBR5O95071 2799 aaPredicted RBP1.54□□□□□ -2.16
R3HDM1-212ENST00000456040 MAP1AP78559 2803 aaPredicted RBP1.54□□□□□ -2.16
R3HDM1-212ENST00000456040 TACC2O95359 2948 aa1.54□□□□□ -2.16
R3HDM1-212ENST00000456040 DOCK11Q5JSL3 2073 aa1.54□□□□□ -2.16
R3HDM1-212ENST00000456040 ARFGEF3Q5TH69 2177 aa1.54□□□□□ -2.16
R3HDM1-212ENST00000456040 IGLC7A0M8Q6 106 aa1.54□□□□□ -2.16
R3HDM1-212ENST00000456040 LYNX1G3V0Z9 82 aa1.54□□□□□ -2.16
R3HDM1-212ENST00000456040 H3BQ15 152 aa1.54□□□□□ -2.16
R3HDM1-212ENST00000456040 P0C880 135 aa1.54□□□□□ -2.16
R3HDM1-212ENST00000456040 ARL14EPLP0DKL9 152 aa1.54□□□□□ -2.16
R3HDM1-212ENST00000456040 LYNX1P0DP58 116 aa1.54□□□□□ -2.16
R3HDM1-212ENST00000456040 GCHFRP30047 84 aa1.54□□□□□ -2.16
R3HDM1-212ENST00000456040 ADIRFQ15847 76 aa1.54□□□□□ -2.16
R3HDM1-212ENST00000456040 Q56UQ5 140 aa1.54□□□□□ -2.16
R3HDM1-212ENST00000456040 SPINK9Q5DT21 86 aa1.54□□□□□ -2.16
R3HDM1-212ENST00000456040 Q6AWC8 147 aa1.54□□□□□ -2.16
R3HDM1-212ENST00000456040 HCP5Q6MZN7 132 aa1.54□□□□□ -2.16
R3HDM1-212ENST00000456040 UNQ5815/PRO19632Q6UWF5 114 aa1.54□□□□□ -2.16
R3HDM1-212ENST00000456040 ATOH7Q8N100 152 aa1.54□□□□□ -2.16
R3HDM1-212ENST00000456040 TTC9CQ8N5M4 171 aa1.54□□□□□ -2.16
R3HDM1-212ENST00000456040 C5orf17Q8NAS9 161 aa1.54□□□□□ -2.16
R3HDM1-212ENST00000456040 MGST2Q99735 147 aa1.54□□□□□ -2.16
R3HDM1-212ENST00000456040 TMEM14CQ9P0S9 112 aa1.54□□□□□ -2.16
R3HDM1-212ENST00000456040 RABAC1Q9UI14 185 aa1.54□□□□□ -2.16
R3HDM1-212ENST00000456040 ZFP30Q9Y2G7 519 aa1.54□□□□□ -2.16
R3HDM1-212ENST00000456040 USP9YO00507 2555 aaPredicted RBP1.54□□□□□ -2.16
R3HDM1-212ENST00000456040 CHD6Q8TD26 2715 aa1.54□□□□□ -2.16
R3HDM1-212ENST00000456040 WNK2Q9Y3S1 2297 aa1.54□□□□□ -2.16
R3HDM1-212ENST00000456040 ANKRD17O75179 2603 aaKnown RBP1.53□□□□□ -2.16
R3HDM1-212ENST00000456040 TRAV12-2A0A075B6T6 113 aa1.53□□□□□ -2.16
R3HDM1-212ENST00000456040 TRAV10A0A0B4J240 114 aa1.53□□□□□ -2.16
R3HDM1-212ENST00000456040 TRBV6-1A0A0K0K1D8 114 aa1.53□□□□□ -2.16
R3HDM1-212ENST00000456040 C7orf77A4D0Y5 90 aa1.53□□□□□ -2.16
R3HDM1-212ENST00000456040 C2orf70A6NJV1 201 aa1.53□□□□□ -2.16
R3HDM1-212ENST00000456040 A6NN06 94 aa1.53□□□□□ -2.16
R3HDM1-212ENST00000456040 MYO9AB2RTY4 2548 aa1.53□□□□□ -2.16
R3HDM1-212ENST00000456040 E7EUB6 86 aa1.53□□□□□ -2.16
R3HDM1-212ENST00000456040 NDUFA4O00483 81 aa1.53□□□□□ -2.16
R3HDM1-212ENST00000456040 TFF1P04155 84 aa1.53□□□□□ -2.16
R3HDM1-212ENST00000456040 LRBAP50851 2863 aa1.53□□□□□ -2.16
R3HDM1-212ENST00000456040 TPPP2P59282 170 aa1.53□□□□□ -2.16
R3HDM1-212ENST00000456040 WT1-ASQ06250 92 aa1.53□□□□□ -2.16
R3HDM1-212ENST00000456040 PTPN13Q12923 2485 aa1.53□□□□□ -2.16
R3HDM1-212ENST00000456040 KLK9Q2XQG4 91 aa1.53□□□□□ -2.16
R3HDM1-212ENST00000456040 KRTAP6-3Q3LI67 103 aa1.53□□□□□ -2.16
R3HDM1-212ENST00000456040 SPRNQ5BIV9 151 aa1.53□□□□□ -2.16
R3HDM1-212ENST00000456040 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP1.53□□□□□ -2.165e-11■■■■■ 171.9
R3HDM1-212ENST00000456040 BAGE2Q86Y30 109 aa1.53□□□□□ -2.16
R3HDM1-212ENST00000456040 NAV3Q8IVL0 2385 aa1.53□□□□□ -2.16
R3HDM1-212ENST00000456040 LINC00269Q8N2A0 174 aa1.53□□□□□ -2.16
R3HDM1-212ENST00000456040 Q8N2B8 174 aa1.53□□□□□ -2.16
R3HDM1-212ENST00000456040 Q8TAT8 98 aa1.53□□□□□ -2.16
R3HDM1-212ENST00000456040 KLK9Q9UKQ9 250 aa1.53□□□□□ -2.16
R3HDM1-212ENST00000456040 LENEPQ9Y5L5 61 aa1.53□□□□□ -2.16
R3HDM1-212ENST00000456040 CELSR3Q9NYQ7 3312 aa1.53□□□□□ -2.17
R3HDM1-212ENST00000456040 COL12A1Q99715 3063 aa1.53□□□□□ -2.17
R3HDM1-212ENST00000456040 AKAP6Q13023 2319 aa1.52□□□□□ -2.17
R3HDM1-212ENST00000456040 LAMA5O15230 3695 aa1.52□□□□□ -2.17
R3HDM1-212ENST00000456040 HELZ2Q9BYK8 2649 aaKnown RBP1.52□□□□□ -2.17
R3HDM1-212ENST00000456040 ABCA12Q86UK0 2595 aa1.52□□□□□ -2.17
Retrieved 100 of 20,778 RNA–protein pairs in 11.1 ms