RNA–Protein interactions for RNA: ENST00000455631.5

PTPRA-208, Transcript of protein tyrosine phosphatase, receptor type A, humanhuman

TSL 5

Gene PTPRA, Length 1,107 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRA-208ENST00000455631 SMIM27A0A1W2PRY6 76 aa13.29□□□□□ -0.28
PTPRA-208ENST00000455631 F8W036 122 aa13.29□□□□□ -0.28
PTPRA-208ENST00000455631 ALKAL2Q6UX46 152 aa13.29□□□□□ -0.28
PTPRA-208ENST00000455631 PPBPP02775 128 aa13.28□□□□□ -0.28
PTPRA-208ENST00000455631 MRPL54Q6P161 138 aaKnown RBP13.28□□□□□ -0.28
PTPRA-208ENST00000455631 PNRC1Q12796 327 aaPredicted RBP13.27□□□□□ -0.29
PTPRA-208ENST00000455631 S100A8P05109 93 aa13.26□□□□□ -0.29
PTPRA-208ENST00000455631 SRP19P09132 144 aaKnown RBP13.26□□□□□ -0.29
PTPRA-208ENST00000455631 SRSF3P84103 164 aaKnown RBP13.26□□□□□ -0.29
PTPRA-208ENST00000455631 LINC00337Q8N6G1 96 aa13.26□□□□□ -0.29
PTPRA-208ENST00000455631 VCX2Q9H322 139 aa13.26□□□□□ -0.29
PTPRA-208ENST00000455631 RPL23P62829 140 aaKnown RBP13.25□□□□□ -0.29
PTPRA-208ENST00000455631 ADIRFQ15847 76 aa13.25□□□□□ -0.29
PTPRA-208ENST00000455631 ASB16-AS1Q495Z4 193 aa13.25□□□□□ -0.29
PTPRA-208ENST00000455631 ORMDL3Q8N138 153 aa13.25□□□□□ -0.29
PTPRA-208ENST00000455631 AMELXQ99217 191 aa13.25□□□□□ -0.29
PTPRA-208ENST00000455631 PRLHP81277 87 aa13.24□□□□□ -0.29
PTPRA-208ENST00000455631 TCTE3Q8IZS6 198 aa13.24□□□□□ -0.29
PTPRA-208ENST00000455631 NKAPP1Q8N9T2 125 aa13.24□□□□□ -0.29
PTPRA-208ENST00000455631 CXCL5P42830 114 aa13.23□□□□□ -0.29
PTPRA-208ENST00000455631 PRELID3AQ96N28 172 aa13.23□□□□□ -0.29
PTPRA-208ENST00000455631 CDKN2A-AS1Q9UH64 79 aa13.23□□□□□ -0.29
PTPRA-208ENST00000455631 CYSLTR1Q9Y271 337 aa13.23□□□□□ -0.29
PTPRA-208ENST00000455631 IGKV2-28A0A075B6P5 120 aa13.22□□□□□ -0.29
PTPRA-208ENST00000455631 IGKV2D-28P01615 120 aa13.22□□□□□ -0.29
PTPRA-208ENST00000455631 C2orf66Q6UXQ4 117 aa13.22□□□□□ -0.29
PTPRA-208ENST00000455631 FP248Q71RG6 208 aaPredicted RBP13.22□□□□□ -0.29
PTPRA-208ENST00000455631 C3orf22Q8N5N4 141 aa13.22□□□□□ -0.29
PTPRA-208ENST00000455631 KRTAP4-1Q9BYQ7 146 aa13.22□□□□□ -0.29
PTPRA-208ENST00000455631 LOC389332A0A1B0GUA5 103 aa13.21□□□□□ -0.29
PTPRA-208ENST00000455631 A0A1B0GXF2 115 aa13.21□□□□□ -0.29
PTPRA-208ENST00000455631 HERVK_113P63121 156 aa13.21□□□□□ -0.29
PTPRA-208ENST00000455631 TMEM136Q6ZRR5 245 aa13.21□□□□□ -0.29
PTPRA-208ENST00000455631 IGLV5-37A0A075B6J1 123 aa13.2□□□□□ -0.3
PTPRA-208ENST00000455631 FAM19A3Q7Z5A8 133 aa13.2□□□□□ -0.3
PTPRA-208ENST00000455631 KRTAP13-3Q3SY46 172 aa13.19□□□□□ -0.3
PTPRA-208ENST00000455631 GEMIN7Q9H840 131 aaKnown RBP13.19□□□□□ -0.3
PTPRA-208ENST00000455631 SCO1O75880 301 aa13.18□□□□□ -0.3
PTPRA-208ENST00000455631 FAM19A1Q7Z5A9 133 aa13.18□□□□□ -0.3
PTPRA-208ENST00000455631 SEC11AP67812 179 aa13.17□□□□□ -0.3
PTPRA-208ENST00000455631 SPAG11AQ6PDA7 123 aa13.17□□□□□ -0.3
PTPRA-208ENST00000455631 MAP1LC3AQ9H492 121 aa13.16□□□□□ -0.3
PTPRA-208ENST00000455631 NAT8Q9UHE5 227 aa13.16□□□□□ -0.3
PTPRA-208ENST00000455631 SEC61BP60468 96 aaKnown RBP13.15□□□□□ -0.3
PTPRA-208ENST00000455631 RAB5BP61020 215 aa13.15□□□□□ -0.3
PTPRA-208ENST00000455631 IGIPA6NJ69 53 aa13.14□□□□□ -0.31
PTPRA-208ENST00000455631 NPSP0C0P6 89 aa13.14□□□□□ -0.31
PTPRA-208ENST00000455631 PRSS47A8MTI9 375 aa13.13□□□□□ -0.31
PTPRA-208ENST00000455631 SMIM1B2RUZ4 78 aa13.12□□□□□ -0.31
PTPRA-208ENST00000455631 TMEM238C9JI98 176 aa13.12□□□□□ -0.31
PTPRA-208ENST00000455631 Q8N8P6 123 aa13.12□□□□□ -0.31
PTPRA-208ENST00000455631 COX7B2Q8TF08 81 aa13.12□□□□□ -0.31
PTPRA-208ENST00000455631 PLEKHB2Q96CS7 222 aa13.12□□□□□ -0.31
PTPRA-208ENST00000455631 TMEM126AQ9H061 195 aa13.12□□□□□ -0.31
PTPRA-208ENST00000455631 ORMDL2Q53FV1 153 aa13.11□□□□□ -0.31
PTPRA-208ENST00000455631 C4orf48Q5BLP8 95 aa13.11□□□□□ -0.31
PTPRA-208ENST00000455631 LAMTOR2Q9Y2Q5 125 aa13.11□□□□□ -0.31
PTPRA-208ENST00000455631 PAPPA-AS1Q5QFB9 102 aa13.1□□□□□ -0.31
PTPRA-208ENST00000455631 CBLN2Q8IUK8 224 aa13.09□□□□□ -0.31
PTPRA-208ENST00000455631 PDZD11Q5EBL8 140 aa13.08□□□□□ -0.32
PTPRA-208ENST00000455631 ATP5L2Q7Z4Y8 100 aa13.08□□□□□ -0.32
PTPRA-208ENST00000455631 C9JQL5 133 aa13.06□□□□□ -0.32
PTPRA-208ENST00000455631 HIGD2AQ9BW72 106 aa13.06□□□□□ -0.32
PTPRA-208ENST00000455631 M0R378 163 aa13.05□□□□□ -0.32
PTPRA-208ENST00000455631 TIMM17AQ99595 171 aa13.04□□□□□ -0.32
PTPRA-208ENST00000455631 GNB1LQ9BYB4 327 aa13.04□□□□□ -0.32
PTPRA-208ENST00000455631 K7EMI3 77 aa13.03□□□□□ -0.32
PTPRA-208ENST00000455631 DAND5Q8N907 189 aa13.03□□□□□ -0.32
PTPRA-208ENST00000455631 Q8NBF4 154 aa13.03□□□□□ -0.32
PTPRA-208ENST00000455631 VPREB1P12018 145 aa13.02□□□□□ -0.33
PTPRA-208ENST00000455631 SPRR4Q96PI1 79 aa13.02□□□□□ -0.33
PTPRA-208ENST00000455631 ATP5LO75964 103 aa13.01□□□□□ -0.33
PTPRA-208ENST00000455631 SPINK8P0C7L1 97 aa13.01□□□□□ -0.33
PTPRA-208ENST00000455631 PFN2P35080 140 aa13.01□□□□□ -0.33
PTPRA-208ENST00000455631 TINCRA0A1B0GVN0 87 aa13□□□□□ -0.33
PTPRA-208ENST00000455631 LCE2CQ5TA81 110 aa13□□□□□ -0.33
PTPRA-208ENST00000455631 IGLV5-45A0A087WSX0 123 aa12.99□□□□□ -0.33
PTPRA-208ENST00000455631 NXT2Q9NPJ8 142 aaKnown RBP12.99□□□□□ -0.33
PTPRA-208ENST00000455631 TOMM6Q96B49 74 aa12.98□□□□□ -0.33
PTPRA-208ENST00000455631 G0S2P27469 103 aa12.97□□□□□ -0.33
PTPRA-208ENST00000455631 RPL24P83731 157 aaKnown RBP12.97□□□□□ -0.33
PTPRA-208ENST00000455631 SND1-IT1Q9HBX3 110 aa12.97□□□□□ -0.33
PTPRA-208ENST00000455631 NDUFA12Q9UI09 145 aa12.97□□□□□ -0.33
PTPRA-208ENST00000455631 A0A1B0GVG6 124 aa12.96□□□□□ -0.33
PTPRA-208ENST00000455631 SPINK1P00995 79 aa12.96□□□□□ -0.33
PTPRA-208ENST00000455631 ZNF706Q9Y5V0 76 aaPredicted RBP12.96□□□□□ -0.33
PTPRA-208ENST00000455631 PEA15Q15121 130 aa12.95□□□□□ -0.34
PTPRA-208ENST00000455631 SCGB3A1Q96QR1 104 aa12.95□□□□□ -0.34
PTPRA-208ENST00000455631 RAB14P61106 215 aa12.94□□□□□ -0.34
PTPRA-208ENST00000455631 ERASQ7Z444 233 aa12.94□□□□□ -0.34
PTPRA-208ENST00000455631 AKAP14Q86UN6 197 aa12.94□□□□□ -0.34
PTPRA-208ENST00000455631 CFC1BP0CG36 223 aa12.92□□□□□ -0.34
PTPRA-208ENST00000455631 ADCYAP1P18509 176 aa12.92□□□□□ -0.34
PTPRA-208ENST00000455631 MT1HP80294 61 aa12.92□□□□□ -0.34
PTPRA-208ENST00000455631 Q8NDZ9 215 aa12.92□□□□□ -0.34
PTPRA-208ENST00000455631 XP32Q5T750 250 aa12.91□□□□□ -0.34
PTPRA-208ENST00000455631 ERG28Q9UKR5 140 aa12.9□□□□□ -0.34
PTPRA-208ENST00000455631 H3BRM9 83 aa12.89□□□□□ -0.35
PTPRA-208ENST00000455631 FAM19A2Q8N3H0 131 aa12.89□□□□□ -0.35
PTPRA-208ENST00000455631 MRPL18Q9H0U6 180 aaKnown RBP12.89□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 58 ms