RNA–Protein interactions for RNA: ENST00000455362.1

HMGB1P4-201, Transcript of high mobility group box 1 pseudogene 4, humanhuman

BASIC

Gene HMGB1P4, Length 567 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P4-201ENST00000455362 SCGB1D4Q6XE38 83 aa3.52□□□□□ -1.85
HMGB1P4-201ENST00000455362 SMIM20Q8N5G0 67 aa3.52□□□□□ -1.85
HMGB1P4-201ENST00000455362 DEFB104AQ8WTQ1 72 aa3.52□□□□□ -1.85
HMGB1P4-201ENST00000455362 TMEM101Q96IK0 257 aa3.52□□□□□ -1.85
HMGB1P4-201ENST00000455362 ANAPC13Q9BS18 74 aa3.52□□□□□ -1.85
HMGB1P4-201ENST00000455362 PRADC1Q9BSG0 188 aa3.52□□□□□ -1.85
HMGB1P4-201ENST00000455362 C8orf87E5RJ46 101 aa3.51□□□□□ -1.85
HMGB1P4-201ENST00000455362 LEPROTL1O95214 131 aa3.51□□□□□ -1.85
HMGB1P4-201ENST00000455362 LINC00694P0DN24 101 aa3.51□□□□□ -1.85
HMGB1P4-201ENST00000455362 HTN3P15516 51 aa3.51□□□□□ -1.85
HMGB1P4-201ENST00000455362 Q1RN00 199 aa3.51□□□□□ -1.85
HMGB1P4-201ENST00000455362 Q6ZTC4 211 aa3.51□□□□□ -1.85
HMGB1P4-201ENST00000455362 DAZ4Q86SG3 579 aaKnown RBP3.51□□□□□ -1.85
HMGB1P4-201ENST00000455362 TOMM6Q96B49 74 aa3.51□□□□□ -1.85
HMGB1P4-201ENST00000455362 SIGMAR1Q99720 223 aa3.51□□□□□ -1.85
HMGB1P4-201ENST00000455362 DAZ3Q9NR90 486 aaKnown RBP3.51□□□□□ -1.85
HMGB1P4-201ENST00000455362 HSPB8Q9UJY1 196 aa3.51□□□□□ -1.85
HMGB1P4-201ENST00000455362 A0A087WX48 190 aa3.5□□□□□ -1.85
HMGB1P4-201ENST00000455362 A0A0J9YY99 117 aa3.5□□□□□ -1.85
HMGB1P4-201ENST00000455362 LINC01549A6NIU2 74 aa3.5□□□□□ -1.85
HMGB1P4-201ENST00000455362 C3orf79P0CE67 100 aa3.5□□□□□ -1.85
HMGB1P4-201ENST00000455362 KRTDAPP60985 99 aa3.5□□□□□ -1.85
HMGB1P4-201ENST00000455362 RPL39P62891 51 aaKnown RBP3.5□□□□□ -1.85
HMGB1P4-201ENST00000455362 BATFQ16520 125 aa3.5□□□□□ -1.85
HMGB1P4-201ENST00000455362 NTM-AS1Q6ZSK4 140 aa3.5□□□□□ -1.85
HMGB1P4-201ENST00000455362 C20orf203Q8NBC4 194 aa3.5□□□□□ -1.85
HMGB1P4-201ENST00000455362 ATP6V0E2Q8NHE4 81 aa3.5□□□□□ -1.85
HMGB1P4-201ENST00000455362 MIEN1Q9BRT3 115 aa3.5□□□□□ -1.85
HMGB1P4-201ENST00000455362 CHCHD7Q9BUK0 85 aa3.5□□□□□ -1.85
HMGB1P4-201ENST00000455362 GTSF1LQ9H1H1 148 aa3.5□□□□□ -1.85
HMGB1P4-201ENST00000455362 RBM12B-AS1Q9P1G2 102 aa3.5□□□□□ -1.85
HMGB1P4-201ENST00000455362 CYSLTR1Q9Y271 337 aa3.5□□□□□ -1.85
HMGB1P4-201ENST00000455362 CSMD3Q7Z407 3707 aa3.5□□□□□ -1.85
HMGB1P4-201ENST00000455362 DEFB131BA0A096LNP1 70 aa3.49□□□□□ -1.85
HMGB1P4-201ENST00000455362 IGIPA6NJ69 53 aa3.49□□□□□ -1.85
HMGB1P4-201ENST00000455362 H3BNG1 76 aa3.49□□□□□ -1.85
HMGB1P4-201ENST00000455362 SYS1-DBNDD2H3BUS1 97 aa3.49□□□□□ -1.85
HMGB1P4-201ENST00000455362 K7ERU9 68 aa3.49□□□□□ -1.85
HMGB1P4-201ENST00000455362 SCGB1C2P0DMR2 95 aa3.49□□□□□ -1.85
HMGB1P4-201ENST00000455362 CEMP1Q6PRD7 247 aaPredicted RBP3.49□□□□□ -1.85
HMGB1P4-201ENST00000455362 SH2D6Q7Z4S9 175 aa3.49□□□□□ -1.85
HMGB1P4-201ENST00000455362 SPATA12Q7Z6I5 190 aa3.49□□□□□ -1.85
HMGB1P4-201ENST00000455362 LINC00337Q8N6G1 96 aa3.49□□□□□ -1.85
HMGB1P4-201ENST00000455362 Q8N976 141 aa3.49□□□□□ -1.85
HMGB1P4-201ENST00000455362 IFI27L1Q96BM0 104 aa3.49□□□□□ -1.85
HMGB1P4-201ENST00000455362 SCGB3A1Q96QR1 104 aa3.49□□□□□ -1.85
HMGB1P4-201ENST00000455362 IGKV2D-29A0A075B6S2 120 aaPredicted RBP3.48□□□□□ -1.85
HMGB1P4-201ENST00000455362 A0A096LPF7 62 aa3.48□□□□□ -1.85
HMGB1P4-201ENST00000455362 TRBV6-8A0A0A6YYG3 113 aa3.48□□□□□ -1.85
HMGB1P4-201ENST00000455362 TRAV10A0A0B4J240 114 aa3.48□□□□□ -1.85
HMGB1P4-201ENST00000455362 IGKV2-29A2NJV5 120 aaPredicted RBP3.48□□□□□ -1.85
HMGB1P4-201ENST00000455362 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP3.48□□□□□ -1.85
HMGB1P4-201ENST00000455362 CXCL5P42830 114 aa3.48□□□□□ -1.85
HMGB1P4-201ENST00000455362 NMUP48645 174 aa3.48□□□□□ -1.85
HMGB1P4-201ENST00000455362 UBE2AP49459 152 aa3.48□□□□□ -1.85
HMGB1P4-201ENST00000455362 Q8N9P0 234 aaPredicted RBP3.48□□□□□ -1.85
HMGB1P4-201ENST00000455362 FAM104AQ969W3 186 aa3.48□□□□□ -1.85
HMGB1P4-201ENST00000455362 TMEM141Q96I45 108 aa3.48□□□□□ -1.85
HMGB1P4-201ENST00000455362 TIMM21Q9BVV7 248 aa3.48□□□□□ -1.85
HMGB1P4-201ENST00000455362 ICOSQ9Y6W8 199 aa3.48□□□□□ -1.85
HMGB1P4-201ENST00000455362 PLECQ15149 4684 aaKnown RBP3.47□□□□□ -1.85
HMGB1P4-201ENST00000455362 TRBV25-1A0A075B6N4 114 aa3.47□□□□□ -1.85
HMGB1P4-201ENST00000455362 HIGD2BQ4VC39 106 aa3.47□□□□□ -1.85
HMGB1P4-201ENST00000455362 MPV17L2Q567V2 206 aa3.47□□□□□ -1.85
HMGB1P4-201ENST00000455362 LINC01545Q5VT33 79 aa3.47□□□□□ -1.85
HMGB1P4-201ENST00000455362 LYPD5Q6UWN5 251 aa3.47□□□□□ -1.85
HMGB1P4-201ENST00000455362 CAMK2N2Q96S95 79 aa3.47□□□□□ -1.85
HMGB1P4-201ENST00000455362 SPANXA1Q9NS26 97 aa3.47□□□□□ -1.85
HMGB1P4-201ENST00000455362 UBE2D4Q9Y2X8 147 aa3.47□□□□□ -1.85
HMGB1P4-201ENST00000455362 VPS13DQ5THJ4 4388 aa3.47□□□□□ -1.85
HMGB1P4-201ENST00000455362 TRAV12-1A0A0B4J245 112 aa3.46□□□□□ -1.86
HMGB1P4-201ENST00000455362 FGF6P10767 208 aa3.46□□□□□ -1.86
HMGB1P4-201ENST00000455362 MP68P56378 58 aa3.46□□□□□ -1.86
HMGB1P4-201ENST00000455362 MRPS36P82909 103 aaKnown RBP3.46□□□□□ -1.86
HMGB1P4-201ENST00000455362 LELP1Q5T871 98 aa3.46□□□□□ -1.86
HMGB1P4-201ENST00000455362 ZC2HC1BQ5TFG8 222 aa3.46□□□□□ -1.86
HMGB1P4-201ENST00000455362 LGALS9CQ6DKI2 356 aa3.46□□□□□ -1.86
HMGB1P4-201ENST00000455362 PMCHL2Q9BQD1 86 aa3.46□□□□□ -1.86
HMGB1P4-201ENST00000455362 ERG28Q9UKR5 140 aa3.46□□□□□ -1.86
HMGB1P4-201ENST00000455362 IGLL5B9A064 214 aa3.45□□□□□ -1.86
HMGB1P4-201ENST00000455362 TMEM262E9PQX1 116 aa3.45□□□□□ -1.86
HMGB1P4-201ENST00000455362 TAX1BP3O14907 124 aa3.45□□□□□ -1.86
HMGB1P4-201ENST00000455362 UBE2L6O14933 153 aa3.45□□□□□ -1.86
HMGB1P4-201ENST00000455362 ESRGQ1W209 222 aa3.45□□□□□ -1.86
HMGB1P4-201ENST00000455362 AMMECR1LQ6DCA0 310 aa3.45□□□□□ -1.86
HMGB1P4-201ENST00000455362 CEND1Q8N111 149 aa3.45□□□□□ -1.86
HMGB1P4-201ENST00000455362 C15orf53Q8NAA6 179 aa3.45□□□□□ -1.86
HMGB1P4-201ENST00000455362 OR5A1Q8NGJ0 315 aa3.45□□□□□ -1.86
HMGB1P4-201ENST00000455362 AMELXQ99217 191 aa3.45□□□□□ -1.86
HMGB1P4-201ENST00000455362 CDC42SE2Q9NRR3 84 aa3.45□□□□□ -1.86
HMGB1P4-201ENST00000455362 MRPL35Q9NZE8 188 aaKnown RBP3.45□□□□□ -1.86
HMGB1P4-201ENST00000455362 IGLV4-60A0A075B6I1 120 aa3.44□□□□□ -1.86
HMGB1P4-201ENST00000455362 IGLV1-50A0A075B6I6 118 aa3.44□□□□□ -1.86
HMGB1P4-201ENST00000455362 F8VRH5 84 aa3.44□□□□□ -1.86
HMGB1P4-201ENST00000455362 DPM2O94777 84 aa3.44□□□□□ -1.86
HMGB1P4-201ENST00000455362 PMAIP1Q13794 54 aa3.44□□□□□ -1.86
HMGB1P4-201ENST00000455362 RNASE13Q5GAN3 156 aaKnown RBP3.44□□□□□ -1.86
HMGB1P4-201ENST00000455362 Q6ZUT4 128 aa3.44□□□□□ -1.86
HMGB1P4-201ENST00000455362 ATOH7Q8N100 152 aa3.44□□□□□ -1.86
HMGB1P4-201ENST00000455362 CHAC1Q9BUX1 264 aa3.44□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 10.6 ms